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Expression of Cp4.1LG12g04440 [Cucurbita pepo (MU-CU-16) v4.1]

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PRJNA838740: Transcriptome profiling of fruit exocarp treated with ABA and then stored in cold (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN28462261 Cucurbita pepo subsp. pepo Sinatra Exocarp of fruit submerged in distilled water, desiccated for 2 h and then stored in cold for 1 d 6.57
SAMN28462252 Cucurbita pepo subsp. pepo Sinatra Exocarp of fruit submerged in 0.5 mM of ABA, desiccated for 2 h and then stored in cold for 1 d 5.52
SAMN28462264 Cucurbita pepo subsp. pepo Sinatra Exocarp of fruit submerged in distilled water, desiccated for 2 h and then stored in cold for 5 d 11.03
SAMN28462255 Cucurbita pepo subsp. pepo Sinatra Exocarp of fruit submerged in 0.5 mM of ABA, desiccated for 2 h and then stored in cold for 5 d 10.69
SAMN28462258 Cucurbita pepo subsp. pepo Sinatra Exocarp of fruit submerged in distilled water, desiccated for 2 h and then stored in cold for 14 d 12.53
SAMN28462249 Cucurbita pepo subsp. pepo Sinatra Exocarp of fruit submerged in 0.5 mM of ABA, desiccated for 2 h and then stored in cold for 14 d 12.73
SAMN28462267 Cucurbita pepo subsp. pepo Sinatra Exocarp of freshly harvested fruit 4.15
PRJNA726825: Transcriptome responses to copper oxide (CuO) nanoparticles (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN18962951 Cucurbita pepo Costata Romanesco Pollen from zucchini grown in pot soil for 60 days 3.08
SAMN18962960 Cucurbita pepo Costata Romanesco Pollen from zucchini grown in pot soil for 60 days, with addition of CuSO4 5H2O (320 mg kg-1) 1.49
SAMN18962949 Cucurbita pepo Costata Romanesco Pollen from zucchini grown in pot soil for 60 days, with addition of CuO raw material (100 mg kg-1) 2.1
SAMN18962950 Cucurbita pepo Costata Romanesco Pollen from zucchini grown in pot soil for 60 days, with addition of CuO nanoparticles (100 mg kg-1) 3.18
SAMN18962955 Cucurbita pepo Costata Romanesco Leaf from zucchini grown in pot soil for 60 days 7.78
SAMN18962952 Cucurbita pepo Costata Romanesco Leaf from zucchini grown in pot soil for 60 days, with addition of CuSO4 5H2O (320 mg kg-1) 6.03
SAMN18962953 Cucurbita pepo Costata Romanesco Leaf from zucchini grown in pot soil for 60 days, with addition of CuO raw material (100 mg kg-1) 8.66
SAMN18962954 Cucurbita pepo Costata Romanesco Leaf from zucchini grown in pot soil for 60 days, with addition of CuO nanoparticles (100 mg kg-1) 5.68
SAMN18962959 Cucurbita pepo Costata Romanesco Root from zucchini grown in pot soil for 60 days 11.26
SAMN18962956 Cucurbita pepo Costata Romanesco Root from zucchini grown in pot soil for 60 days, with addition of CuSO4 5H2O (320 mg kg-1) 9.28
SAMN18962957 Cucurbita pepo Costata Romanesco Root from zucchini grown in pot soil for 60 days, with addition of CuO raw material (100 mg kg-1) 11.57
SAMN18962958 Cucurbita pepo Costata Romanesco Root from zucchini grown in pot soil for 60 days, with addition of CuO nanoparticles (100 mg kg-1) 12.09
PRJNA439198: Transcriptome responses to Aphis gossypii feeding (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08742113 Cucurbita pepo subsp. pepo San Pasquale Leaf of uninfested zucchini plant at 24h 6.02
SAMN08742104 Cucurbita pepo subsp. pepo San Pasquale Leaf of infested zucchini plant after 24h of Aphis gossypii feeding 5.3
SAMN08742116 Cucurbita pepo subsp. pepo San Pasquale Leaf of uninfested zucchini plant at 48h 5.9
