; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Expression of CsGy6G012300 [Cucumber (Gy14) v2.1]

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PRJNA376073: Transcriptome responses to GA3 (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SRX2577785 Cucumis sativus 13_3B Shoot apices without GA3 treatment 46.55
SRX2577783 Cucumis sativus 13_3B Shoot apices treated with GA3 for 6 h 66.42
SRX2577781 Cucumis sativus 13_3B Shoot apices treated with GA3 for 12 h 85.9
PRJNA613788: Transcriptome response to sugar treatment (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN14419958 Cucumis sativus ZK Non-pollinated fruit 265.7
SAMN14419952 Cucumis sativus ZK Fruit at one day after anthesis treated with fructose 245.53
SAMN14419954 Cucumis sativus ZK Fruit at one day after anthesis treated with glucose 133.78
SAMN14419956 Cucumis sativus ZK Fruit at one day after anthesis treated with sucrose 299.62
PRJNA667293: Transcriptome profiling of lateral root development regulated by GA3 (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN16365205 Cucumis sativus Daqingba Roots of seedlings with mock treatment at 2 days after germination 19.45
SAMN16365207 Cucumis sativus Daqingba Roots of seedlings treated with 50 uM GA3 at 2 days after germination 20.11
SAMN16365210 Cucumis sativus Daqingba Roots of seedlings with mock treatment at 3 days after germination 27.07
SAMN16365213 Cucumis sativus Daqingba Roots of seedlings treated with 50 uM GA3 at 3 days after germination 31.73
SAMN16365216 Cucumis sativus Daqingba Roots of seedlings with mock treatment at 5 days after germination 49.67
SAMN16365219 Cucumis sativus Daqingba Roots of seedlings treated with 50 uM GA3 at 5 days after germination 62.87
PRJNA782544: Transcriptome responses to ethrel (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN23383751 Cucumis sativus Xinchun No. 4 Explants treated with 0.5 uM ethrel for 48 hours 444.75
SAMN23383748 Cucumis sativus Xinchun No. 4 Explants treated with distilled water for 48 hours 374.73
PRJNA316747: Transcriptomes of cucumber roots inoculated by AMF (Rhizophagus irregularis) under low temperature (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04589924 Cucumis sativus Zhongnong No. 26 Root of non-inoculated plant under normal temperature 100.59
SAMN04589926 Cucumis sativus Zhongnong No. 26 Root of plant inoculated with AMF R. irregularis under normal temperature 72.57
SAMN04589925 Cucumis sativus Zhongnong No. 26 Root of non-inoculated plant under low temperature 54.68
SAMN04589927 Cucumis sativus Zhongnong No. 26 Root of plant inoculated with AMF R. irregularis under low temperature 64.1
PRJNA438923: Transcriptome responses to chilling stress (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08731966 Cucumis sativus Cu-01 Leaves of untreated plants 180.19
SAMN08731973 Cucumis sativus Cu-01 Leaves of plants exposed to an air temperature of 6℃ for 2 h 191.28
SAMN08731970 Cucumis sativus Cu-01 Leaves of plants exposed to an air temperature of 6℃ for 6 h 166.88
SAMN08731967 Cucumis sativus Cu-01 Leaves of plants exposed to an air temperature of 6℃ for 12 h 148.37
PRJNA701131: Transcriptome responses of grafted cucumber to cold stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN17848873 Cucumis sativus Jinyou 35 Leaves of cucumber grafted on pumpkin under normal temperature (25 ℃) 136.23
SAMN17848870 Cucumis sativus Jinyou 35 Leaves of homografted cucumber under normal temperature (25 ℃) 130.51
SAMN17848879 Cucumis sativus Jinyou 35 Leaves of cucumber grafted on pumpkin under cold temperature (5 ℃) 132.1
SAMN17848876 Cucumis sativus Jinyou 35 Leaves of homografted cucumber under cold temperature (5 ℃) 302.89
PRJNA817708: Transcriptome responses to cold stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN26806305 Cucumis sativus CT90 Leaf of tolerant line at 24h after cold treatment of 6 C 75.09
SAMN26806311 Cucumis sativus CT57 Leaf of sensitive line at 24h after cold treatment of 6 C 147.59
SAMN26806308 Cucumis sativus CT90 Root of tolerant line at 24h after cold treatment of 6 C 73.53
SAMN26806314 Cucumis sativus CT57 Root of sensitive line at 24h after cold treatment of 6 C 112.12
PRJNA720243: Transcriptome response of grafted cucumber to drought stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN18643059 Cucumis sativus EC1 Leaf of homografted cucumber plant under control conditions 34.65
SAMN18643060 Cucumis sativus EC1 Leaf of homografted cucumber plant under drought stress 28.4
SAMN18643061 Cucumis sativus EC1 Leaf of cucumber plant grafted onto Cucurbits moschata under control conditions 46.98
SAMN18643062 Cucumis sativus EC1 Leaf of cucumber plant grafted onto Cucurbits moschata under drought stress 43.45
PRJEB7612: Transcriptome response to silicon treatment (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMEA3105050 Cucumis sativus B10 Leaves and stems of untreated plants 197.91
SAMEA3105054 Cucumis sativus B10 Leaves and stems of plants under silicon treatment 200.48
PRJNA307279: Transcriptome profiles of grafted plants under Pi stress (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04457411 Cucumis sativus Chinese Long Developing leaf of homo-grafted cucumber plants (with mature leaves removed) under +Pi for 24 h 63.98
SAMN04457412 Cucumis sativus Chinese Long Developing leaf of homo-grafted cucumber plants (with mature leaves removed) under -Pi for 24 h 58.57
SAMN04457417 Cucumis sativus Chinese Long Developing leaf of homo-grafted cucumber plants under +Pi for 24 h 63.92
SAMN04457418 Cucumis sativus Chinese Long Developing leaf of homo-grafted cucumber plants under -Pi for 24 h 55.26
SAMN04457423 Cucumis sativus Chinese Long Developing leaf of non-grafted cucumber plants under +Pi for 24 h 44.09
SAMN04457424 Cucumis sativus Chinese Long Developing leaf of non-grafted cucumber plants under -Pi for 24 h 57.15
SAMN04457413 Cucumis sativus Chinese Long Shoot apex of homo-grafted cucumber plants (with mature leaves removed) under +Pi for 24 h 44.95
SAMN04457414 Cucumis sativus Chinese Long Shoot apex of homo-grafted cucumber plants (with mature leaves removed) under -Pi for 24 h 43.72
SAMN04457419 Cucumis sativus Chinese Long Shoot apex of homo-grafted cucumber plants under +Pi for 24 h 41.56
SAMN04457420 Cucumis sativus Chinese Long Shoot apex of homo-grafted cucumber plants under -Pi for 24 h 34.01
SAMN04457425 Cucumis sativus Chinese Long Shoot apex of non-grafted cucumber plants under +Pi for 24 h 29.35
SAMN04457426 Cucumis sativus Chinese Long Shoot apex of non-grafted cucumber plants under -Pi for 24 h 31.73
SAMN04457415 Cucumis sativus Chinese Long Root of homo-grafted cucumber plants (with stock leaves removed) under +Pi for 24 h 16.81
SAMN04457416 Cucumis sativus Chinese Long Root of homo-grafted cucumber plants (with stock leaves removed) under -Pi for 24 h 19.17
SAMN04457421 Cucumis sativus Chinese Long Root of homo-grafted cucumber plants under +Pi for 24 h 18.34
SAMN04457422 Cucumis sativus Chinese Long Root of homo-grafted cucumber plants under -Pi for 24 h 17.55
SAMN04457427 Cucumis sativus Chinese Long Root of non-grafted cucumber plants under +Pi for 24 h 21.33
SAMN04457428 Cucumis sativus Chinese Long Root of non-grafted cucumber plants under -Pi for 24 h 24.57
SAMN04457397 Cucumis sativus Chinese long Lamina under +Pi for 12 h 136.93
SAMN04457398 Cucumis sativus Chinese long Lamina under -Pi for 12 h 113.89
SAMN04457399 Cucumis sativus Chinese long Major vein under +Pi for 12 h 280.13
SAMN04457400 Cucumis sativus Chinese long Major vein under -Pi for 12 h 260.18
SAMN04457401 Cucumis sativus Chinese long Petiole vascular tissue under +Pi for 12 h 122.69
SAMN04457402 Cucumis sativus Chinese long Petiole vascular tissue under -Pi for 12 h 148.69
SAMN04457403 Cucumis sativus Chinese long Phloem sap under +Pi for 12 h 14.96
SAMN04457404 Cucumis sativus Chinese long Phloem sap under -Pi for 12 h 26.5
