| PRJNA376073: Transcriptome responses to GA3 (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SRX2577785 | Cucumis sativus | 13_3B | Shoot apices without GA3 treatment | 807.65 |
| SRX2577783 | Cucumis sativus | 13_3B | Shoot apices treated with GA3 for 6 h | 709.06 |
| SRX2577781 | Cucumis sativus | 13_3B | Shoot apices treated with GA3 for 12 h | 759.29 |
|
| PRJNA613788: Transcriptome response to sugar treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14419958 | Cucumis sativus | ZK | Non-pollinated fruit | 1353.51 |
| SAMN14419952 | Cucumis sativus | ZK | Fruit at one day after anthesis treated with fructose | 1140.55 |
| SAMN14419954 | Cucumis sativus | ZK | Fruit at one day after anthesis treated with glucose | 1412.82 |
| SAMN14419956 | Cucumis sativus | ZK | Fruit at one day after anthesis treated with sucrose | 1164.74 |
|
| PRJNA667293: Transcriptome profiling of lateral root development regulated by GA3 (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN16365205 | Cucumis sativus | Daqingba | Roots of seedlings with mock treatment at 2 days after germination | 1998.15 |
| SAMN16365207 | Cucumis sativus | Daqingba | Roots of seedlings treated with 50 uM GA3 at 2 days after germination | 1860.47 |
| SAMN16365210 | Cucumis sativus | Daqingba | Roots of seedlings with mock treatment at 3 days after germination | 1814.86 |
| SAMN16365213 | Cucumis sativus | Daqingba | Roots of seedlings treated with 50 uM GA3 at 3 days after germination | 1643.4 |
| SAMN16365216 | Cucumis sativus | Daqingba | Roots of seedlings with mock treatment at 5 days after germination | 1614.99 |
| SAMN16365219 | Cucumis sativus | Daqingba | Roots of seedlings treated with 50 uM GA3 at 5 days after germination | 1545.66 |
|
| PRJNA782544: Transcriptome responses to ethrel (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN23383751 | Cucumis sativus | Xinchun No. 4 | Explants treated with 0.5 uM ethrel for 48 hours | 790.42 |
| SAMN23383748 | Cucumis sativus | Xinchun No. 4 | Explants treated with distilled water for 48 hours | 855.1 |
|
| PRJNA316747: Transcriptomes of cucumber roots inoculated by AMF (Rhizophagus irregularis) under low temperature (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04589924 | Cucumis sativus | Zhongnong No. 26 | Root of non-inoculated plant under normal temperature | 715.29 |
| SAMN04589926 | Cucumis sativus | Zhongnong No. 26 | Root of plant inoculated with AMF R. irregularis under normal temperature | 661.18 |
| SAMN04589925 | Cucumis sativus | Zhongnong No. 26 | Root of non-inoculated plant under low temperature | 673.25 |
| SAMN04589927 | Cucumis sativus | Zhongnong No. 26 | Root of plant inoculated with AMF R. irregularis under low temperature | 570.43 |
|
| PRJNA438923: Transcriptome responses to chilling stress (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08731966 | Cucumis sativus | Cu-01 | Leaves of untreated plants | 660.1 |
| SAMN08731973 | Cucumis sativus | Cu-01 | Leaves of plants exposed to an air temperature of 6℃ for 2 h | 667.08 |
| SAMN08731970 | Cucumis sativus | Cu-01 | Leaves of plants exposed to an air temperature of 6℃ for 6 h | 641.06 |
| SAMN08731967 | Cucumis sativus | Cu-01 | Leaves of plants exposed to an air temperature of 6℃ for 12 h | 677.26 |
|
| PRJNA701131: Transcriptome responses of grafted cucumber to cold stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17848873 | Cucumis sativus | Jinyou 35 | Leaves of cucumber grafted on pumpkin under normal temperature (25 ℃) | 655.04 |
| SAMN17848870 | Cucumis sativus | Jinyou 35 | Leaves of homografted cucumber under normal temperature (25 ℃) | 842.46 |
| SAMN17848879 | Cucumis sativus | Jinyou 35 | Leaves of cucumber grafted on pumpkin under cold temperature (5 ℃) | 365.06 |
| SAMN17848876 | Cucumis sativus | Jinyou 35 | Leaves of homografted cucumber under cold temperature (5 ℃) | 308.02 |
|
| PRJNA817708: Transcriptome responses to cold stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN26806305 | Cucumis sativus | CT90 | Leaf of tolerant line at 24h after cold treatment of 6 C | 869.58 |
| SAMN26806311 | Cucumis sativus | CT57 | Leaf of sensitive line at 24h after cold treatment of 6 C | 767.88 |
| SAMN26806308 | Cucumis sativus | CT90 | Root of tolerant line at 24h after cold treatment of 6 C | 1012.85 |