SAMN08742107 Cucurbita pepo subsp. pepo San Pasquale Leaf of infested zucchini plant after 48h of Aphis gossypii feeding 5.55
SAMN08742119 Cucurbita pepo subsp. pepo San Pasquale Leaf of uninfested zucchini plant at 96h 5.24
SAMN08742110 Cucurbita pepo subsp. pepo San Pasquale Leaf of infested zucchini plant after 96h of Aphis gossypii feeding 4.48
PRJNA669995: Transcriptome responses to ZYMV (strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN16474370 Cucurbita pepo True French Leaf of susceptible line at 12 days post inoculation of ZYMV 4.56
SAMN16474372 Cucurbita pepo 381e Leaf of resistant line at 12 days post inoculation of ZYMV 3.83
PRJNA339848: Comparative transcriptome analysis of fruit development in acorn squash and oilseed pumpkin (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN05608084 Cucurbita pepo Lady Godiva Fruit mesocarp at 5 days after pollination 9.32
SAMN05608086 Cucurbita pepo Lady Godiva Fruit mesocarp at 10 days after pollination 14.16
SAMN05608088 Cucurbita pepo Lady Godiva Fruit mesocarp at 15 days after pollination 13.49
SAMN05608090 Cucurbita pepo Lady Godiva Fruit mesocarp at 20 days after pollination 9.67
SAMN05608092 Cucurbita pepo Lady Godiva Fruit mesocarp at 40 days after pollination 8.01
SAMN05608094 Cucurbita pepo Sweet REBA Fruit mesocarp at 5 days after pollination 13.47
SAMN05608096 Cucurbita pepo Sweet REBA Fruit mesocarp at 10 days after pollination 14.05
SAMN05608098 Cucurbita pepo Sweet REBA Fruit mesocarp at 15 days after pollination 10.82
SAMN05608100 Cucurbita pepo Sweet REBA Fruit mesocarp at 20 days after pollination 9.96
SAMN05608102 Cucurbita pepo Sweet REBA Fruit mesocarp at 40 days after pollination 10.27
SAMN05608085 Cucurbita pepo Lady Godiva Seed at 5 days after pollination 9.88
SAMN05608087 Cucurbita pepo Lady Godiva Seed at 10 days after pollination 11.6
SAMN05608089 Cucurbita pepo Lady Godiva Seed at 15 days after pollination 9.83
SAMN05608091 Cucurbita pepo Lady Godiva Seed at 20 days after pollination 10.56
SAMN05608093 Cucurbita pepo Lady Godiva Seed at 40 days after pollination 9.41
SAMN05608095 Cucurbita pepo Sweet REBA Seed at 5 days after pollination 10.82
SAMN05608097 Cucurbita pepo Sweet REBA Seed at 10 days after pollination 10.66
SAMN05608099 Cucurbita pepo Sweet REBA Seed at 15 days after pollination 9.33
SAMN05608101 Cucurbita pepo Sweet REBA Seed at 20 days after pollination 8.59
SAMN05608103 Cucurbita pepo Sweet REBA Seed at 40 days after pollination 12.02
PRJNA499783: PRJNA499783Fruit transcriptomes of parthenocarpic and non-parthenocarpic cultivars (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN10345060 Cucurbita pepo MUCU-16 Unpollinated fruit of non-parthenocarpic cultivar 6.88
SAMN10345061 Cucurbita pepo MUCU-16 Pollinated fruit of non-parthenocarpic cultivar 13.03
SAMN10345062 Cucurbita pepo MUCU-16 Auxin treated fruit of non-parthenocarpic cultivar 9.18
SAMN10345063 Cucurbita pepo Whitaker Unpollinated fruit of parthenocarpic cultivar 6.98
SAMN10345064 Cucurbita pepo Whitaker Pollinated fruit of parthenocarpic cultivar 12.96
SAMN10345065 Cucurbita pepo Whitaker Auxin treated fruit of parthenocarpic cultivar 9.07
PRJNA386743: Transcriptomes of young leaves from different Cucurbita lines (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN07224650 Cucurbita pepo CATIE-11368 Young leaves 3.46
SAMN07224653 Cucurbita pepo CATIE-18887 Young leaves 3.94
SAMN07224674 Cucurbita pepo PI 532354 Young leaves 4.71
SAMN07224680 Cucurbita pepo PI 614701 Young leaves 2.39