SAMN04457405 Cucumis sativus Chinese long Internode vascular tissue under +Pi for 12 h 87.59
SAMN04457406 Cucumis sativus Chinese long Internode vascular tissue under -Pi for 12 h 71.04
SAMN04457407 Cucumis sativus Chinese long Shoot apex under +Pi for 12 h 13.62
SAMN04457408 Cucumis sativus Chinese long Shoot apex under -Pi for 12 h 19.17
SAMN04457409 Cucumis sativus Chinese long Root under +Pi for 12 h 14.72
SAMN04457410 Cucumis sativus Chinese long Root under -Pi for 12 h 20.97
PRJNA523714: Transcriptome profiling of C. campestris-connected cucumber plant clusters under nitrogen-depleted condition (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN10987397 Cucumis sativus Summer Strong Leaves of plants under homogeneous N-replete condition (both cucumber plants supplied with 10 mM KNO3) after 0 hour 112.16
SAMN10987421 Cucumis sativus Summer Strong Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 2 hours 118.3
SAMN10987445 Cucumis sativus Summer Strong Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 8 hours 89.56
SAMN10987469 Cucumis sativus Summer Strong Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 48 hours 97.42
SAMN10987406 Cucumis sativus Summer Strong Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 2 hours 60.23
SAMN10987430 Cucumis sativus Summer Strong Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 8 hours 98.35
SAMN10987454 Cucumis sativus Summer Strong Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 48 hours 132.87
SAMN10987415 Cucumis sativus Summer Strong Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 2 hours 115.95
SAMN10987439 Cucumis sativus Summer Strong Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 8 hours 122.82
SAMN10987463 Cucumis sativus Summer Strong Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 48 hours 88.81
SAMN10987400 Cucumis sativus Summer Strong Roots of plants under homogeneous N-replete condition (both cucumber plants supplied with 10 mM KNO3) after 0 hour 45.17
SAMN10987424 Cucumis sativus Summer Strong Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 2 hours 25.36
SAMN10987448 Cucumis sativus Summer Strong Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 8 hours 20.29
SAMN10987472 Cucumis sativus Summer Strong Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 48 hours 43.48
SAMN10987409 Cucumis sativus Summer Strong Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 2 hours 38.04
SAMN10987433 Cucumis sativus Summer Strong Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 8 hours 19.39
SAMN10987457 Cucumis sativus Summer Strong Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 48 hours 27.02
SAMN10987418 Cucumis sativus Summer Strong Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 2 hours 48.04
SAMN10987442 Cucumis sativus Summer Strong Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 8 hours 26.82
SAMN10987466 Cucumis sativus Summer Strong Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 48 hours 35.64
PRJNA765376: Transcriptome responses to Sulfur (S) fumigation (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN21555952 Cucumis sativus Chinese Long Non sulfur-fumigated ovaries at 0 days post pollination 361.33
SAMN21555953 Cucumis sativus Chinese Long Sulfur-fumigated ovaries at 0 days post pollination 100.36
SAMN21555954 Cucumis sativus Chinese Long Non sulfur-fumigated commercial fruits at 12 days post pollination 275.66
SAMN21555955 Cucumis sativus Chinese Long Sulfur-fumigated commercial fruits at 12 days post pollination 115.99
SAMN21555950 Cucumis sativus Chinese Long Non sulfur-fumigated mature leaves 162.85
SAMN21555951 Cucumis sativus Chinese Long Sulfur-fumigated mature leaves 238.14
SAMN21555948 Cucumis sativus Chinese Long Non sulfur-fumigated young leaves 165.44
SAMN21555949 Cucumis sativus Chinese Long Sulfur-fumigated young leaves 141.05
PRJNA634519: Transcriptome response to high temperature stress (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN14998224 Cucumis sativus Chinese Long Leaves of untreated plants 61.79
SAMN14998221 Cucumis sativus Chinese Long Leaves of plants under heat treatment at 42℃ for 3 hours 75.05
SAMN14998218 Cucumis sativus Chinese Long Leaves of plants under heat treatment at 42℃ for 6 hours 60.21
PRJNA748460: Transcriptome profiling of male flower development under heat stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN20335859 Cucumis sativus B80 Anthers of male flowers with lengths of 0-3 mm under normal conditions 667.86
SAMN20335871 Cucumis sativus B80 Anthers of male flowers with lengths of 0-3 mm under heat stress 361.22
SAMN20335862 Cucumis sativus B80 Anthers of male flowers with lengths of 3-6 mm under normal conditions 176.55
SAMN20335874 Cucumis sativus B80 Anthers of male flowers with lengths of 3-6 mm under heat stress 96.02
SAMN20335865 Cucumis sativus B80 Anthers of male flowers with lengths of 6-9 mm under normal conditions 49.08
SAMN20335877 Cucumis sativus B80 Anthers of male flowers with lengths of 6-9 mm under heat stress 74.84
SAMN20335868 Cucumis sativus B80 Anthers of male flowers with lengths of >9 mm under normal conditions 182.9
SAMN20335880 Cucumis sativus B80 Anthers of male flowers with lengths of >9 mm under heat stress 189.41
PRJNA380322: Transcriptome responses to temperature and photoperiod (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN06640661 Cucumis sativus Chinese Long Shoot apices from seedlings under low temperature, short day 33.68
SAMN06640663 Cucumis sativus Chinese Long Shoot apices from seedlings under high temperature, short day 59.58
SAMN06640662 Cucumis sativus Chinese Long Shoot apices from seedlings under low temperature, long day 25.41
SAMN06640664 Cucumis sativus Chinese Long Shoot apices from seedlings under high temperature, long day 27.3
PRJNA475903: Transcriptome responses to photoperiod treatment (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN09405568 Cucumis sativus SWCC8 Leaves of plant at 0 day of photoperiod treatment 139.19
SAMN09405577 Cucumis sativus SWCC8 Leaves (mixed) of plants at 7, 14 and 21 days of equal-day treatment 60.46
SAMN09405571 Cucumis sativus SWCC8 Leaves (mixed) of plants at 7, 14 and 21 days of short-day treatment 55.39
SAMN09405580 Cucumis sativus SWCC8 Leaves (mixed) of plants at 37 and 44 days of equal-day treatment 110.16
SAMN09405574 Cucumis sativus SWCC8 Leaves (mixed) of plants at 37 and 44 days of short-day treatment 86.56
SAMN09405583 Cucumis sativus SWCC8 Leaves (mixed) of plants at 52 and 59 days of equal-day treatment 120.51
PRJNA476021: Transcriptome responses to different ratios of blue and red light (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN09425165 Cucumis sativus Huaqing No. 5 Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 5 days 42.09
SAMN09425169 Cucumis sativus Huaqing No. 5 Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 10 days 139.58
SAMN09425173 Cucumis sativus Huaqing No. 5 Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 15 days 89.28
SAMN09425167 Cucumis sativus Huaqing No. 5 Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 5 days 59.45
SAMN09425171 Cucumis sativus Huaqing No. 5 Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 10 days 153.05
SAMN09425175 Cucumis sativus Huaqing No. 5 Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 15 days 153.82
PRJNA782229: Transcriptome profiling of fruit development under different photoperiod treatment (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SRX13518806 Cucumis sativus CC3 Fruits at 10 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) 625.42
SRX13518810 Cucumis sativus CC3 Fruits at 10 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) 521.07
SRX13518829 Cucumis sativus CC3 Fruits at 20 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) 516.72
