| PRJNA376073: Transcriptome responses to GA3 (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SRX2577785 | Cucumis sativus | 13_3B | Shoot apices without GA3 treatment | 185.91 |
| SRX2577783 | Cucumis sativus | 13_3B | Shoot apices treated with GA3 for 6 h | 195.98 |
| SRX2577781 | Cucumis sativus | 13_3B | Shoot apices treated with GA3 for 12 h | 191.54 |
|
| PRJNA613788: Transcriptome response to sugar treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14419958 | Cucumis sativus | ZK | Non-pollinated fruit | 113.41 |
| SAMN14419952 | Cucumis sativus | ZK | Fruit at one day after anthesis treated with fructose | 105.19 |
| SAMN14419954 | Cucumis sativus | ZK | Fruit at one day after anthesis treated with glucose | 110.66 |
| SAMN14419956 | Cucumis sativus | ZK | Fruit at one day after anthesis treated with sucrose | 135.78 |
|
| PRJNA667293: Transcriptome profiling of lateral root development regulated by GA3 (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN16365205 | Cucumis sativus | Daqingba | Roots of seedlings with mock treatment at 2 days after germination | 95.41 |
| SAMN16365207 | Cucumis sativus | Daqingba | Roots of seedlings treated with 50 uM GA3 at 2 days after germination | 76.94 |
| SAMN16365210 | Cucumis sativus | Daqingba | Roots of seedlings with mock treatment at 3 days after germination | 97.93 |
| SAMN16365213 | Cucumis sativus | Daqingba | Roots of seedlings treated with 50 uM GA3 at 3 days after germination | 87.33 |
| SAMN16365216 | Cucumis sativus | Daqingba | Roots of seedlings with mock treatment at 5 days after germination | 106.63 |
| SAMN16365219 | Cucumis sativus | Daqingba | Roots of seedlings treated with 50 uM GA3 at 5 days after germination | 86.75 |
|
| PRJNA782544: Transcriptome responses to ethrel (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN23383751 | Cucumis sativus | Xinchun No. 4 | Explants treated with 0.5 uM ethrel for 48 hours | 336.07 |
| SAMN23383748 | Cucumis sativus | Xinchun No. 4 | Explants treated with distilled water for 48 hours | 370.41 |
|
| PRJNA316747: Transcriptomes of cucumber roots inoculated by AMF (Rhizophagus irregularis) under low temperature (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04589924 | Cucumis sativus | Zhongnong No. 26 | Root of non-inoculated plant under normal temperature | 38.98 |
| SAMN04589926 | Cucumis sativus | Zhongnong No. 26 | Root of plant inoculated with AMF R. irregularis under normal temperature | 48.78 |
| SAMN04589925 | Cucumis sativus | Zhongnong No. 26 | Root of non-inoculated plant under low temperature | 34.28 |
| SAMN04589927 | Cucumis sativus | Zhongnong No. 26 | Root of plant inoculated with AMF R. irregularis under low temperature | 38.29 |
|
| PRJNA438923: Transcriptome responses to chilling stress (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08731966 | Cucumis sativus | Cu-01 | Leaves of untreated plants | 595.26 |
| SAMN08731973 | Cucumis sativus | Cu-01 | Leaves of plants exposed to an air temperature of 6℃ for 2 h | 506.59 |
| SAMN08731970 | Cucumis sativus | Cu-01 | Leaves of plants exposed to an air temperature of 6℃ for 6 h | 565.03 |
| SAMN08731967 | Cucumis sativus | Cu-01 | Leaves of plants exposed to an air temperature of 6℃ for 12 h | 583.59 |
|
| PRJNA701131: Transcriptome responses of grafted cucumber to cold stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17848873 | Cucumis sativus | Jinyou 35 | Leaves of cucumber grafted on pumpkin under normal temperature (25 ℃) | 707.83 |
| SAMN17848870 | Cucumis sativus | Jinyou 35 | Leaves of homografted cucumber under normal temperature (25 ℃) | 630.96 |
| SAMN17848879 | Cucumis sativus | Jinyou 35 | Leaves of cucumber grafted on pumpkin under cold temperature (5 ℃) | 666.44 |
| SAMN17848876 | Cucumis sativus | Jinyou 35 | Leaves of homografted cucumber under cold temperature (5 ℃) | 776.72 |
|
| PRJNA817708: Transcriptome responses to cold stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN26806305 | Cucumis sativus | CT90 | Leaf of tolerant line at 24h after cold treatment of 6 C | 415.03 |
| SAMN26806311 | Cucumis sativus | CT57 | Leaf of sensitive line at 24h after cold treatment of 6 C | 453.4 |
| SAMN26806308 | Cucumis sativus | CT90 | Root of tolerant line at 24h after cold treatment of 6 C | 34.2 |
| SAMN26806314 | Cucumis sativus | CT57 | Root of sensitive line at 24h after cold treatment of 6 C | 25.31 |
|
| PRJNA720243: Transcriptome response of grafted cucumber to drought stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN18643059 | Cucumis sativus | EC1 | Leaf of homografted cucumber plant under control conditions | 861.53 |
| SAMN18643060 | Cucumis sativus | EC1 | Leaf of homografted cucumber plant under drought stress | 925.1 |
| SAMN18643061 | Cucumis sativus | EC1 | Leaf of cucumber plant grafted onto Cucurbits moschata under control conditions | 869.59 |
| SAMN18643062 | Cucumis sativus | EC1 | Leaf of cucumber plant grafted onto Cucurbits moschata under drought stress | 979.23 |
|
| PRJEB7612: Transcriptome response to silicon treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMEA3105050 | Cucumis sativus | B10 | Leaves and stems of untreated plants | 521.3 |
| SAMEA3105054 | Cucumis sativus | B10 | Leaves and stems of plants under silicon treatment | 592.68 |
|
| PRJNA307279: Transcriptome profiles of grafted plants under Pi stress (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04457411 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants (with mature leaves removed) under +Pi for 24 h | 290.79 |
| SAMN04457412 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants (with mature leaves removed) under -Pi for 24 h | 282.5 |
| SAMN04457417 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants under +Pi for 24 h | 273.38 |
| SAMN04457418 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants under -Pi for 24 h | 294.96 |
| SAMN04457423 | Cucumis sativus | Chinese Long | Developing leaf of non-grafted cucumber plants under +Pi for 24 h | 273.92 |
| SAMN04457424 | Cucumis sativus | Chinese Long | Developing leaf of non-grafted cucumber plants under -Pi for 24 h | 292.08 |
| SAMN04457413 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants (with mature leaves removed) under +Pi for 24 h | 236.15 |
| SAMN04457414 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants (with mature leaves removed) under -Pi for 24 h | 258.08 |
| SAMN04457419 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants under +Pi for 24 h | 223.04 |
| SAMN04457420 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants under -Pi for 24 h | 252.1 |
| SAMN04457425 | Cucumis sativus | Chinese Long | Shoot apex of non-grafted cucumber plants under +Pi for 24 h | 213.34 |
| SAMN04457426 | Cucumis sativus | Chinese Long | Shoot apex of non-grafted cucumber plants under -Pi for 24 h | 223.98 |
| SAMN04457415 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants (with stock leaves removed) under +Pi for 24 h | 114.84 |
| SAMN04457416 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants (with stock leaves removed) under -Pi for 24 h | 117.9 |
| SAMN04457421 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants under +Pi for 24 h | 115.59 |
| SAMN04457422 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants under -Pi for 24 h | 107.07 |
| SAMN04457427 | Cucumis sativus | Chinese Long | Root of non-grafted cucumber plants under +Pi for 24 h | 88.12 |
| SAMN04457428 | Cucumis sativus | Chinese Long | Root of non-grafted cucumber plants under -Pi for 24 h | 98.98 |
| SAMN04457397 | Cucumis sativus | Chinese long | Lamina under +Pi for 12 h | 1891.93 |
| SAMN04457398 | Cucumis sativus | Chinese long | Lamina under -Pi for 12 h | 2137.18 |
| SAMN04457399 | Cucumis sativus | Chinese long | Major vein under +Pi for 12 h | 809 |
| SAMN04457400 | Cucumis sativus | Chinese long | Major vein under -Pi for 12 h | 1078.55 |
| SAMN04457401 | Cucumis sativus | Chinese long | Petiole vascular tissue under +Pi for 12 h | 382.27 |
| SAMN04457402 | Cucumis sativus | Chinese long | Petiole vascular tissue under -Pi for 12 h | 316.97 |
| SAMN04457403 | Cucumis sativus | Chinese long | Phloem sap under +Pi for 12 h | 98.88 |
| SAMN04457404 | Cucumis sativus | Chinese long | Phloem sap under -Pi for 12 h | 109.09 |