SAMN07224681 Cucurbita pepo PI 615111 Young leaves 3.93
PRJNA663796: Transcriptome profiling of different squash tissues (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN16179729 Cucurbita pepo Kompokolokytho Fruit at 2 days after pollination 11.13
SAMN16179730 Cucurbita pepo Kompokolokytho Fruit at 7 days after pollination 11.89
SAMN16179731 Cucurbita pepo Kompokolokytho Fruit at 10 days after pollination 9.34
SAMN16179732 Cucurbita pepo Kompokolokytho Fruit at 15 days after pollination 11.38
SAMN16179733 Cucurbita pepo Kompokolokytho Fruit at 20 days after pollination 9.12
SAMN16179734 Cucurbita pepo Kompokolokytho Fruit at 30 days after pollination 7.7
SAMN16179735 Cucurbita pepo Kompokolokytho Fruit at 40 days after pollination 8.78
SAMN16179722 Cucurbita pepo Kompokolokytho Seed 9.2
SAMN16179723 Cucurbita pepo Kompokolokytho Shoot 11.22
SAMN16179724 Cucurbita pepo Kompokolokytho Stem 16.54
SAMN16179725 Cucurbita pepo Kompokolokytho Young leaf 10.45
SAMN16179726 Cucurbita pepo Kompokolokytho Developed leaf 8.25
SAMN16179727 Cucurbita pepo Kompokolokytho Male flower 3.4
SAMN16179728 Cucurbita pepo Kompokolokytho Female flower 12.83
SAMN16179736 Cucurbita pepo Kompokolokytho Primary root 10.52
SAMN16179737 Cucurbita pepo Kompokolokytho Lateral root 9.02
PRJNA437911: Transcriptomes of female and male nectaries at different stages of floral maturation (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08687067 Cucurbita pepo NA Male nectaries at full anthesis, 2-3 hr after dawn (secretory) 0.77
SAMN08687100 Cucurbita pepo NA Male nectaries at 9 hr after the 'secretory' stage 1.89
SAMN08687068 Cucurbita pepo NA Male nectaries at 15 hr prior to anthesis (nectar secretion) 2.2
SAMN08687071 Cucurbita pepo NA Male nectaries at 24 hr prior to anthesis (nectar secretion) 2.49
SAMN08687077 Cucurbita pepo NA Female nectaries at full anthesis, 2-3 hr after dawn (secretory) 0.93
SAMN08687074 Cucurbita pepo NA Female nectaries at 9 hr after the 'secretory' stage 2.45
SAMN08687080 Cucurbita pepo NA Female nectaries at 15 hr prior to anthesis (nectar secretion) 3.12
SAMN08687082 Cucurbita pepo NA Female nectaries at 24 hr prior to anthesis (nectar secretion) 13.14
PRJNA752874: Seed coat transcriptome of hulled and hulless ecotypes (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN20665548 Cucurbita pepo NA Seed coat of hulled ecotype at 8 days after pollination 6.65
SAMN20665551 Cucurbita pepo NA Seed coat of hulled ecotype at 18 days after pollination 8.9
SAMN20665554 Cucurbita pepo NA Seed coat of hulled ecotype at 28 days after pollination 6.08
SAMN20665557 Cucurbita pepo NA Seed coat of hulless ecotype at 8 days after pollination 8.55
SAMN20665560 Cucurbita pepo NA Seed coat of hulless ecotype at 18 days after pollination 10.22
SAMN20665563 Cucurbita pepo NA Seed coat of hulless ecotype at 28 days after pollination 9.53
PRJNA843470: Seed coat transcriptome of hulled and hulless ecotypes (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN28743097 Cucurbita pepo H hulled seed coat at 5 days after pollination 6.43
SAMN28743088 Cucurbita pepo HL hulled-less seed coat at 5 days after pollination 6.56
SAMN28743094 Cucurbita pepo H hulled seed coat at 10 days after pollination 12.16
SAMN28743085 Cucurbita pepo HL hulled-less seed coat at 10 days after pollination 6.59
SAMN28743091 Cucurbita pepo H hulled seed coat at 20 days after pollination 9.26
SAMN28743082 Cucurbita pepo HL hulled-less seed coat at 20 days after pollination 10.9