SRX13518813 Cucumis sativus CC3 Fruits at 20 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) 816.39
SRX13518850 Cucumis sativus CC3 Fruits at 30 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) 974.16
SRX13518816 Cucumis sativus CC3 Fruits at 30 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) 259.2
SRX13518808 Cucumis sativus CC3 Fruits at 40 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) 540.06
SRX13518820 Cucumis sativus CC3 Fruits at 40 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) 470.59
SRX13518823 Cucumis sativus SWCC8 Fruits at 10 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) 1040.02
SRX13518836 Cucumis sativus SWCC8 Fruits at 10 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) 168.57
SRX13518826 Cucumis sativus SWCC8 Fruits at 20 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) 1174.88
SRX13518839 Cucumis sativus SWCC8 Fruits at 20 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) 1414.7
SRX13518830 Cucumis sativus SWCC8 Fruits at 30 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) 1408.64
SRX13518843 Cucumis sativus SWCC8 Fruits at 30 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) 943.41
SRX13518833 Cucumis sativus SWCC8 Fruits at 40 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) 928.11
SRX13518846 Cucumis sativus SWCC8 Fruits at 40 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) 780.46
PRJNA437579: Root transcriptome responses to salt stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08668092 Cucumis sativus Jinchun No. 2 Fresh root apexes (0-2 mm from the root tip) from seedlings without NaCl treatment 9.15
SAMN08668098 Cucumis sativus Jinchun No. 2 Fresh root apexes (0-2 mm from the root tip) from seedlings after 24 hours treatment with 75 mM NaCl 41.68
PRJNA477930: Transcriptome responses to salt stress and silicon treatment (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN09487602 Cucumis sativus JinYou 1 Leaves of untreated plants 109.93
SAMN09487597 Cucumis sativus JinYou 1 Leaves of plants treated with silicon for three days 213.58
SAMN09487599 Cucumis sativus JinYou 1 Leaves of plants treated with salt for three days 138.65
SAMN09487594 Cucumis sativus JinYou 1 Leaves of plants treated with salt and silicon for three days 243.9
PRJNA511946: Transcriptome response to salt stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN10653474 Cucumis sativus JinYou 1 Roots of non-stressed plants 15.56
SAMN10653467 Cucumis sativus JinYou 1 Roots of plants under salt stress for 3 days 21.83
PRJNA524275: Transcriptome profiling of C. campestris-connected cucumber plant clusters under salt stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN11020240 Cucumis sativus Jinyou 35 Leaves, both cucumber plants were mock treated for 12/24 h 81.79
SAMN11020243 Cucumis sativus Jinyou 35 Leaves of plant treated with 50 mM NaCl for 12 h, while the other was mock treated 169.44
SAMN11020246 Cucumis sativus Jinyou 35 Leaves of mock treated plant, while the other was treated with 50 mM NaCl for 12 h 108.15
SAMN11020249 Cucumis sativus Jinyou 35 Leaves, both cucumber plants treated with 50 mM NaCl for 12 h 137.01
SAMN11020252 Cucumis sativus Jinyou 35 Leaves of plant treated with 50 mM NaCl for 24 h, while the other was mock treated 129.12
SAMN11020255 Cucumis sativus Jinyou 35 Leaves of mock treated plant, while the other was treated with 50 mM NaCl for 24 h 137.61
SAMN11020258 Cucumis sativus Jinyou 35 Leaves, both cucumber plants treated with 50 mM NaCl for 24 h 182.04
SAMN11020261 Cucumis sativus Jinyou 35 Roots, both cucumber plants were mock treated for 12/24 h 24.12
SAMN11020264 Cucumis sativus Jinyou 35 Roots of plant treated with 50 mM NaCl for 12 h, while the other was mock treated 20.2
SAMN11020267 Cucumis sativus Jinyou 35 Roots of mock treated plant, while the other was treated with 50 mM NaCl for 12 h 23.29
SAMN11020270 Cucumis sativus Jinyou 35 Roots, both cucumber plants treated with 50 mM NaCl for 12 h 21.32
SAMN11020273 Cucumis sativus Jinyou 35 Roots of plant treated with 50 mM NaCl for 24 h, while the other was mock treated 26.83
SAMN11020276 Cucumis sativus Jinyou 35 Roots of mock treated plant, while the other was treated with 50 mM NaCl for 24 h 33.95
SAMN11020279 Cucumis sativus Jinyou 35 Roots, both cucumber plants treated with 50 mM NaCl for 24 h 39.51
PRJNA563457: Transcriptome responses to H2S-regulated salt stress (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN12674486 Cucumis sativus Chunxiaqiuwang Leaves of untreated plants 273.21
SAMN12674489 Cucumis sativus Chunxiaqiuwang Leaves of plants treated with 200 mM NaCl for 7 days 152.82
SAMN12674492 Cucumis sativus Chunxiaqiuwang Leaves of plants treated with 200 mM NaCl + 15.0 uM NaHS for 7 days 339.56
PRJNA678740: Transcriptome responses to long-term waterlogging (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN16811424 Cucumis sativus DH2 Roots of tolerant plants untreated, cultivated in optimal conditions 80.84
SAMN16811567 Cucumis sativus DH2 Roots of tolerant plants after 7 days of waterlogging and 14 days of recovery period 34.63
SAMN16811530 Cucumis sativus DH2 Roots of non-primed tolerant plants, waterlogged for 7 days only once 80.53
SAMN16811572 Cucumis sativus DH2 Roots of primed tolerant plants; waterlogged twice after 14 days of recovery period 148.29
SAMN16811671 Cucumis sativus DH4 Roots of sensitive plants untreated, cultivated in optimal conditions 115.51
SAMN16811697 Cucumis sativus DH4 Roots of sensitive plants after 7 days of waterlogging and 14 days of recovery period 84.77
SAMN16811676 Cucumis sativus DH4 Roots of non-primed sensitive plants; waterlogged for 7 days only once 124.64
SAMN16811714 Cucumis sativus DH4 Roots of primed sensitive plants; waterlogged twice after 14 days of recovery period 92.92
PRJNA799460: Transcriptome responses of hypocotyl to different waterlogging stress treatments (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN25172608 Cucumis sativus Zaoer-N Hypocotyl of cucumber under control conditions for 48 hours 410.21
SAMN25172611 Cucumis sativus Zaoer-N Hypocotyl of cucumber under waterlogging for 48 hours 178.96
SAMN25172614 Cucumis sativus Zaoer-N Hypocotyl of cucumber treated with 10uM ACC waterlogging for 48 hours 161.06
SAMN25172617 Cucumis sativus Zaoer-N Hypocotyl of cucumber treated with 10uM AOA waterlogging for 48 hours 233.1
PRJNA844418: Transcriptome responses of different tissues of hypocotyl to waterlogging (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN28817254 Cucumis sativus Zaoer-N Hypocotyl epidermis of cucumber under control conditions for 48 hours 165.9
SAMN28817245 Cucumis sativus Zaoer-N Hypocotyl epidermis of cucumber under waterlogging stress for 48 hours 146.5
SAMN28817257 Cucumis sativus Zaoer-N Hypocotyl vascular bundles of cucumber under control conditions for 48 hours 124.4
SAMN28817248 Cucumis sativus Zaoer-N Hypocotyl vascular bundle of cucumber under waterlogging stress for 48 hours 185.14
SAMN28817260 Cucumis sativus Zaoer-N Hypocotyl basal tissue of cucumber under control conditions for 48 hours 183.02
SAMN28817251 Cucumis sativus Zaoer-N Hypocotyl basic tissue of cucumber under waterlogging stress for 48 hours 156.55
PRJNA563186: Transcriptome responses to Alternaria cucumerina (alternaria leaf spot) (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN12670099 Cucumis sativus Beijing204 Leaf of susceptible line at 2 days post mock treatment 176.07
SAMN12670096 Cucumis sativus Beijing204 Leaf of susceptible line at 2 days post inoculation with Alternaria cucumerina 269.04
SAMN12670105 Cucumis sativus Beijing204 Leaf of susceptible line at 6 days post mock treatment 226.2
SAMN12670102 Cucumis sativus Beijing204 Leaf of susceptible line at 6 days post inoculation with Alternaria cucumerina 280.67
SAMN12670111 Cucumis sativus D1322 Leaf of resistant line at 2 days post mock treatment 126.11