| SAMN04457405 | Cucumis sativus | Chinese long | Internode vascular tissue under +Pi for 12 h | 122.03 |
| SAMN04457406 | Cucumis sativus | Chinese long | Internode vascular tissue under -Pi for 12 h | 130.3 |
| SAMN04457407 | Cucumis sativus | Chinese long | Shoot apex under +Pi for 12 h | 299.69 |
| SAMN04457408 | Cucumis sativus | Chinese long | Shoot apex under -Pi for 12 h | 381.02 |
| SAMN04457409 | Cucumis sativus | Chinese long | Root under +Pi for 12 h | 101.75 |
| SAMN04457410 | Cucumis sativus | Chinese long | Root under -Pi for 12 h | 73.53 |
|
| PRJNA523714: Transcriptome profiling of C. campestris-connected cucumber plant clusters under nitrogen-depleted condition (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10987397 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-replete condition (both cucumber plants supplied with 10 mM KNO3) after 0 hour | 839.58 |
| SAMN10987421 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 2 hours | 808.76 |
| SAMN10987445 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 8 hours | 790.75 |
| SAMN10987469 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 48 hours | 942.34 |
| SAMN10987406 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 2 hours | 975.64 |
| SAMN10987430 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 8 hours | 982.32 |
| SAMN10987454 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 48 hours | 1060.59 |
| SAMN10987415 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 2 hours | 818.18 |
| SAMN10987439 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 8 hours | 753.68 |
| SAMN10987463 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 48 hours | 850.42 |
| SAMN10987400 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-replete condition (both cucumber plants supplied with 10 mM KNO3) after 0 hour | 67.38 |
| SAMN10987424 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 2 hours | 51.88 |
| SAMN10987448 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 8 hours | 39 |
| SAMN10987472 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 48 hours | 63.77 |
| SAMN10987409 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 2 hours | 47.49 |
| SAMN10987433 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 8 hours | 40.75 |
| SAMN10987457 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 48 hours | 67.15 |
| SAMN10987418 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 2 hours | 37.48 |
| SAMN10987442 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 8 hours | 42 |
| SAMN10987466 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 48 hours | 54.88 |
|
| PRJNA765376: Transcriptome responses to Sulfur (S) fumigation (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN21555952 | Cucumis sativus | Chinese Long | Non sulfur-fumigated ovaries at 0 days post pollination | 228.82 |
| SAMN21555953 | Cucumis sativus | Chinese Long | Sulfur-fumigated ovaries at 0 days post pollination | 201.15 |
| SAMN21555954 | Cucumis sativus | Chinese Long | Non sulfur-fumigated commercial fruits at 12 days post pollination | 147.08 |
| SAMN21555955 | Cucumis sativus | Chinese Long | Sulfur-fumigated commercial fruits at 12 days post pollination | 144.75 |
| SAMN21555950 | Cucumis sativus | Chinese Long | Non sulfur-fumigated mature leaves | 648.07 |
| SAMN21555951 | Cucumis sativus | Chinese Long | Sulfur-fumigated mature leaves | 730.03 |
| SAMN21555948 | Cucumis sativus | Chinese Long | Non sulfur-fumigated young leaves | 596.08 |
| SAMN21555949 | Cucumis sativus | Chinese Long | Sulfur-fumigated young leaves | 576.08 |
|
| PRJNA634519: Transcriptome response to high temperature stress (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14998224 | Cucumis sativus | Chinese Long | Leaves of untreated plants | 662.38 |
| SAMN14998221 | Cucumis sativus | Chinese Long | Leaves of plants under heat treatment at 42℃ for 3 hours | 607.79 |
| SAMN14998218 | Cucumis sativus | Chinese Long | Leaves of plants under heat treatment at 42℃ for 6 hours | 636.95 |
|
| PRJNA748460: Transcriptome profiling of male flower development under heat stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN20335859 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 0-3 mm under normal conditions | 179.31 |
| SAMN20335871 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 0-3 mm under heat stress | 150.56 |
| SAMN20335862 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 3-6 mm under normal conditions | 168.66 |
| SAMN20335874 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 3-6 mm under heat stress | 126.48 |
| SAMN20335865 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 6-9 mm under normal conditions | 174.34 |
| SAMN20335877 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 6-9 mm under heat stress | 151.17 |
| SAMN20335868 | Cucumis sativus | B80 | Anthers of male flowers with lengths of >9 mm under normal conditions | 140.68 |
| SAMN20335880 | Cucumis sativus | B80 | Anthers of male flowers with lengths of >9 mm under heat stress | 130.06 |
|
| PRJNA380322: Transcriptome responses to temperature and photoperiod (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06640661 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under low temperature, short day | 142.1 |
| SAMN06640663 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under high temperature, short day | 138.04 |
| SAMN06640662 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under low temperature, long day | 146.37 |
| SAMN06640664 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under high temperature, long day | 143.23 |
|
| PRJNA475903: Transcriptome responses to photoperiod treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09405568 | Cucumis sativus | SWCC8 | Leaves of plant at 0 day of photoperiod treatment | 545.42 |
| SAMN09405577 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 7, 14 and 21 days of equal-day treatment | 449.66 |
| SAMN09405571 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 7, 14 and 21 days of short-day treatment | 672.13 |
| SAMN09405580 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 37 and 44 days of equal-day treatment | 401.85 |
| SAMN09405574 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 37 and 44 days of short-day treatment | 415.84 |
| SAMN09405583 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 52 and 59 days of equal-day treatment | 541.99 |
|
| PRJNA476021: Transcriptome responses to different ratios of blue and red light (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09425165 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 5 days | 410.68 |
| SAMN09425169 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 10 days | 323.18 |
| SAMN09425173 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 15 days | 282.97 |
| SAMN09425167 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 5 days | 399.7 |
| SAMN09425171 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 10 days | 231.37 |
| SAMN09425175 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 15 days | 255.93 |
|
| PRJNA782229: Transcriptome profiling of fruit development under different photoperiod treatment (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SRX13518806 | Cucumis sativus | CC3 | Fruits at 10 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 66.11 |
| SRX13518810 | Cucumis sativus | CC3 | Fruits at 10 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 104.87 |
| SRX13518829 | Cucumis sativus | CC3 | Fruits at 20 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 65.29 |
| SRX13518813 | Cucumis sativus | CC3 | Fruits at 20 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 66.01 |
| SRX13518850 | Cucumis sativus | CC3 | Fruits at 30 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 92.11 |
| SRX13518816 | Cucumis sativus | CC3 | Fruits at 30 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 77.26 |
| SRX13518808 | Cucumis sativus | CC3 | Fruits at 40 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 132.42 |
| SRX13518820 | Cucumis sativus | CC3 | Fruits at 40 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 57.94 |
| SRX13518823 | Cucumis sativus | SWCC8 | Fruits at 10 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 81.97 |
| SRX13518836 | Cucumis sativus | SWCC8 | Fruits at 10 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 153.18 |
| SRX13518826 | Cucumis sativus | SWCC8 | Fruits at 20 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 84.8 |
| SRX13518839 | Cucumis sativus | SWCC8 | Fruits at 20 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 88.13 |
| SRX13518830 | Cucumis sativus | SWCC8 | Fruits at 30 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 133.29 |
| SRX13518843 | Cucumis sativus | SWCC8 | Fruits at 30 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 133.74 |
| SRX13518833 | Cucumis sativus | SWCC8 | Fruits at 40 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 195.82 |
| SRX13518846 | Cucumis sativus | SWCC8 | Fruits at 40 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 195.84 |
|
| PRJNA437579: Root transcriptome responses to salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08668092 | Cucumis sativus | Jinchun No. 2 | Fresh root apexes (0-2 mm from the root tip) from seedlings without NaCl treatment | 57.72 |
| SAMN08668098 | Cucumis sativus | Jinchun No. 2 | Fresh root apexes (0-2 mm from the root tip) from seedlings after 24 hours treatment with 75 mM NaCl | 19.37 |
|
| PRJNA477930: Transcriptome responses to salt stress and silicon treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09487602 | Cucumis sativus | JinYou 1 | Leaves of untreated plants | 1168.04 |
| SAMN09487597 | Cucumis sativus | JinYou 1 | Leaves of plants treated with silicon for three days | 774.86 |
| SAMN09487599 | Cucumis sativus | JinYou 1 | Leaves of plants treated with salt for three days | 931.14 |
| SAMN09487594 | Cucumis sativus | JinYou 1 | Leaves of plants treated with salt and silicon for three days | 939.67 |
|
| PRJNA511946: Transcriptome response to salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10653474 | Cucumis sativus | JinYou 1 | Roots of non-stressed plants | 57.35 |
| SAMN10653467 | Cucumis sativus | JinYou 1 | Roots of plants under salt stress for 3 days | 62.05 |
|
| PRJNA524275: Transcriptome profiling of C. campestris-connected cucumber plant clusters under salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11020240 | Cucumis sativus | Jinyou 35 | Leaves, both cucumber plants were mock treated for 12/24 h | 760.31 |
| SAMN11020243 | Cucumis sativus | Jinyou 35 | Leaves of plant treated with 50 mM NaCl for 12 h, while the other was mock treated | 863.38 |
| SAMN11020246 | Cucumis sativus | Jinyou 35 | Leaves of mock treated plant, while the other was treated with 50 mM NaCl for 12 h | 850.3 |
| SAMN11020249 | Cucumis sativus | Jinyou 35 | Leaves, both cucumber plants treated with 50 mM NaCl for 12 h | 996.53 |
| SAMN11020252 | Cucumis sativus | Jinyou 35 | Leaves of plant treated with 50 mM NaCl for 24 h, while the other was mock treated | 882.27 |
| SAMN11020255 | Cucumis sativus | Jinyou 35 | Leaves of mock treated plant, while the other was treated with 50 mM NaCl for 24 h | 936.44 |
| SAMN11020258 | Cucumis sativus | Jinyou 35 | Leaves, both cucumber plants treated with 50 mM NaCl for 24 h | 881.71 |
| SAMN11020261 | Cucumis sativus | Jinyou 35 | Roots, both cucumber plants were mock treated for 12/24 h | 41.17 |
| SAMN11020264 | Cucumis sativus | Jinyou 35 | Roots of plant treated with 50 mM NaCl for 12 h, while the other was mock treated | 40.99 |
| SAMN11020267 | Cucumis sativus | Jinyou 35 | Roots of mock treated plant, while the other was treated with 50 mM NaCl for 12 h | 49.55 |
| SAMN11020270 | Cucumis sativus | Jinyou 35 | Roots, both cucumber plants treated with 50 mM NaCl for 12 h | 43.11 |
| SAMN11020273 | Cucumis sativus | Jinyou 35 | Roots of plant treated with 50 mM NaCl for 24 h, while the other was mock treated | 48.8 |
| SAMN11020276 | Cucumis sativus | Jinyou 35 | Roots of mock treated plant, while the other was treated with 50 mM NaCl for 24 h | 45.26 |
| SAMN11020279 | Cucumis sativus | Jinyou 35 | Roots, both cucumber plants treated with 50 mM NaCl for 24 h | 45.55 |
|
| PRJNA563457: Transcriptome responses to H2S-regulated salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12674486 | Cucumis sativus | Chunxiaqiuwang | Leaves of untreated plants | 572.91 |
| SAMN12674489 | Cucumis sativus | Chunxiaqiuwang | Leaves of plants treated with 200 mM NaCl for 7 days | 430.18 |
| SAMN12674492 | Cucumis sativus | Chunxiaqiuwang | Leaves of plants treated with 200 mM NaCl + 15.0 uM NaHS for 7 days | 676.06 |
|
| PRJNA678740: Transcriptome responses to long-term waterlogging (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN16811424 | Cucumis sativus | DH2 | Roots of tolerant plants untreated, cultivated in optimal conditions | 63.99 |
| SAMN16811567 | Cucumis sativus | DH2 | Roots of tolerant plants after 7 days of waterlogging and 14 days of recovery period | 47.72 |
| SAMN16811530 | Cucumis sativus | DH2 | Roots of non-primed tolerant plants, waterlogged for 7 days only once | 25.35 |
| SAMN16811572 | Cucumis sativus | DH2 | Roots of primed tolerant plants; waterlogged twice after 14 days of recovery period | 22.71 |
| SAMN16811671 | Cucumis sativus | DH4 | Roots of sensitive plants untreated, cultivated in optimal conditions | 66.96 |
| SAMN16811697 | Cucumis sativus | DH4 | Roots of sensitive plants after 7 days of waterlogging and 14 days of recovery period | 66.08 |
| SAMN16811676 | Cucumis sativus | DH4 | Roots of non-primed sensitive plants; waterlogged for 7 days only once | 17.78 |
| SAMN16811714 | Cucumis sativus | DH4 | Roots of primed sensitive plants; waterlogged twice after 14 days of recovery period | 18.86 |
|
| PRJNA799460: Transcriptome responses of hypocotyl to different waterlogging stress treatments (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN25172608 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber under control conditions for 48 hours | 194.23 |
| SAMN25172611 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber under waterlogging for 48 hours | 85.6 |
| SAMN25172614 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber treated with 10uM ACC waterlogging for 48 hours | 86.45 |
| SAMN25172617 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber treated with 10uM AOA waterlogging for 48 hours | 100.8 |
|
| PRJNA844418: Transcriptome responses of different tissues of hypocotyl to waterlogging (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN28817254 | Cucumis sativus | Zaoer-N | Hypocotyl epidermis of cucumber under control conditions for 48 hours | 174.45 |
| SAMN28817245 | Cucumis sativus | Zaoer-N | Hypocotyl epidermis of cucumber under waterlogging stress for 48 hours | 144.53 |
| SAMN28817257 | Cucumis sativus | Zaoer-N | Hypocotyl vascular bundles of cucumber under control conditions for 48 hours | 169.94 |
| SAMN28817248 | Cucumis sativus | Zaoer-N | Hypocotyl vascular bundle of cucumber under waterlogging stress for 48 hours | 116.62 |
| SAMN28817260 | Cucumis sativus | Zaoer-N | Hypocotyl basal tissue of cucumber under control conditions for 48 hours | 125.44 |
| SAMN28817251 | Cucumis sativus | Zaoer-N | Hypocotyl basic tissue of cucumber under waterlogging stress for 48 hours | 173.75 |
|
| PRJNA563186: Transcriptome responses to Alternaria cucumerina (alternaria leaf spot) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12670099 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 2 days post mock treatment | 568.49 |
| SAMN12670096 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 2 days post inoculation with Alternaria cucumerina | 264.3 |
| SAMN12670105 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 6 days post mock treatment | 532.19 |
| SAMN12670102 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 6 days post inoculation with Alternaria cucumerina | 347.4 |
| SAMN12670111 | Cucumis sativus | D1322 | Leaf of resistant line at 2 days post mock treatment | 424.29 |
| SAMN12670108 | Cucumis sativus | D1322 | Leaf of resistant line at 2 days post inoculation with Alternaria cucumerina | 368.09 |
| SAMN12670117 | Cucumis sativus | D1322 | Leaf of resistant line at 6 days post mock treatment | 583.17 |
| SAMN12670114 | Cucumis sativus | D1322 | Leaf of resistant line at 6 days post inoculation with Alternaria cucumerina | 369.06 |
|