SAMN12670108 Cucumis sativus D1322 Leaf of resistant line at 2 days post inoculation with Alternaria cucumerina 285.59
SAMN12670117 Cucumis sativus D1322 Leaf of resistant line at 6 days post mock treatment 105.69
SAMN12670114 Cucumis sativus D1322 Leaf of resistant line at 6 days post inoculation with Alternaria cucumerina 179.48
PRJNA388584: Transcriptome responses to downy mildew (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN07179433 Cucumis sativus PI 197088 Leaf of resistant line at 0 h post inoculation with Pseudoperonospora cubensis 119.29
SAMN07179434 Cucumis sativus PI 197088 Leaf of resistant line at 6 h post inoculation with Pseudoperonospora cubensis 173.98
SAMN07179435 Cucumis sativus PI 197088 Leaf of resistant line at 24 h post inoculation with Pseudoperonospora cubensis 289.12
PRJNA544259: Transcriptome responses to downy mildew (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN11831000 Cucumis sativus HS279 Leaves of plants at three days post mock treatment 172.54
SAMN11831003 Cucumis sativus HS279 Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) 226.59
SAMN11831006 Cucumis sativus NIL DM4.1.2 Leaves of plants at three days post mock treatment 140.36
SAMN11831009 Cucumis sativus NIL DM4.1.2 Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) 184.3
SAMN11831012 Cucumis sativus NIL DM4.1.3 Leaves of plants at three days post mock treatment 172.32
SAMN11831015 Cucumis sativus NIL DM4.1.3 Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) 223.26
PRJNA776553: Garlic volatile diallyl disulfide (DADS) induced cucumber resistance to downy mildew (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN22799462 Cucumis sativus CCMC Leaf of plant uninoculated with P. cubensis and not treated with DADS 302.43
SAMN22799464 Cucumis sativus CCMC Leaf of plant uninoculated with P. cubensis and treated with DADS 345.06
SAMN22799450 Cucumis sativus CCMC Leaf of plant at 4 h post inoculation of P. cubensis and not treated with DADS 229.61
SAMN22799452 Cucumis sativus CCMC Leaf of plant at 4 h post inoculation of P. cubensis and treated with DADS 191.9
SAMN22799454 Cucumis sativus CCMC Leaf of plant at 24 h post inoculation of P. cubensis and not treated with DADS 277.61
SAMN22799456 Cucumis sativus CCMC Leaf of plant at 24 h post inoculation of P. cubensis and treated with DADS 250.99
SAMN22799458 Cucumis sativus CCMC Leaf of plant at 48 h post inoculation of P. cubensis and not treated with DADS 103.31
SAMN22799460 Cucumis sativus CCMC Leaf of plant at 48 h post inoculation of P. cubensis and treated with DADS 93.97
PRJNA472169: Transcriptome responses to Fusarium oxysporum (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN09228081 Cucumis sativus Rijiecheng Roots of plants at 0 h post inoculation with Foc 76.11
SAMN09228082 Cucumis sativus Rijiecheng Roots of plants at 24 h post inoculation with Foc 178.13
SAMN09228083 Cucumis sativus Rijiecheng Roots of plants at 48 h post inoculation with Foc 196.87
SAMN09228084 Cucumis sativus Rijiecheng Roots of plants at 96 h post inoculation with Foc 131.73
SAMN09228085 Cucumis sativus Rijiecheng Roots of plants at 192 h post inoculation with Foc 125.65
PRJNA484083: Transcriptome profiling of cucumber Fusarium wilt resistance induced by intercropping with celery (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN09759444 Cucumis sativus Fuyang Roots of monocultured resistant plants inoculated with Fusarium oxysporum 127.94
SAMN09759446 Cucumis sativus Fuyang Roots of resistant plants intercropped with celery and inoculated with Fusarium oxysporum 150.34
SAMN09759443 Cucumis sativus Tangyan Roots of monocultured susceptible plants inoculated with Fusarium oxysporum 135.3
SAMN09759445 Cucumis sativus Tangyan Roots of susceptible plants intercropped with celery and inoculated with Fusarium oxysporum 115.02
PRJNA750577: Transcriptome responses of CsRbohB-RNAi lines to Fusarium oxysporum (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN20474027 Cucumis sativus CCMC Roots of control plants at 48 hours 14.68
SAMN20474030 Cucumis sativus CCMC Roots of plants at 48 hours post inoculation with Foc 29.1
SAMN20474033 Cucumis sativus CsRbohB-RNAi Roots of control RNAi plants at 48 hours 23.06
SAMN20474036 Cucumis sativus CsRbohB-RNAi Roots of RNAi plants at 48 hours post inoculation with Foc 25.43
PRJNA419665: Transcriptome responses to nematode infection (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08095139 Cucumis sativus CC3 Roots of susceptible lines at 0 day post inoculation with Meloidogyne incognita 25.39
SAMN08095141 Cucumis sativus CC3 Roots of susceptible lines at 1 day post inoculation with Meloidogyne incognita 313.37
SAMN08095143 Cucumis sativus CC3 Roots of susceptible lines at 2 days post inoculation with Meloidogyne incognita 260.87
SAMN08095152 Cucumis sativus CC3 Roots of susceptible lines at 3 days post inoculation with Meloidogyne incognita 171.94
SAMN08095163 Cucumis sativus IL10-1 Roots of resistant lines at 0 day post inoculation with Meloidogyne incognita 61.34
SAMN08095169 Cucumis sativus IL10-1 Roots of resistant lines at 1 day post inoculation with Meloidogyne incognita 131.43
SAMN08095179 Cucumis sativus IL10-1 Roots of resistant lines at 2 days post inoculation with Meloidogyne incognita 174.11
SAMN08095185 Cucumis sativus IL10-1 Roots of resistant lines at 3 days post inoculation with Meloidogyne incognita 151.08
PRJNA445328: Transcriptome responses to biocontrol agent Trichoderma longibrachiatum (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08779020 Cucumis sativus Chinese Long Leaves from non-inoculated (with Trichoderma) and non-challenged (with B. cinerea) plants 166.77
SAMN08779324 Cucumis sativus Chinese Long Leaves from inoculated (with Trichoderma) and non-challenged (with B. cinerea) plants 418.99
SAMN08394921 Cucumis sativus Chinese Long Leaves from inoculated (with Trichoderma) and challenged (with B. cinerea) plants 618.99
PRJNA285071: Transcriptome responses to Pseudoperonospora cubensis (downy mildew) (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN03737503 Cucumis sativus Vlaspik Leaf of susceptible line under mock treatment 143.48
SAMN03734820 Cucumis sativus Vlaspik Leaf of susceptible line at 1 day post inoculation with Pseudoperonospora cubensis 148.93
SAMN03737532 Cucumis sativus Vlaspik Leaf of susceptible line at 2 days post inoculation with Pseudoperonospora cubensis 71.42
SAMN03737500 Cucumis sativus Vlaspik Leaf of susceptible line at 3 days post inoculation with Pseudoperonospora cubensis 80.78
SAMN03737501 Cucumis sativus Vlaspik Leaf of susceptible line at 4 days post inoculation with Pseudoperonospora cubensis 76.33
SAMN03737502 Cucumis sativus Vlaspik Leaf of susceptible line at 6 days post inoculation with Pseudoperonospora cubensis 87.51
SAMN03737504 Cucumis sativus PI 197088 Leaf of resistant line under mock treatment 118.08
SAMN03737508 Cucumis sativus PI 197088 Leaf of resistant line at 1 day post inoculation with Pseudoperonospora cubensis 82.53
SAMN03737509 Cucumis sativus PI 197088 Leaf of resistant line at 2 days post inoculation with Pseudoperonospora cubensis 44.74
SAMN03737510 Cucumis sativus PI 197088 Leaf of resistant line at 3 days post inoculation with Pseudoperonospora cubensis 80.22
SAMN03737511 Cucumis sativus PI 197088 Leaf of resistant line at 4 days post inoculation with Pseudoperonospora cubensis 62.31
SAMN03737512 Cucumis sativus PI 197088 Leaf of resistant line at 6 days post inoculation with Pseudoperonospora cubensis 57.29
PRJNA292785: Transcriptome response by physcion and chrysophanol against cucumber powdery mildew (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN03988531 Cucumis sativus Changchunmici Leaves of plants mock treated before inoculation with Sphaerotheca fuliginea for 3 days 300.85