| PRJNA388584: Transcriptome responses to downy mildew (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN07179433 | Cucumis sativus | PI 197088 | Leaf of resistant line at 0 h post inoculation with Pseudoperonospora cubensis | 877.97 |
| SAMN07179434 | Cucumis sativus | PI 197088 | Leaf of resistant line at 6 h post inoculation with Pseudoperonospora cubensis | 791.6 |
| SAMN07179435 | Cucumis sativus | PI 197088 | Leaf of resistant line at 24 h post inoculation with Pseudoperonospora cubensis | 634.25 |
|
| PRJNA544259: Transcriptome responses to downy mildew (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11831000 | Cucumis sativus | HS279 | Leaves of plants at three days post mock treatment | 522.62 |
| SAMN11831003 | Cucumis sativus | HS279 | Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) | 571.55 |
| SAMN11831006 | Cucumis sativus | NIL DM4.1.2 | Leaves of plants at three days post mock treatment | 450.37 |
| SAMN11831009 | Cucumis sativus | NIL DM4.1.2 | Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) | 565 |
| SAMN11831012 | Cucumis sativus | NIL DM4.1.3 | Leaves of plants at three days post mock treatment | 555.18 |
| SAMN11831015 | Cucumis sativus | NIL DM4.1.3 | Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) | 558.17 |
|
| PRJNA776553: Garlic volatile diallyl disulfide (DADS) induced cucumber resistance to downy mildew (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN22799462 | Cucumis sativus | CCMC | Leaf of plant uninoculated with P. cubensis and not treated with DADS | 1093.49 |
| SAMN22799464 | Cucumis sativus | CCMC | Leaf of plant uninoculated with P. cubensis and treated with DADS | 951.25 |
| SAMN22799450 | Cucumis sativus | CCMC | Leaf of plant at 4 h post inoculation of P. cubensis and not treated with DADS | 685.05 |
| SAMN22799452 | Cucumis sativus | CCMC | Leaf of plant at 4 h post inoculation of P. cubensis and treated with DADS | 728.07 |
| SAMN22799454 | Cucumis sativus | CCMC | Leaf of plant at 24 h post inoculation of P. cubensis and not treated with DADS | 555.88 |
| SAMN22799456 | Cucumis sativus | CCMC | Leaf of plant at 24 h post inoculation of P. cubensis and treated with DADS | 565.44 |
| SAMN22799458 | Cucumis sativus | CCMC | Leaf of plant at 48 h post inoculation of P. cubensis and not treated with DADS | 878.21 |
| SAMN22799460 | Cucumis sativus | CCMC | Leaf of plant at 48 h post inoculation of P. cubensis and treated with DADS | 610.8 |
|
| PRJNA472169: Transcriptome responses to Fusarium oxysporum (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09228081 | Cucumis sativus | Rijiecheng | Roots of plants at 0 h post inoculation with Foc | 78.14 |
| SAMN09228082 | Cucumis sativus | Rijiecheng | Roots of plants at 24 h post inoculation with Foc | 102.36 |
| SAMN09228083 | Cucumis sativus | Rijiecheng | Roots of plants at 48 h post inoculation with Foc | 88.43 |
| SAMN09228084 | Cucumis sativus | Rijiecheng | Roots of plants at 96 h post inoculation with Foc | 103.28 |
| SAMN09228085 | Cucumis sativus | Rijiecheng | Roots of plants at 192 h post inoculation with Foc | 82.23 |
|
| PRJNA484083: Transcriptome profiling of cucumber Fusarium wilt resistance induced by intercropping with celery (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09759444 | Cucumis sativus | Fuyang | Roots of monocultured resistant plants inoculated with Fusarium oxysporum | 28.5 |
| SAMN09759446 | Cucumis sativus | Fuyang | Roots of resistant plants intercropped with celery and inoculated with Fusarium oxysporum | 29.54 |
| SAMN09759443 | Cucumis sativus | Tangyan | Roots of monocultured susceptible plants inoculated with Fusarium oxysporum | 37.81 |
| SAMN09759445 | Cucumis sativus | Tangyan | Roots of susceptible plants intercropped with celery and inoculated with Fusarium oxysporum | 30.68 |
|
| PRJNA750577: Transcriptome responses of CsRbohB-RNAi lines to Fusarium oxysporum (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN20474027 | Cucumis sativus | CCMC | Roots of control plants at 48 hours | 52.19 |
| SAMN20474030 | Cucumis sativus | CCMC | Roots of plants at 48 hours post inoculation with Foc | 49.81 |
| SAMN20474033 | Cucumis sativus | CsRbohB-RNAi | Roots of control RNAi plants at 48 hours | 50.28 |
| SAMN20474036 | Cucumis sativus | CsRbohB-RNAi | Roots of RNAi plants at 48 hours post inoculation with Foc | 55.82 |
|
| PRJNA419665: Transcriptome responses to nematode infection (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08095139 | Cucumis sativus | CC3 | Roots of susceptible lines at 0 day post inoculation with Meloidogyne incognita | 69.49 |
| SAMN08095141 | Cucumis sativus | CC3 | Roots of susceptible lines at 1 day post inoculation with Meloidogyne incognita | 84.71 |
| SAMN08095143 | Cucumis sativus | CC3 | Roots of susceptible lines at 2 days post inoculation with Meloidogyne incognita | 84.12 |
| SAMN08095152 | Cucumis sativus | CC3 | Roots of susceptible lines at 3 days post inoculation with Meloidogyne incognita | 73.53 |
| SAMN08095163 | Cucumis sativus | IL10-1 | Roots of resistant lines at 0 day post inoculation with Meloidogyne incognita | 50.96 |
| SAMN08095169 | Cucumis sativus | IL10-1 | Roots of resistant lines at 1 day post inoculation with Meloidogyne incognita | 81.4 |
| SAMN08095179 | Cucumis sativus | IL10-1 | Roots of resistant lines at 2 days post inoculation with Meloidogyne incognita | 78.88 |
| SAMN08095185 | Cucumis sativus | IL10-1 | Roots of resistant lines at 3 days post inoculation with Meloidogyne incognita | 81.97 |
|
| PRJNA445328: Transcriptome responses to biocontrol agent Trichoderma longibrachiatum (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08779020 | Cucumis sativus | Chinese Long | Leaves from non-inoculated (with Trichoderma) and non-challenged (with B. cinerea) plants | 747.75 |
| SAMN08779324 | Cucumis sativus | Chinese Long | Leaves from inoculated (with Trichoderma) and non-challenged (with B. cinerea) plants | 346.32 |
| SAMN08394921 | Cucumis sativus | Chinese Long | Leaves from inoculated (with Trichoderma) and challenged (with B. cinerea) plants | 184.98 |
|
| PRJNA285071: Transcriptome responses to Pseudoperonospora cubensis (downy mildew) (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN03737503 | Cucumis sativus | Vlaspik | Leaf of susceptible line under mock treatment | 129.39 |
| SAMN03734820 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 1 day post inoculation with Pseudoperonospora cubensis | 104.94 |
| SAMN03737532 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 2 days post inoculation with Pseudoperonospora cubensis | 150.06 |
| SAMN03737500 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 3 days post inoculation with Pseudoperonospora cubensis | 202.84 |
| SAMN03737501 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 4 days post inoculation with Pseudoperonospora cubensis | 141.01 |
| SAMN03737502 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 6 days post inoculation with Pseudoperonospora cubensis | 129.41 |
| SAMN03737504 | Cucumis sativus | PI 197088 | Leaf of resistant line under mock treatment | 128.87 |
| SAMN03737508 | Cucumis sativus | PI 197088 | Leaf of resistant line at 1 day post inoculation with Pseudoperonospora cubensis | 86.75 |
| SAMN03737509 | Cucumis sativus | PI 197088 | Leaf of resistant line at 2 days post inoculation with Pseudoperonospora cubensis | 402.77 |
| SAMN03737510 | Cucumis sativus | PI 197088 | Leaf of resistant line at 3 days post inoculation with Pseudoperonospora cubensis | 439.52 |
| SAMN03737511 | Cucumis sativus | PI 197088 | Leaf of resistant line at 4 days post inoculation with Pseudoperonospora cubensis | 534.89 |
| SAMN03737512 | Cucumis sativus | PI 197088 | Leaf of resistant line at 6 days post inoculation with Pseudoperonospora cubensis | 658.6 |
|
| PRJNA292785: Transcriptome response by physcion and chrysophanol against cucumber powdery mildew (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN03988531 | Cucumis sativus | Changchunmici | Leaves of plants mock treated before inoculation with Sphaerotheca fuliginea for 3 days | 518.71 |
| SAMN03988533 | Cucumis sativus | Changchunmici | Leaves of plants treated with chrysophano before inoculation with Sphaerotheca fuliginea for 3 days | 466.04 |