SAMN03988533 Cucumis sativus Changchunmici Leaves of plants treated with chrysophano before inoculation with Sphaerotheca fuliginea for 3 days 321.81
SAMN03988535 Cucumis sativus Changchunmici Leaves of plants treated with physcion before inoculation with Sphaerotheca fuliginea for 3 days 295.09
SAMN03988538 Cucumis sativus Changchunmici Leaves of plants treated with physcion and chrysophano before inoculation with Sphaerotheca fuliginea for 3 days 223.67
PRJNA321023: Transcriptome responses to powdery mildew disease (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04962346 Cucumis sativus D8 Leaves of susceptible plants at 0 h post inoculation with powdery mildew fungus 168.37
SAMN04962349 Cucumis sativus D8 Leaves of susceptible plants at 48 h post inoculation with powdery mildew fungus 98.08
SAMN04962345 Cucumis sativus SSL508-28 Leaves of resistant plants at 0 h post inoculation with powdery mildew fungus 124.37
SAMN04962354 Cucumis sativus SSL508-28 Leaves of resistant plants at 48 h post inoculation with powdery mildew fungus 28.62
PRJNA603869: Transcriptome responses to powdery mildew disease (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN13943385 Cucumis sativus Q10 Leaf of susceptible line at 24 h post mock treatment 236.86
SAMN13943392 Cucumis sativus Q10 Leaf of susceptible line at 24 h post inoculation with powdery mildew fungus 208.82
SAMN13943388 Cucumis sativus Q10 Leaf of susceptible line at 48 h post mock treatment 194.28
SAMN13943395 Cucumis sativus Q10 Leaf of susceptible line at 48 h post inoculation with powdery mildew fungus 183.4
SAMN13943398 Cucumis sativus XY09-118 Leaf of resistant line at 24 h post mock treatment 320.52
SAMN13943405 Cucumis sativus XY09-118 Leaf of resistant line at 24 h post inoculation with powdery mildew fungus 374.98
SAMN13943402 Cucumis sativus XY09-118 Leaf of resistant line at 48 h post mock treatment 257.27
SAMN13943408 Cucumis sativus XY09-118 Leaf of resistant line at 48 h post inoculation with powdery mildew fungus 614.86
PRJNA816625: Transcriptome response to Podosphaera xanthii (powdery mildew) (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN26686559 Cucumis sativus B21-a-2-2-2 Cotyledon of susceptible line at 0 h post inoculation with Podosphaera xanthii 165.88
SAMN26686562 Cucumis sativus B21-a-2-1-2 Cotyledon of resistant line at 0 h post inoculation with Podosphaera xanthii 229.56
SAMN26686565 Cucumis sativus B21-a-2-2-2 Cotyledon of susceptible line at 6 h post inoculation with Podosphaera xanthii 102.67
SAMN26686568 Cucumis sativus B21-a-2-1-2 Cotyledon of resistant line at 6 h post inoculation with Podosphaera xanthii 177.91
PRJNA704621: Transcriptome responses to Pseudomonas syringae pv. lachrymans (Psl) (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN18049944 Cucumis sativus B10 Leaf of susceptible line without Psl 814/98 inoculation 194.11
SAMN18050103 Cucumis sativus B10 Leaf of susceptible line at 1 day post inoculation with Psl 814/98 282.22
SAMN18050492 Cucumis sativus B10 Leaf of susceptible line at 3 days post inoculation with Psl 814/98 291.07
SAMN18050892 Cucumis sativus Gy14 Leaf of resistant line without Psl 814/98 inoculation 177.32
SAMN18051058 Cucumis sativus Gy14 Leaf of resistant line at 1 day post inoculation with Psl 814/98 298.3
SAMN18051198 Cucumis sativus Gy14 Leaf of resistant line at 3 days post inoculation with Psl 814/98 279.72
PRJNA345040: Transcriptomes of peels from fruit differing in age-related resistance to Phytophthora capsici (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN05856085 Cucumis sativus Vlaspik Fruit peel collected at 8 days post pollination (susceptible age) 72.51
SAMN05856088 Cucumis sativus Vlaspik Fruit peel collected at 16 days post pollination (resistant age) 186.03
SAMN05856091 Cucumis sativus Gy14 Fruit peel collected at 8 days post pollination (susceptible age) 64.93
SAMN05856094 Cucumis sativus Gy14 Fruit peel collected at 16 days post pollination (susceptible age) 142.87
PRJNA575868: Transcriptomes of fruit peel in response to Phytophthora capsici (fruit rot) (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN12912830 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 0 h (Experiment 1) 275.25
SAMN12912831 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 1) 435.24
SAMN12912832 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 1) 161.31
SAMN12912833 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 48 h (Experiment 1) 362.72
SAMN12912838 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 0 h (Experiment 2) 96.72
SAMN12912839 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 2 h (Experiment 2) 104.02
SAMN12912852 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 2 h (Experiment 2) 136.86
SAMN12912840 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 4 h (Experiment 2) 109.46
SAMN12912853 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 2) 89.96
SAMN12912841 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 8 h (Experiment 2) 200.39
SAMN12912854 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 8 h (Experiment 2) 134.5
SAMN12912842 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 12 h (Experiment 2) 204.32
SAMN12912855 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 12 h (Experiment 2) 104.45
SAMN12912843 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 18 h (Experiment 2) 310.98
SAMN12912856 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 18 h (Experiment 2) 95.21
SAMN12912844 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then under mock treatment for 24 h (Experiment 2) 268.93
SAMN12912857 Cucumis sativus Poinsett 76 Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 2) 124.89
SAMN12912834 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 0 h (Experiment 1) 278.23
SAMN12912835 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 1) 488.18
SAMN12912836 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 1) 655.59
SAMN12912837 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 48 h (Experiment 1) 864.6
SAMN12912845 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 0 h (Experiment 2) 117.49
SAMN12912846 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 2 h (Experiment 2) 186.86
SAMN12912858 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 2 h (Experiment 2) 155.99
SAMN12912847 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 4 h (Experiment 2) 174.31
SAMN12912859 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 2) 146.25
SAMN12912848 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 8 h (Experiment 2) 246.51
SAMN12912860 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 8 h (Experiment 2) 147.25
SAMN12912849 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 12 h (Experiment 2) 274.02
SAMN12912861 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 12 h (Experiment 2) 102.19
SAMN12912850 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 18 h (Experiment 2) 261.64
SAMN12912862 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 18 h (Experiment 2) 134.82
SAMN12912851 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then under mock treatment for 24 h (Experiment 2) 321.83
SAMN12912863 Cucumis sativus Poinsett 76 Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 2) 160.04
PRJNA646644: Transcriptome responses to cucumber green mottle mosaic virus (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN15548822 Cucumis sativus 229 Leaf of healthy control, 3 days 209.92
SAMN15548823 Cucumis sativus 229 Leaf of plant at 3 days post inoculation with cucumber green mottle mosaic virus 198.39
SAMN15548824 Cucumis sativus 229 Leaf of healthy control, 20 days 283.48
SAMN15548825 Cucumis sativus 229 Leaf of plant at 20 days post inoculation with cucumber green mottle mosaic virus 256.17
PRJNA701150: Transcriptome responses to cucumber green mottle mosaic virus (CGMMV) (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN17849263 Cucumis sativus KS Leaves of healthy plants 30.62
SAMN17849283 Cucumis sativus KS Bright yellow islands from CGMMV-infected leaves exhibiting early post-recovery stage symptoms 63.53
SAMN17849285 Cucumis sativus KS Dark green islands from CGMMV-infected leaves exhibiting early post-recovery stage symptoms 48.52
SAMN17849284 Cucumis sativus KS Bright yellow islands from CGMMV-infected leaves exhibiting late post-recovery stage symptoms 29.77
SAMN17849286 Cucumis sativus KS Dark green islands from CGMMV-infected leaves exhibiting late post-recovery stage symptoms 37.84
PRJNA837466: Transcriptome response to Prunus necrotic ringspot virus (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN28204068 Cucumis sativus NA Leaf of cucumber seedlings at 12 days of mock treatment 61.65
SAMN28204071 Cucumis sativus NA Leaf of cucumber seedlings at 12 days post-inoculation with Prunus necrotic ringspot virus 98.22
PRJNA307098: Transcriptome profiling of corolla opening (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04372266 Cucumis sativus 6457 Corolla opening in the normal ovary at 1 day after labeling 58.81
SAMN04372269 Cucumis sativus 6457 Corolla opening in the normal ovary at 3 days after labeling 66.21
SAMN04372272 Cucumis sativus 6457 Corolla opening in the normal ovary at 4 days after labeling 40.33
SAMN04372275 Cucumis sativus 6457 Corolla opening in the normal ovary at 5 days after labeling 160.96
SAMN04372278 Cucumis sativus 6457 Corolla opening in the super ovary at 1 day after labeling 31.77
SAMN04372281 Cucumis sativus 6457 Corolla opening in the super ovary at 3 days after labeling 34.57
SAMN04372284 Cucumis sativus 6457 Corolla opening in the super ovary at 4 days after labeling 37.81
SAMN04372287 Cucumis sativus 6457 Corolla opening in the super ovary at 5 days after labeling 54.45
SAMN04372291 Cucumis sativus 6457 Corolla opening in the super ovary at 7 days after labeling 91.6
SAMN04372294 Cucumis sativus 6457 Corolla opening in the super ovary at 8 days after labeling 119.07
SAMN04372289 Cucumis sativus 6457 Corolla opening in the super ovary at 9 days after labeling 187.62
PRJNA783663: Time-course transcriptome of multicellular trichomes (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN23441956 Cucumis sativus 3542 Cotyledon at 18 hours after seed soaking 77.09
SAMN23441959 Cucumis sativus 3542 Cotyledon at 36 hours after seed soaking 333.11
SAMN23441962 Cucumis sativus 3542 Cotyledon at 60 hours after seed soaking 345.09
SAMN23441965 Cucumis sativus 3542 Cotyledon at 72 hours after seed soaking 144.44
SAMN23441968 Cucumis sativus 3542 Cotyledon at 96 hours after seed soaking 93.83
PRJNA258122: Transcriptomes of early fruits (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN02988317 Cucumis sativus 408 Early fruits of about 2-4cm 102.61
SAMN02988319 Cucumis sativus 409 Early fruits of about 2-4cm 323.53
PRJNA381300: Transcriptome profiling of fruits and leaves (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN06673860 Cucumis sativus Chinese Long Leaf 41.06
SAMN06673861 Cucumis sativus Chinese Long Fruit flesh at 10 days post anthesis 51.8
SAMN06673862 Cucumis sativus Chinese Long Fruit flesh at 20 days post anthesis 162.33
SAMN06673863 Cucumis sativus Chinese Long Fruit flesh at 30 days post anthesis 436.6
SAMN06673864 Cucumis sativus Chinese Long Fruit flesh at 40 days post anthesis 432.13
SAMN06673866 Cucumis sativus Chinese Long Fruit flesh at 40 days post anthesis, treated with ethylene for 1.5 h 871.46
PRJNA448682: Transcriptome profiling of fruit development (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08862945 Cucumis sativus YanBai Flesh at 3 days after self-pollination 203.98
SAMN08862951 Cucumis sativus YanBai Flesh at 6 days after self-pollination 234.34
SAMN08862949 Cucumis sativus YanBai Flesh at 9 days after self-pollination 374.24
SAMN08862946 Cucumis sativus YanBai Peel at 3 days after self-pollination 142.1
SAMN08862944 Cucumis sativus YanBai Peel at 6 days after self-pollination 174.98
SAMN08862950 Cucumis sativus YanBai Peel at 9 days after self-pollination 329.86
PRJNA517913: Transcriptomes of fruits in lines with different carpel numbers (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN10847189 Cucumis sativus 32X Fruits at anthesis (carpel number=3) 97.72
SAMN10847186 Cucumis sativus GFC Fruits at anthesis (carpel number=5) 24.5
PRJNA558838: Transcriptome profiling of fruit development (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN12500541 Cucumis sativus Gy14 Fruit peel at 8 days post pollination 293.23
SAMN12500542 Cucumis sativus Gy14 Fruit peel at 16 days post pollination 409.13
SAMN12500543 Cucumis sativus Poinsett 76 Fruit peel at 8 days post pollination 275.25
SAMN12500544 Cucumis sativus Poinsett 76 Fruit peel at 16 days post pollination 278.23
PRJNA564950: Transcriptome profiling of mesocarp development (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN12727350 Cucumis sativus D8 Mesocarps at 0 day after pollination 94.63
SAMN12727353 Cucumis sativus D8 Mesocarps at 3 days after pollination 161.13
SAMN12727356 Cucumis sativus D8 Mesocarps at 6 days after pollination 214.74
SAMN12727359 Cucumis sativus D8 Mesocarps at 9 days after pollination 504.12
PRJNA647135: Transcriptomes of fruit skin with different colors (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN15577520 Cucumis sativus Bai Fruit skin at 15 days after flowering 290.92
SAMN15577524 Cucumis sativus Lv Fruit skin at 15 days after flowering 879.01
PRJNA678478: Transcriptome profiling of fruit peels with different colors (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN16803070 Cucumis sativus L14 Yellow mature peel 544.95
SAMN16803071 Cucumis sativus L14 Green-white young peel 235.29
SAMN16803072 Cucumis sativus L19 White mature peel 382.65
SAMN16803073 Cucumis sativus L19 Green-white young peel 307.62
PRJNA707246: Transcriptome profiling of yellow and white fruit flesh (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN18192479 Cucumis sativus NA Yellow fruit flesh at 10 days after pollination 745.12
SAMN18192488 Cucumis sativus NA White fruit flesh at 10 days after pollination 883.08
SAMN18192482 Cucumis sativus NA Yellow fruit flesh at 20 days after pollination 1020.47
SAMN18192491 Cucumis sativus NA White fruit flesh at 20 days after pollination 1141.86
SAMN18192485 Cucumis sativus NA Yellow fruit flesh at 30 days after pollination 789.21
SAMN18192494 Cucumis sativus NA White fruit flesh at 30 days after pollination 585.98
PRJNA817515: Transcriptomes of fruit flesh and peel (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN26791361 Cucumis sativus Chuichung Peel of ripe fruit 1214.93
SAMN26791363 Cucumis sativus White Dadagi Peel of ripe fruit 296.48
SAMN26791365 Cucumis sativus Mini Peel of ripe fruit 602.52
SAMN26791362 Cucumis sativus Chuichung Flesh of ripe fruit 824.68
SAMN26791364 Cucumis sativus White Dadagi Flesh of ripe fruit 734.01
SAMN26791366 Cucumis sativus Mini Flesh of ripe fruit 2458.04
PRJNA660492: Transcriptome profiling of fruit spine development (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN15951074 Cucumis sativus NC072 Fruit spines at stage II (0.2 cm ovary) 86.3
SAMN15951077 Cucumis sativus NC072 Fruit spines at stage III (0.35 cm ovary) 107.6
SAMN15951080 Cucumis sativus NC072 Fruit spines at stage IV (0.65 cm ovary) 147.47
SAMN15951083 Cucumis sativus NC073 Fruit spines at stage II (0.2 cm ovary) 145.34
SAMN15951086 Cucumis sativus NC073 Fruit spines at stage III (0.35 cm ovary) 175.91
SAMN15951089 Cucumis sativus NC073 Fruit spines at stage IV (0.65 cm ovary) 178.34
PRJNA852610: Transcriptome profiling of fruit spine (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN29336066 Cucumis sativus WZ1 Fruit spine at 8 days before anthesis 188.58
SAMN29336069 Cucumis sativus WZ1 Fruit spine at anthesis 261.75