| SAMN03988535 | Cucumis sativus | Changchunmici | Leaves of plants treated with physcion before inoculation with Sphaerotheca fuliginea for 3 days | 486.64 |
| SAMN03988538 | Cucumis sativus | Changchunmici | Leaves of plants treated with physcion and chrysophano before inoculation with Sphaerotheca fuliginea for 3 days | 539.56 |
|
| PRJNA321023: Transcriptome responses to powdery mildew disease (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04962346 | Cucumis sativus | D8 | Leaves of susceptible plants at 0 h post inoculation with powdery mildew fungus | 322.79 |
| SAMN04962349 | Cucumis sativus | D8 | Leaves of susceptible plants at 48 h post inoculation with powdery mildew fungus | 238.33 |
| SAMN04962345 | Cucumis sativus | SSL508-28 | Leaves of resistant plants at 0 h post inoculation with powdery mildew fungus | 362.49 |
| SAMN04962354 | Cucumis sativus | SSL508-28 | Leaves of resistant plants at 48 h post inoculation with powdery mildew fungus | 279.14 |
|
| PRJNA603869: Transcriptome responses to powdery mildew disease (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN13943385 | Cucumis sativus | Q10 | Leaf of susceptible line at 24 h post mock treatment | 575 |
| SAMN13943392 | Cucumis sativus | Q10 | Leaf of susceptible line at 24 h post inoculation with powdery mildew fungus | 546.01 |
| SAMN13943388 | Cucumis sativus | Q10 | Leaf of susceptible line at 48 h post mock treatment | 707.3 |
| SAMN13943395 | Cucumis sativus | Q10 | Leaf of susceptible line at 48 h post inoculation with powdery mildew fungus | 757.73 |
| SAMN13943398 | Cucumis sativus | XY09-118 | Leaf of resistant line at 24 h post mock treatment | 531.45 |
| SAMN13943405 | Cucumis sativus | XY09-118 | Leaf of resistant line at 24 h post inoculation with powdery mildew fungus | 548.58 |
| SAMN13943402 | Cucumis sativus | XY09-118 | Leaf of resistant line at 48 h post mock treatment | 640.52 |
| SAMN13943408 | Cucumis sativus | XY09-118 | Leaf of resistant line at 48 h post inoculation with powdery mildew fungus | 665.15 |
|
| PRJNA816625: Transcriptome response to Podosphaera xanthii (powdery mildew) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN26686559 | Cucumis sativus | B21-a-2-2-2 | Cotyledon of susceptible line at 0 h post inoculation with Podosphaera xanthii | 894.43 |
| SAMN26686562 | Cucumis sativus | B21-a-2-1-2 | Cotyledon of resistant line at 0 h post inoculation with Podosphaera xanthii | 724.3 |
| SAMN26686565 | Cucumis sativus | B21-a-2-2-2 | Cotyledon of susceptible line at 6 h post inoculation with Podosphaera xanthii | 982.71 |
| SAMN26686568 | Cucumis sativus | B21-a-2-1-2 | Cotyledon of resistant line at 6 h post inoculation with Podosphaera xanthii | 873.74 |
|
| PRJNA704621: Transcriptome responses to Pseudomonas syringae pv. lachrymans (Psl) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN18049944 | Cucumis sativus | B10 | Leaf of susceptible line without Psl 814/98 inoculation | 542.53 |
| SAMN18050103 | Cucumis sativus | B10 | Leaf of susceptible line at 1 day post inoculation with Psl 814/98 | 420.76 |
| SAMN18050492 | Cucumis sativus | B10 | Leaf of susceptible line at 3 days post inoculation with Psl 814/98 | 259.27 |
| SAMN18050892 | Cucumis sativus | Gy14 | Leaf of resistant line without Psl 814/98 inoculation | 647.37 |
| SAMN18051058 | Cucumis sativus | Gy14 | Leaf of resistant line at 1 day post inoculation with Psl 814/98 | 486.57 |
| SAMN18051198 | Cucumis sativus | Gy14 | Leaf of resistant line at 3 days post inoculation with Psl 814/98 | 291.25 |
|
| PRJNA345040: Transcriptomes of peels from fruit differing in age-related resistance to Phytophthora capsici (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN05856085 | Cucumis sativus | Vlaspik | Fruit peel collected at 8 days post pollination (susceptible age) | 535.32 |
| SAMN05856088 | Cucumis sativus | Vlaspik | Fruit peel collected at 16 days post pollination (resistant age) | 268.24 |
| SAMN05856091 | Cucumis sativus | Gy14 | Fruit peel collected at 8 days post pollination (susceptible age) | 506.44 |
| SAMN05856094 | Cucumis sativus | Gy14 | Fruit peel collected at 16 days post pollination (susceptible age) | 189.21 |
|
| PRJNA575868: Transcriptomes of fruit peel in response to Phytophthora capsici (fruit rot) (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12912830 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 0 h (Experiment 1) | 377.84 |
| SAMN12912831 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 1) | 391.28 |
| SAMN12912832 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 1) | 189.94 |
| SAMN12912833 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 48 h (Experiment 1) | 95.09 |
| SAMN12912838 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 0 h (Experiment 2) | 221.19 |
| SAMN12912839 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 2 h (Experiment 2) | 205.61 |
| SAMN12912852 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 2 h (Experiment 2) | 209.28 |
| SAMN12912840 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 4 h (Experiment 2) | 205.78 |
| SAMN12912853 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 2) | 183.02 |
| SAMN12912841 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 8 h (Experiment 2) | 191.04 |
| SAMN12912854 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 8 h (Experiment 2) | 146.82 |
| SAMN12912842 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 12 h (Experiment 2) | 151.49 |
| SAMN12912855 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 12 h (Experiment 2) | 102.12 |
| SAMN12912843 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 18 h (Experiment 2) | 127.65 |
| SAMN12912856 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 18 h (Experiment 2) | 118.89 |
| SAMN12912844 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 24 h (Experiment 2) | 122.66 |
| SAMN12912857 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 2) | 115.02 |
| SAMN12912834 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 0 h (Experiment 1) | 155.27 |
| SAMN12912835 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 1) | 179.13 |
| SAMN12912836 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 1) | 205.05 |
| SAMN12912837 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 48 h (Experiment 1) | 147.28 |
| SAMN12912845 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 0 h (Experiment 2) | 131.78 |
| SAMN12912846 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 2 h (Experiment 2) | 134.6 |
| SAMN12912858 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 2 h (Experiment 2) | 136.43 |
| SAMN12912847 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 4 h (Experiment 2) | 157.92 |
| SAMN12912859 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 2) | 151.93 |
| SAMN12912848 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 8 h (Experiment 2) | 159.19 |
| SAMN12912860 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 8 h (Experiment 2) | 120.62 |
| SAMN12912849 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 12 h (Experiment 2) | 124.55 |
| SAMN12912861 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 12 h (Experiment 2) | 113.5 |
| SAMN12912850 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 18 h (Experiment 2) | 143.01 |
| SAMN12912862 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 18 h (Experiment 2) | 145.62 |
| SAMN12912851 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 24 h (Experiment 2) | 102.97 |
| SAMN12912863 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 2) | 119.87 |
|
| PRJNA646644: Transcriptome responses to cucumber green mottle mosaic virus (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN15548822 | Cucumis sativus | 229 | Leaf of healthy control, 3 days | 818.36 |
| SAMN15548823 | Cucumis sativus | 229 | Leaf of plant at 3 days post inoculation with cucumber green mottle mosaic virus | 507.18 |
| SAMN15548824 | Cucumis sativus | 229 | Leaf of healthy control, 20 days | 1195.29 |
| SAMN15548825 | Cucumis sativus | 229 | Leaf of plant at 20 days post inoculation with cucumber green mottle mosaic virus | 623.54 |
|
| PRJNA701150: Transcriptome responses to cucumber green mottle mosaic virus (CGMMV) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17849263 | Cucumis sativus | KS | Leaves of healthy plants | 579.61 |