SAMN29336072 Cucumis sativus WZ1 Fruit spine at 8 days after anthesis 325.6
PRJNA552914: Trancriptome profiling of homo- and hetero-grafted plants (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN12221401 Cucumis sativus Xintaimici Leaf of homografting plants (cucumber grafted on cucumber) 192.98
SAMN12221407 Cucumis sativus Xintaimici Leaf of heterografting plants (cucumber grafted on C. moschata) 423.54
SAMN12221404 Cucumis sativus Xintaimici Root of homografting plants (cucumber grafted on cucumber) 46.85
SAMN12221416 Cucumis sativus Xintaimici Root of heterografting plants (C. moschata grafted on cucumber) 48.76
PRJNA317163: Grafting changed silicon metabolism and expression of bloom-forming related genes (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04600319 Cucumis sativus Shannong No.5 Pericarp of non-grafted cucumber (with sparse bloom) 446.37
SAMN04600321 Cucumis sativus Shannong No.5 Pericarp of non-grafted cucumber treated with 1.7mM silicon for 2 hours (with dense bloom) 73.72
SAMN04600323 Cucumis sativus Shannong No.5 Pericarp of self-grafted cucumber (with sparse bloom) 37.92
SAMN04600325 Cucumis sativus Shannong No.5 Pericarp of self-grafted cucumber treated with 1.7mM silicon for 2 hours (with dense bloom) 61.79
SAMN04600327 Cucumis sativus Shannong No.5 Pericarp of cucumber grafted onto pumpkin '3212' (with sparse bloom) 25.19
SAMN04600330 Cucumis sativus Shannong No.5 Pericarp of cucumber grafted onto pumpkin '3212' and treated with 1.7mM silicon for 2 hours (with least bloom) 44.43
SAMN04600332 Cucumis sativus Shannong No.5 Pericarp of cucumber grafted onto pumpkin '3225' (with sparse bloom) 68.18
SAMN04600334 Cucumis sativus Shannong No.5 Pericarp of cucumber grafted onto pumpkin '3225' and treated with 1.7mM silicon for 2 hours (with dense bloom) 44.53
PRJNA612596: Transcriptomes of virescent leaf and green leaf (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN14377560 Cucumis sativus 104Y The first true leaf of virescent leaf mutant 87.26
SAMN14377563 Cucumis sativus EC1 The first true leaf of wild type plant (green leaf) 65.03
PRJNA312872: Transcriptome atlas of cucumber (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04530052 Cucumis sativus 9930 Flesh of unfertilized ovary 418.64
SAMN04530054 Cucumis sativus 9930 Flesh of 1-week-old fruit 230.58
SAMN04530056 Cucumis sativus 9930 Flesh of 2-week-old fruit 351.53
SAMN04530058 Cucumis sativus 9930 Flesh of 3-week-old fruit 530.62
SAMN04530051 Cucumis sativus 9930 Peel of unfertilized ovary 363
SAMN04530053 Cucumis sativus 9930 Peel of 1-week-old fruit 135.95
SAMN04530055 Cucumis sativus 9930 Peel of 2-week-old fruit 532.2
SAMN04530057 Cucumis sativus 9930 Peel of 3-week-old fruit 585.97
SAMN04530050 Cucumis sativus 9930 Unfertilized ovary (not grew) 261.97
SAMN04530047 Cucumis sativus 9930 Female flower 375.5
SAMN04530049 Cucumis sativus 9930 Male flower 463.67
SAMN04530048 Cucumis sativus 9930 Male flower bud 47.59
SAMN04530038 Cucumis sativus 9930 Cotyledon of 4-week-old seedlings 482.5
SAMN04530037 Cucumis sativus 9930 Hypocotyl of 4-week-old seedlings 499.52
SAMN04530036 Cucumis sativus 9930 Root of 4-week-old seedlings 154.76
SAMN04530039 Cucumis sativus 9930 True Leaf of 4-week-old seedlings 173.31
SAMN04530042 Cucumis sativus 9930 Young Leaf 30.03
SAMN04530044 Cucumis sativus 9930 Old leaf 207.6
SAMN04530043 Cucumis sativus 9930 Petiole of young leaf 117.32
SAMN04530045 Cucumis sativus 9930 Petiole of old leaf 578.59
SAMN04530040 Cucumis sativus 9930 Root 178.62
SAMN04530041 Cucumis sativus 9930 Stem 360.63
SAMN04530046 Cucumis sativus 9930 Tendril 438.02
PRJNA752681: Transcriptomes of a dark green genotype (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN20604789 Cucumis sativus DG Leaf blade 79.58
SAMN20604791 Cucumis sativus DG Petiole 435.89
SAMN20604790 Cucumis sativus DG Stem 459.75
PRJNA80169: Transcriptomes of different cucumber tissues (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN00738224 Cucumis sativus Chinese Long Ovary 18.87
SAMN00738223 Cucumis sativus Chinese Long Expanded ovary under fertilization (7 days after flowering) 13.62
SAMN00738222 Cucumis sativus Chinese Long Expanded ovary not fertilized (7 days after flowering) 135.66
SAMN00738220 Cucumis sativus Chinese Long Female flower 42.79
SAMN00738221 Cucumis sativus Chinese Long Male flower 33.21
SAMN00738225 Cucumis sativus Chinese Long Root 5.61
SAMN00738219 Cucumis sativus Chinese Long Stem 55.54
SAMN00738218 Cucumis sativus Chinese Long Leaf 54.23
SAMN00738226 Cucumis sativus Chinese Long Tendril 148.91
SAMN00738227 Cucumis sativus Chinese Long Base part of tendril 145.42
PRJNA773731: Transcriptomes of apical pistils in wild-type and mutants (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN22504570 Cucumis sativus Xintaimici Apical pistils containing stigmas and styles at anthesis 198.13
SAMN22504567 Cucumis sativus Csalc-/- Apical pistils containing stigmas and styles at anthesis 202.66
SAMN22504573 Cucumis sativus Csspt-/- Apical pistils containing stigmas and styles at anthesis 255.25
SAMN22504565 Cucumis sativus CssptCsalc-/- Apical pistils containing stigmas and styles at anthesis 230.28
PRJNA510369: Transcriptome of lateral bud of CsBRC1 RNAi line (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN10602942 Cucumis sativus CsBRC1-RNAi Lateral bud 66.91
SAMN10602932 Cucumis sativus R1461 Lateral bud 106.48
PRJNA700062: Transcriptomes of Cshec2 CRISPR mutant (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN17821603 Cucumis sativus Cshec2 CRISPR mutant Female bud at 7 days before anthesis 16.57
SAMN17821606 Cucumis sativus XTMC Female bud at 7 days before anthesis 132.94
PRJNA685868: Transcriptomes of albino mutant (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN17098952 Cucumis sativus albino mutant Cotyledon of 7-day-old seedling 71.6
SAMN17098955 Cucumis sativus g32 Cotyledon of 7-day-old seedling 112.98
PRJNA402017: Transcriptome of young fruits of CsFUL1 overexpression line (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN07614792 Cucumis sativus R1407 Young fruits at 4 days before anthesis (long fruit) 403.93
SAMN07614794 Cucumis sativus CsFUL1 overexpression line Young fruits at 4 days before anthesis (short fruit) 322.13
PRJNA540430: Transcriptome of fruit of sf2 mutant (short-fruit) (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN11536744 Cucumis sativus 406 Fruit at 0 days after anthesis 75.07
SAMN11536742 Cucumis sativus sf2 mutant Fruit at 0 days after anthesis 95.43
PRJNA541993: Transcriptome of fruit peel of an irregularly striped rind mutant (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN11606053 Cucumis sativus CCMC Fruit peel at 10 days after post pollination 532.31
SAMN11606056 Cucumis sativus ist mutant Fruit peel at 10 days after post pollination 523.41
PRJNA685586: Leaf transcriptomes of multiple trichome (mt) mutant (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN17088088 Cucumis sativus CCMC The first true leaf 51.54
SAMN17088091 Cucumis sativus mt mutant The first true leaf 57.63
PRJNA342056: Transcriptomes of CsIND-RNAi lines (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN05735036 Cucumis sativus CsIND-RNAi Leaf vein 70.76
SAMN05735041 Cucumis sativus R1461 Leaf vein 86.1
SAMN05735039 Cucumis sativus CsIND-RNAi Young fruit at 4 d before anthesis 25.96
SAMN05735037 Cucumis sativus R1461 Young fruit at 4 d before anthesis 34.81
PRJNA672817: Transcriptome profiling of micro-plant (mp) mutant (strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN16578602 Cucumis sativus CCMC Leaf 137.08
SAMN16578605 Cucumis sativus CCMC Stem 250.32
SAMN16578608 Cucumis sativus CCMC Root 79.34
SAMN16578611 Cucumis sativus mp Leaf 285.15
SAMN16578614 Cucumis sativus mp Stem 342.48
SAMN16578617 Cucumis sativus mp Root 63.38