| SAMN17849283 | Cucumis sativus | KS | Bright yellow islands from CGMMV-infected leaves exhibiting early post-recovery stage symptoms | 761.16 |
| SAMN17849285 | Cucumis sativus | KS | Dark green islands from CGMMV-infected leaves exhibiting early post-recovery stage symptoms | 693.24 |
| SAMN17849284 | Cucumis sativus | KS | Bright yellow islands from CGMMV-infected leaves exhibiting late post-recovery stage symptoms | 786.37 |
| SAMN17849286 | Cucumis sativus | KS | Dark green islands from CGMMV-infected leaves exhibiting late post-recovery stage symptoms | 990.81 |
|
| PRJNA837466: Transcriptome response to Prunus necrotic ringspot virus (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN28204068 | Cucumis sativus | NA | Leaf of cucumber seedlings at 12 days of mock treatment | 881.74 |
| SAMN28204071 | Cucumis sativus | NA | Leaf of cucumber seedlings at 12 days post-inoculation with Prunus necrotic ringspot virus | 662.44 |
|
| PRJNA307098: Transcriptome profiling of corolla opening (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04372266 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 1 day after labeling | 424.89 |
| SAMN04372269 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 3 days after labeling | 499.04 |
| SAMN04372272 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 4 days after labeling | 392.37 |
| SAMN04372275 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 5 days after labeling | 214.97 |
| SAMN04372278 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 1 day after labeling | 398.45 |
| SAMN04372281 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 3 days after labeling | 471.88 |
| SAMN04372284 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 4 days after labeling | 480.39 |
| SAMN04372287 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 5 days after labeling | 538.22 |
| SAMN04372291 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 7 days after labeling | 427.38 |
| SAMN04372294 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 8 days after labeling | 452.26 |
| SAMN04372289 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 9 days after labeling | 157.86 |
|
| PRJNA783663: Time-course transcriptome of multicellular trichomes (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN23441956 | Cucumis sativus | 3542 | Cotyledon at 18 hours after seed soaking | 102.13 |
| SAMN23441959 | Cucumis sativus | 3542 | Cotyledon at 36 hours after seed soaking | 238.66 |
| SAMN23441962 | Cucumis sativus | 3542 | Cotyledon at 60 hours after seed soaking | 253.59 |
| SAMN23441965 | Cucumis sativus | 3542 | Cotyledon at 72 hours after seed soaking | 381.25 |
| SAMN23441968 | Cucumis sativus | 3542 | Cotyledon at 96 hours after seed soaking | 760.29 |
|
| PRJNA258122: Transcriptomes of early fruits (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN02988317 | Cucumis sativus | 408 | Early fruits of about 2-4cm | 201.93 |
| SAMN02988319 | Cucumis sativus | 409 | Early fruits of about 2-4cm | 212.83 |
|
| PRJNA381300: Transcriptome profiling of fruits and leaves (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06673860 | Cucumis sativus | Chinese Long | Leaf | 490.77 |
| SAMN06673861 | Cucumis sativus | Chinese Long | Fruit flesh at 10 days post anthesis | 234.57 |
| SAMN06673862 | Cucumis sativus | Chinese Long | Fruit flesh at 20 days post anthesis | 144.37 |
| SAMN06673863 | Cucumis sativus | Chinese Long | Fruit flesh at 30 days post anthesis | 121.09 |
| SAMN06673864 | Cucumis sativus | Chinese Long | Fruit flesh at 40 days post anthesis | 156.38 |
| SAMN06673866 | Cucumis sativus | Chinese Long | Fruit flesh at 40 days post anthesis, treated with ethylene for 1.5 h | 196.52 |
|
| PRJNA448682: Transcriptome profiling of fruit development (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08862945 | Cucumis sativus | YanBai | Flesh at 3 days after self-pollination | 103.07 |
| SAMN08862951 | Cucumis sativus | YanBai | Flesh at 6 days after self-pollination | 88.31 |
| SAMN08862949 | Cucumis sativus | YanBai | Flesh at 9 days after self-pollination | 74.05 |
| SAMN08862946 | Cucumis sativus | YanBai | Peel at 3 days after self-pollination | 132.7 |
| SAMN08862944 | Cucumis sativus | YanBai | Peel at 6 days after self-pollination | 119.58 |
| SAMN08862950 | Cucumis sativus | YanBai | Peel at 9 days after self-pollination | 75.4 |
|
| PRJNA517913: Transcriptomes of fruits in lines with different carpel numbers (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10847189 | Cucumis sativus | 32X | Fruits at anthesis (carpel number=3) | 175.83 |
| SAMN10847186 | Cucumis sativus | GFC | Fruits at anthesis (carpel number=5) | 154.63 |
|
| PRJNA558838: Transcriptome profiling of fruit development (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12500541 | Cucumis sativus | Gy14 | Fruit peel at 8 days post pollination | 220.11 |
| SAMN12500542 | Cucumis sativus | Gy14 | Fruit peel at 16 days post pollination | 87.9 |
| SAMN12500543 | Cucumis sativus | Poinsett 76 | Fruit peel at 8 days post pollination | 377.84 |
| SAMN12500544 | Cucumis sativus | Poinsett 76 | Fruit peel at 16 days post pollination | 155.27 |
|
| PRJNA564950: Transcriptome profiling of mesocarp development (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12727350 | Cucumis sativus | D8 | Mesocarps at 0 day after pollination | 146.63 |
| SAMN12727353 | Cucumis sativus | D8 | Mesocarps at 3 days after pollination | 177.51 |
| SAMN12727356 | Cucumis sativus | D8 | Mesocarps at 6 days after pollination | 189.63 |
| SAMN12727359 | Cucumis sativus | D8 | Mesocarps at 9 days after pollination | 156.01 |
|
| PRJNA647135: Transcriptomes of fruit skin with different colors (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN15577520 | Cucumis sativus | Bai | Fruit skin at 15 days after flowering | 151.06 |
| SAMN15577524 | Cucumis sativus | Lv | Fruit skin at 15 days after flowering | 207.06 |
|
| PRJNA678478: Transcriptome profiling of fruit peels with different colors (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN16803070 | Cucumis sativus | L14 | Yellow mature peel | 54.63 |
| SAMN16803071 | Cucumis sativus | L14 | Green-white young peel | 113.12 |
| SAMN16803072 | Cucumis sativus | L19 | White mature peel | 49.38 |
| SAMN16803073 | Cucumis sativus | L19 | Green-white young peel | 69.94 |
|
| PRJNA707246: Transcriptome profiling of yellow and white fruit flesh (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN18192479 | Cucumis sativus | NA | Yellow fruit flesh at 10 days after pollination | 125.44 |
| SAMN18192488 | Cucumis sativus | NA | White fruit flesh at 10 days after pollination | 127.38 |
| SAMN18192482 | Cucumis sativus | NA | Yellow fruit flesh at 20 days after pollination | 107.18 |
| SAMN18192491 | Cucumis sativus | NA | White fruit flesh at 20 days after pollination | 105.46 |
| SAMN18192485 | Cucumis sativus | NA | Yellow fruit flesh at 30 days after pollination | 45.88 |
| SAMN18192494 | Cucumis sativus | NA | White fruit flesh at 30 days after pollination | 69.06 |
|
| PRJNA817515: Transcriptomes of fruit flesh and peel (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN26791361 | Cucumis sativus | Chuichung | Peel of ripe fruit | 106.81 |
| SAMN26791363 | Cucumis sativus | White Dadagi | Peel of ripe fruit | 26.22 |
| SAMN26791365 | Cucumis sativus | Mini | Peel of ripe fruit | 38.57 |
| SAMN26791362 | Cucumis sativus | Chuichung | Flesh of ripe fruit | 49.56 |
| SAMN26791364 | Cucumis sativus | White Dadagi | Flesh of ripe fruit | 37.18 |
| SAMN26791366 | Cucumis sativus | Mini | Flesh of ripe fruit | 47.25 |
|
| PRJNA660492: Transcriptome profiling of fruit spine development (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN15951074 | Cucumis sativus | NC072 | Fruit spines at stage II (0.2 cm ovary) | 234.58 |
| SAMN15951077 | Cucumis sativus | NC072 | Fruit spines at stage III (0.35 cm ovary) | 243.79 |
| SAMN15951080 | Cucumis sativus | NC072 | Fruit spines at stage IV (0.65 cm ovary) | 282.8 |
| SAMN15951083 | Cucumis sativus | NC073 | Fruit spines at stage II (0.2 cm ovary) | 222.02 |
| SAMN15951086 | Cucumis sativus | NC073 | Fruit spines at stage III (0.35 cm ovary) | 235.61 |