PRJNA428976: Transcriptomes of young ovaries in the round leaf mutant (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08326585 Cucumis sativus Round leaf (rl) mutant Young ovaries at 4 d before anthesis 346.25
SAMN08326588 Cucumis sativus 649 Young ovaries at 4 d before anthesis 453.27
PRJNA382994: Transcriptome profiling of mosaic (MSC) mitochondrial mutants (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN06768506 Cucumis sativus B Shoots (cut off 0.5 cm below the cotyledons) 115.8
SAMN06768508 Cucumis sativus MSC3 Shoots (cut off 0.5 cm below the cotyledons) 131.59
SAMN06768510 Cucumis sativus MSC12 Shoots (cut off 0.5 cm below the cotyledons) 168.33
SAMN06768512 Cucumis sativus MSC16 Shoots (cut off 0.5 cm below the cotyledons) 147.92
PRJNA765045: Transcriptome profiling of reciprocal hybrids (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN21542188 Cucumis sativus ST8-4x9930-3 Apical meristem and young leaf from hybrids with significant reciprocal effects 73.01
SAMN21542191 Cucumis sativus 9930-3xST8-4 Apical meristem and young leaf from hybrids with significant reciprocal effects 77
SAMN21542194 Cucumis sativus ST8-2xGY14-15 Apical meristem and young leaf from hybrids with significant reciprocal effects 84.5
SAMN21542197 Cucumis sativus GY14-15xST8-2 Apical meristem and young leaf from hybrids with significant reciprocal effects 93.54
SAMN21542200 Cucumis sativus ST8-4xTMG1-5 Apical meristem and young leaf from hybrids with no significant reciprocal effects 111.6
SAMN21542203 Cucumis sativus TMG1-5xST8-4 Apical meristem and young leaf from hybrids with no significant reciprocal effects 128.63
SAMN21542206 Cucumis sativus ST8-4xGY14-15 Apical meristem and young leaf from hybrids with no significant reciprocal effects 165.15
SAMN21542209 Cucumis sativus GY14-15xST8-4 Apical meristem and young leaf from hybrids with no significant reciprocal effects 138.89
PRJNA428292: Transcriptomes of cucumber ovaries inhibited by dominant fruits (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08286996 Cucumis sativus var. sativus Elem female Ovary at 1 day after pollination in presence of older fruits (f+1) 36.16
SAMN08286998 Cucumis sativus var. sativus Elem female Ovary at 1 DPA, no pollination (S+1) 79.19
SAMN08287001 Cucumis sativus var. sativus Elem female Ovary at 1 day after pollination (F+1) 33.99
SAMN08287004 Cucumis sativus var. sativus Elem female Ovary at anthesis 32.19
PRJNA431715: Transcriptomes of ovaries and pericarps from numerous-spine and few-spine inbred lines (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN08398980 Cucumis sativus NCG122 Pericarp on the day of flowering of numerous fruit spine line 64.64
SAMN08398977 Cucumis sativus NCG122 Ovary at 6 days before flowering of numerous fruit spine line 76.85
SAMN08398986 Cucumis sativus NCG121 Pericarp on the day of flowering of few fruit spine line 59.03
SAMN08398983 Cucumis sativus NCG121 Ovary at 6 days before flowering of few fruit spine line 30.13
PRJNA613672: Transcriptome profiling of ovary culture-induced embryogenesis (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN14414632 Cucumis sativus SG033 Fresh unpollinated ovaries cultured for 0 d 113.37
SAMN14414629 Cucumis sativus SG033 Ovules cultured for 2 d 273.53
SAMN14414626 Cucumis sativus SG033 Embryos cultured for 10 d 387.25
SAMN14414623 Cucumis sativus SG033 Embryos cultured for 20 d 220.88
SAMN14414621 Cucumis sativus SG033 Embryos cultured for 30 d 240.53
SAMN14414646 Cucumis sativus SG033 Shoots after 60 d of culture 270.98
PRJDB6130: Hydrotropism-related gene expression in roots exposed to different gravitational conditions (strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMD00089537 Cucumis sativus var. sativus Shinkasyuu-jibai Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions without hydrostimulation 89.91
SAMD00089538 Cucumis sativus var. sativus Shinkasyuu-jibai Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions without hydrostimulation 86.51
SAMD00089539 Cucumis sativus var. sativus Shinkasyuu-jibai Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to hydrostimulation 80.54
SAMD00089540 Cucumis sativus var. sativus Shinkasyuu-jibai Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to hydrostimulation 74.1
SAMD00089541 Cucumis sativus var. sativus Shinkasyuu-jibai Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to H2O saturation 54.95
SAMD00089542 Cucumis sativus var. sativus Shinkasyuu-jibai Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to H2O saturation 49.57
SAMD00089543 Cucumis sativus var. sativus Shinkasyuu-jibai Wet side of longitudinally halved roots from germinated cucumber seedlings exposed to hydrostimulation under clinostat conditions for 4 h 91.19
SAMD00089544 Cucumis sativus var. sativus Shinkasyuu-jibai Dry side of longitudinally halved roots from germinated cucumber seedlings exposed to hydrostimulation under clinostat conditions for 4 h 81.11
SAMD00089545 Cucumis sativus var. sativus Shinkasyuu-jibai Wet side of longitudinally halved roots that bent to the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h 73.85
SAMD00089546 Cucumis sativus var. sativus Shinkasyuu-jibai Dry side of longitudinally halved roots that bent to the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h 64.48
SAMD00089547 Cucumis sativus var. sativus Shinkasyuu-jibai Wet side of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h 67.09
SAMD00089548 Cucumis sativus var. sativus Shinkasyuu-jibai Dry side of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h 74.36
PRJNA271595: Transcriptome profiling of root development (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN03275394 Cucumis sativus Gy14 Root elongation zone 6.31
SAMN03275412 Cucumis sativus Gy14 Root meristematic zone 2.04
SAMN03275424 Cucumis sativus Gy14 Root differentiation zone 10.1
PRJNA319011: Transcriptome profiles of seed from fruit at different developmental stages (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN04867895 Cucumis sativus Marketmore Seed at 28 days after pollination 0.48
SAMN04867896 Cucumis sativus Marketmore Seed at 37 days after pollination 2.06
SAMN04867897 Cucumis sativus Marketmore Seed at 45 days after pollination 2.72
SAMN04867898 Cucumis sativus Marketmore Seed at 60 days after pollination 45.31
PRJNA359788: Transcriptomes of cucumber lines with different sex types (non-strand-specific; Publication) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN06198176 Cucumis sativus B10 Shoot apex from monoecious B10 cucumber line - male 116.34
SAMN06198221 Cucumis sativus 859 Shoot apex from androecious 859 cucumber line - male 60.74
SAMN06198177 Cucumis sativus Gy3 Shoot apex from gynoecious Gy3 cucumber line - female 159.57
SAMN06198244 Cucumis sativus 2gg Shoot apex from gynoecious 2gg cucumber line - female 97.15
SAMN06198219 Cucumis sativus Hgy3 Shoot apex from hermaphrodite Hgy3 cucumber line - hermaphrodite 78.62
SAMN06198226 Cucumis sativus LH Shoot apex from andromonoecious LH cucumber line - hermaphrodite 93.74
PRJNA827999: Transcriptome profiling of shoot apex in determinate/indeterminate growth genotypes (non-strand-specific) Download Show/hide expression
Sample ID Species Genotype Description Expression (FPKM)
SAMN27628251 Cucumis sativus D82 Shoot apex of the first expanding leaf from the determinate growth genotype 18.86
SAMN27628254 Cucumis sativus CCMC Shoot apex of the first expanding leaf from the indeterminate growth genotype 5.8
SAMN27628252 Cucumis sativus D82 Shoot apex of the third expanding leaf from the determinate growth genotype 27.02
SAMN27628255 Cucumis sativus CCMC Shoot apex of the third expanding leaf from the indeterminate growth genotype 8.91
SAMN27628253 Cucumis sativus D82 Shoot apex of the sixth expanding leaf from the determinate growth genotype 43.09
SAMN27628256 Cucumis sativus CCMC Shoot apex of the sixth expanding leaf from the indeterminate growth genotype 14.8