| SAMN15951089 | Cucumis sativus | NC073 | Fruit spines at stage IV (0.65 cm ovary) | 265.54 |
|
| PRJNA852610: Transcriptome profiling of fruit spine (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN29336066 | Cucumis sativus | WZ1 | Fruit spine at 8 days before anthesis | 180.79 |
| SAMN29336069 | Cucumis sativus | WZ1 | Fruit spine at anthesis | 185.37 |
| SAMN29336072 | Cucumis sativus | WZ1 | Fruit spine at 8 days after anthesis | 141.87 |
|
| PRJNA552914: Trancriptome profiling of homo- and hetero-grafted plants (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12221401 | Cucumis sativus | Xintaimici | Leaf of homografting plants (cucumber grafted on cucumber) | 412.16 |
| SAMN12221407 | Cucumis sativus | Xintaimici | Leaf of heterografting plants (cucumber grafted on C. moschata) | 506.04 |
| SAMN12221404 | Cucumis sativus | Xintaimici | Root of homografting plants (cucumber grafted on cucumber) | 27.31 |
| SAMN12221416 | Cucumis sativus | Xintaimici | Root of heterografting plants (C. moschata grafted on cucumber) | 30.7 |
|
| PRJNA317163: Grafting changed silicon metabolism and expression of bloom-forming related genes (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04600319 | Cucumis sativus | Shannong No.5 | Pericarp of non-grafted cucumber (with sparse bloom) | 288.89 |
| SAMN04600321 | Cucumis sativus | Shannong No.5 | Pericarp of non-grafted cucumber treated with 1.7mM silicon for 2 hours (with dense bloom) | 242.54 |
| SAMN04600323 | Cucumis sativus | Shannong No.5 | Pericarp of self-grafted cucumber (with sparse bloom) | 312.49 |
| SAMN04600325 | Cucumis sativus | Shannong No.5 | Pericarp of self-grafted cucumber treated with 1.7mM silicon for 2 hours (with dense bloom) | 312.11 |
| SAMN04600327 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3212' (with sparse bloom) | 250.8 |
| SAMN04600330 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3212' and treated with 1.7mM silicon for 2 hours (with least bloom) | 326.82 |
| SAMN04600332 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3225' (with sparse bloom) | 218.12 |
| SAMN04600334 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3225' and treated with 1.7mM silicon for 2 hours (with dense bloom) | 415.21 |
|
| PRJNA612596: Transcriptomes of virescent leaf and green leaf (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14377560 | Cucumis sativus | 104Y | The first true leaf of virescent leaf mutant | 355.95 |
| SAMN14377563 | Cucumis sativus | EC1 | The first true leaf of wild type plant (green leaf) | 454.87 |
|
| PRJNA312872: Transcriptome atlas of cucumber (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04530052 | Cucumis sativus | 9930 | Flesh of unfertilized ovary | 243.63 |
| SAMN04530054 | Cucumis sativus | 9930 | Flesh of 1-week-old fruit | 356.24 |
| SAMN04530056 | Cucumis sativus | 9930 | Flesh of 2-week-old fruit | 190.77 |
| SAMN04530058 | Cucumis sativus | 9930 | Flesh of 3-week-old fruit | 199.98 |
| SAMN04530051 | Cucumis sativus | 9930 | Peel of unfertilized ovary | 818.29 |
| SAMN04530053 | Cucumis sativus | 9930 | Peel of 1-week-old fruit | 813.86 |
| SAMN04530055 | Cucumis sativus | 9930 | Peel of 2-week-old fruit | 400.05 |
| SAMN04530057 | Cucumis sativus | 9930 | Peel of 3-week-old fruit | 352.1 |
| SAMN04530050 | Cucumis sativus | 9930 | Unfertilized ovary (not grew) | 323.68 |
| SAMN04530047 | Cucumis sativus | 9930 | Female flower | 244.99 |
| SAMN04530049 | Cucumis sativus | 9930 | Male flower | 322.05 |
| SAMN04530048 | Cucumis sativus | 9930 | Male flower bud | 732.77 |
| SAMN04530038 | Cucumis sativus | 9930 | Cotyledon of 4-week-old seedlings | 753.94 |
| SAMN04530037 | Cucumis sativus | 9930 | Hypocotyl of 4-week-old seedlings | 237.41 |
| SAMN04530036 | Cucumis sativus | 9930 | Root of 4-week-old seedlings | 164.69 |
| SAMN04530039 | Cucumis sativus | 9930 | True Leaf of 4-week-old seedlings | 916.23 |
| SAMN04530042 | Cucumis sativus | 9930 | Young Leaf | 1134.33 |
| SAMN04530044 | Cucumis sativus | 9930 | Old leaf | 1380.9 |
| SAMN04530043 | Cucumis sativus | 9930 | Petiole of young leaf | 312.87 |
| SAMN04530045 | Cucumis sativus | 9930 | Petiole of old leaf | 349.36 |
| SAMN04530040 | Cucumis sativus | 9930 | Root | 68.26 |
| SAMN04530041 | Cucumis sativus | 9930 | Stem | 309.28 |
| SAMN04530046 | Cucumis sativus | 9930 | Tendril | 352.93 |
|
| PRJNA752681: Transcriptomes of a dark green genotype (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN20604789 | Cucumis sativus | DG | Leaf blade | 764.46 |
| SAMN20604791 | Cucumis sativus | DG | Petiole | 262.38 |
| SAMN20604790 | Cucumis sativus | DG | Stem | 214.92 |
|
| PRJNA80169: Transcriptomes of different cucumber tissues (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN00738224 | Cucumis sativus | Chinese Long | Ovary | 190.06 |
| SAMN00738223 | Cucumis sativus | Chinese Long | Expanded ovary under fertilization (7 days after flowering) | 187.23 |
| SAMN00738222 | Cucumis sativus | Chinese Long | Expanded ovary not fertilized (7 days after flowering) | 129.23 |
| SAMN00738220 | Cucumis sativus | Chinese Long | Female flower | 557.79 |
| SAMN00738221 | Cucumis sativus | Chinese Long | Male flower | 539.7 |
| SAMN00738225 | Cucumis sativus | Chinese Long | Root | 51.06 |
| SAMN00738219 | Cucumis sativus | Chinese Long | Stem | 243.16 |
| SAMN00738218 | Cucumis sativus | Chinese Long | Leaf | 385.12 |
| SAMN00738226 | Cucumis sativus | Chinese Long | Tendril | 111.99 |
| SAMN00738227 | Cucumis sativus | Chinese Long | Base part of tendril | 112.24 |
|
| PRJNA773731: Transcriptomes of apical pistils in wild-type and mutants (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN22504570 | Cucumis sativus | Xintaimici | Apical pistils containing stigmas and styles at anthesis | 91.62 |
| SAMN22504567 | Cucumis sativus | Csalc-/- | Apical pistils containing stigmas and styles at anthesis | 119.08 |
| SAMN22504573 | Cucumis sativus | Csspt-/- | Apical pistils containing stigmas and styles at anthesis | 103.94 |
| SAMN22504565 | Cucumis sativus | CssptCsalc-/- | Apical pistils containing stigmas and styles at anthesis | 101.73 |
|
| PRJNA510369: Transcriptome of lateral bud of CsBRC1 RNAi line (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10602942 | Cucumis sativus | CsBRC1-RNAi | Lateral bud | 312.38 |
| SAMN10602932 | Cucumis sativus | R1461 | Lateral bud | 245.12 |
|
| PRJNA700062: Transcriptomes of Cshec2 CRISPR mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17821603 | Cucumis sativus | Cshec2 CRISPR mutant | Female bud at 7 days before anthesis | 155.91 |
| SAMN17821606 | Cucumis sativus | XTMC | Female bud at 7 days before anthesis | 157.65 |
|
| PRJNA685868: Transcriptomes of albino mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17098952 | Cucumis sativus | albino mutant | Cotyledon of 7-day-old seedling | 202.67 |
| SAMN17098955 | Cucumis sativus | g32 | Cotyledon of 7-day-old seedling | 603.63 |
|
| PRJNA402017: Transcriptome of young fruits of CsFUL1 overexpression line (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN07614792 | Cucumis sativus | R1407 | Young fruits at 4 days before anthesis (long fruit) | 101.19 |
| SAMN07614794 | Cucumis sativus | CsFUL1 overexpression line | Young fruits at 4 days before anthesis (short fruit) | 86.19 |
|
| PRJNA540430: Transcriptome of fruit of sf2 mutant (short-fruit) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11536744 | Cucumis sativus | 406 | Fruit at 0 days after anthesis | 188.75 |
| SAMN11536742 | Cucumis sativus | sf2 mutant | Fruit at 0 days after anthesis | 243.07 |
|
| PRJNA541993: Transcriptome of fruit peel of an irregularly striped rind mutant (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11606053 | Cucumis sativus | CCMC | Fruit peel at 10 days after post pollination | 221.14 |
| SAMN11606056 | Cucumis sativus | ist mutant | Fruit peel at 10 days after post pollination | 69.19 |
|
| PRJNA685586: Leaf transcriptomes of multiple trichome (mt) mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17088088 | Cucumis sativus | CCMC | The first true leaf | 530.98 |
| SAMN17088091 | Cucumis sativus | mt mutant | The first true leaf | 751.78 |
|
| PRJNA342056: Transcriptomes of CsIND-RNAi lines (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN05735036 | Cucumis sativus | CsIND-RNAi | Leaf vein | 395.68 |
| SAMN05735041 | Cucumis sativus | R1461 | Leaf vein | 522.5 |
| SAMN05735039 | Cucumis sativus | CsIND-RNAi | Young fruit at 4 d before anthesis | 230.23 |
| SAMN05735037 | Cucumis sativus | R1461 | Young fruit at 4 d before anthesis | 261.56 |
|
| PRJNA672817: Transcriptome profiling of micro-plant (mp) mutant (strand-specific) | Download | Show/hide expression |
|
| PRJNA428976: Transcriptomes of young ovaries in the round leaf mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08326585 | Cucumis sativus | Round leaf (rl) mutant | Young ovaries at 4 d before anthesis | 169.52 |
| SAMN08326588 | Cucumis sativus | 649 | Young ovaries at 4 d before anthesis | 164.46 |
|
| PRJNA382994: Transcriptome profiling of mosaic (MSC) mitochondrial mutants (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06768506 | Cucumis sativus | B | Shoots (cut off 0.5 cm below the cotyledons) | 749.65 |
| SAMN06768508 | Cucumis sativus | MSC3 | Shoots (cut off 0.5 cm below the cotyledons) | 802.37 |
| SAMN06768510 | Cucumis sativus | MSC12 | Shoots (cut off 0.5 cm below the cotyledons) | 705.85 |
| SAMN06768512 | Cucumis sativus | MSC16 | Shoots (cut off 0.5 cm below the cotyledons) | 661.38 |
|
| PRJNA765045: Transcriptome profiling of reciprocal hybrids (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN21542188 | Cucumis sativus | ST8-4x9930-3 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 238.2 |
| SAMN21542191 | Cucumis sativus | 9930-3xST8-4 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 271.31 |
| SAMN21542194 | Cucumis sativus | ST8-2xGY14-15 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 276.35 |
| SAMN21542197 | Cucumis sativus | GY14-15xST8-2 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 262.7 |
| SAMN21542200 | Cucumis sativus | ST8-4xTMG1-5 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 240.63 |
| SAMN21542203 | Cucumis sativus | TMG1-5xST8-4 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 277.94 |
| SAMN21542206 | Cucumis sativus | ST8-4xGY14-15 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 290.94 |
| SAMN21542209 | Cucumis sativus | GY14-15xST8-4 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 263.7 |
|
| PRJNA428292: Transcriptomes of cucumber ovaries inhibited by dominant fruits (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08286996 | Cucumis sativus var. sativus | Elem female | Ovary at 1 day after pollination in presence of older fruits (f+1) | 147.7 |
| SAMN08286998 | Cucumis sativus var. sativus | Elem female | Ovary at 1 DPA, no pollination (S+1) | 193.53 |
| SAMN08287001 | Cucumis sativus var. sativus | Elem female | Ovary at 1 day after pollination (F+1) | 180.91 |
| SAMN08287004 | Cucumis sativus var. sativus | Elem female | Ovary at anthesis | 170.71 |
|
| PRJNA431715: Transcriptomes of ovaries and pericarps from numerous-spine and few-spine inbred lines (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08398980 | Cucumis sativus | NCG122 | Pericarp on the day of flowering of numerous fruit spine line | 206.72 |
| SAMN08398977 | Cucumis sativus | NCG122 | Ovary at 6 days before flowering of numerous fruit spine line | 175.65 |
| SAMN08398986 | Cucumis sativus | NCG121 | Pericarp on the day of flowering of few fruit spine line | 218.9 |
| SAMN08398983 | Cucumis sativus | NCG121 | Ovary at 6 days before flowering of few fruit spine line | 185.27 |
|
| PRJNA613672: Transcriptome profiling of ovary culture-induced embryogenesis (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14414632 | Cucumis sativus | SG033 | Fresh unpollinated ovaries cultured for 0 d | 63.24 |
| SAMN14414629 | Cucumis sativus | SG033 | Ovules cultured for 2 d | 44.54 |
| SAMN14414626 | Cucumis sativus | SG033 | Embryos cultured for 10 d | 71.68 |
| SAMN14414623 | Cucumis sativus | SG033 | Embryos cultured for 20 d | 77.24 |
| SAMN14414621 | Cucumis sativus | SG033 | Embryos cultured for 30 d | 106.29 |
| SAMN14414646 | Cucumis sativus | SG033 | Shoots after 60 d of culture | 90.52 |
|
| PRJDB6130: Hydrotropism-related gene expression in roots exposed to different gravitational conditions (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMD00089537 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions without hydrostimulation | 61.68 |
| SAMD00089538 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions without hydrostimulation | 63.23 |
| SAMD00089539 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to hydrostimulation | 70.73 |
| SAMD00089540 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to hydrostimulation | 74.92 |
| SAMD00089541 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to H2O saturation | 62.45 |
| SAMD00089542 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to H2O saturation | 60.02 |
| SAMD00089543 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from germinated cucumber seedlings exposed to hydrostimulation under clinostat conditions for 4 h | 63.71 |
| SAMD00089544 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from germinated cucumber seedlings exposed to hydrostimulation under clinostat conditions for 4 h | 67.41 |
| SAMD00089545 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots that bent to the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 59.46 |
| SAMD00089546 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots that bent to the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 55.31 |
| SAMD00089547 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 53.27 |
| SAMD00089548 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 53.23 |
|
| PRJNA271595: Transcriptome profiling of root development (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN03275394 | Cucumis sativus | Gy14 | Root elongation zone | 81.63 |
| SAMN03275412 | Cucumis sativus | Gy14 | Root meristematic zone | 60.75 |
| SAMN03275424 | Cucumis sativus | Gy14 | Root differentiation zone | 63.69 |
|
| PRJNA319011: Transcriptome profiles of seed from fruit at different developmental stages (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04867895 | Cucumis sativus | Marketmore | Seed at 28 days after pollination | 11.87 |
| SAMN04867896 | Cucumis sativus | Marketmore | Seed at 37 days after pollination | 12.4 |
| SAMN04867897 | Cucumis sativus | Marketmore | Seed at 45 days after pollination | 30.91 |
| SAMN04867898 | Cucumis sativus | Marketmore | Seed at 60 days after pollination | 21.46 |
|
| PRJNA359788: Transcriptomes of cucumber lines with different sex types (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06198176 | Cucumis sativus | B10 | Shoot apex from monoecious B10 cucumber line - male | 102.53 |
| SAMN06198221 | Cucumis sativus | 859 | Shoot apex from androecious 859 cucumber line - male | 176.48 |
| SAMN06198177 | Cucumis sativus | Gy3 | Shoot apex from gynoecious Gy3 cucumber line - female | 134.69 |
| SAMN06198244 | Cucumis sativus | 2gg | Shoot apex from gynoecious 2gg cucumber line - female | 121.05 |
| SAMN06198219 | Cucumis sativus | Hgy3 | Shoot apex from hermaphrodite Hgy3 cucumber line - hermaphrodite | 146.45 |
| SAMN06198226 | Cucumis sativus | LH | Shoot apex from andromonoecious LH cucumber line - hermaphrodite | 104.84 |
|
| PRJNA827999: Transcriptome profiling of shoot apex in determinate/indeterminate growth genotypes (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN27628251 | Cucumis sativus | D82 | Shoot apex of the first expanding leaf from the determinate growth genotype | 210.57 |
| SAMN27628254 | Cucumis sativus | CCMC | Shoot apex of the first expanding leaf from the indeterminate growth genotype | 182.85 |
| SAMN27628252 | Cucumis sativus | D82 | Shoot apex of the third expanding leaf from the determinate growth genotype | 191.74 |
| SAMN27628255 | Cucumis sativus | CCMC | Shoot apex of the third expanding leaf from the indeterminate growth genotype | 171.32 |
| SAMN27628253 | Cucumis sativus | D82 | Shoot apex of the sixth expanding leaf from the determinate growth genotype | 194.35 |
| SAMN27628256 | Cucumis sativus | CCMC | Shoot apex of the sixth expanding leaf from the indeterminate growth genotype | 146.52 |
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