| SAMN26806314 | Cucumis sativus | CT57 | Root of sensitive line at 24h after cold treatment of 6 C | 1058.1 |
|
| PRJNA720243: Transcriptome response of grafted cucumber to drought stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN18643059 | Cucumis sativus | EC1 | Leaf of homografted cucumber plant under control conditions | 695.28 |
| SAMN18643060 | Cucumis sativus | EC1 | Leaf of homografted cucumber plant under drought stress | 770.27 |
| SAMN18643061 | Cucumis sativus | EC1 | Leaf of cucumber plant grafted onto Cucurbits moschata under control conditions | 829.43 |
| SAMN18643062 | Cucumis sativus | EC1 | Leaf of cucumber plant grafted onto Cucurbits moschata under drought stress | 979.96 |
|
| PRJEB7612: Transcriptome response to silicon treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMEA3105050 | Cucumis sativus | B10 | Leaves and stems of untreated plants | 628.65 |
| SAMEA3105054 | Cucumis sativus | B10 | Leaves and stems of plants under silicon treatment | 551.27 |
|
| PRJNA307279: Transcriptome profiles of grafted plants under Pi stress (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04457411 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants (with mature leaves removed) under +Pi for 24 h | 988.59 |
| SAMN04457412 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants (with mature leaves removed) under -Pi for 24 h | 952.48 |
| SAMN04457417 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants under +Pi for 24 h | 896.13 |
| SAMN04457418 | Cucumis sativus | Chinese Long | Developing leaf of homo-grafted cucumber plants under -Pi for 24 h | 921.72 |
| SAMN04457423 | Cucumis sativus | Chinese Long | Developing leaf of non-grafted cucumber plants under +Pi for 24 h | 903.62 |
| SAMN04457424 | Cucumis sativus | Chinese Long | Developing leaf of non-grafted cucumber plants under -Pi for 24 h | 898.1 |
| SAMN04457413 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants (with mature leaves removed) under +Pi for 24 h | 1005.55 |
| SAMN04457414 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants (with mature leaves removed) under -Pi for 24 h | 1015.03 |
| SAMN04457419 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants under +Pi for 24 h | 904 |
| SAMN04457420 | Cucumis sativus | Chinese Long | Shoot apex of homo-grafted cucumber plants under -Pi for 24 h | 933.37 |
| SAMN04457425 | Cucumis sativus | Chinese Long | Shoot apex of non-grafted cucumber plants under +Pi for 24 h | 900.6 |
| SAMN04457426 | Cucumis sativus | Chinese Long | Shoot apex of non-grafted cucumber plants under -Pi for 24 h | 897.41 |
| SAMN04457415 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants (with stock leaves removed) under +Pi for 24 h | 1393.03 |
| SAMN04457416 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants (with stock leaves removed) under -Pi for 24 h | 1395.33 |
| SAMN04457421 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants under +Pi for 24 h | 1375.82 |
| SAMN04457422 | Cucumis sativus | Chinese Long | Root of homo-grafted cucumber plants under -Pi for 24 h | 1369.25 |
| SAMN04457427 | Cucumis sativus | Chinese Long | Root of non-grafted cucumber plants under +Pi for 24 h | 1153.76 |
| SAMN04457428 | Cucumis sativus | Chinese Long | Root of non-grafted cucumber plants under -Pi for 24 h | 1292.87 |
| SAMN04457397 | Cucumis sativus | Chinese long | Lamina under +Pi for 12 h | 307.07 |
| SAMN04457398 | Cucumis sativus | Chinese long | Lamina under -Pi for 12 h | 268.77 |
| SAMN04457399 | Cucumis sativus | Chinese long | Major vein under +Pi for 12 h | 533.53 |
| SAMN04457400 | Cucumis sativus | Chinese long | Major vein under -Pi for 12 h | 575.4 |
| SAMN04457401 | Cucumis sativus | Chinese long | Petiole vascular tissue under +Pi for 12 h | 585.04 |
| SAMN04457402 | Cucumis sativus | Chinese long | Petiole vascular tissue under -Pi for 12 h | 590.57 |
| SAMN04457403 | Cucumis sativus | Chinese long | Phloem sap under +Pi for 12 h | 421.42 |
| SAMN04457404 | Cucumis sativus | Chinese long | Phloem sap under -Pi for 12 h | 593.5 |
| SAMN04457405 | Cucumis sativus | Chinese long | Internode vascular tissue under +Pi for 12 h | 704.54 |
| SAMN04457406 | Cucumis sativus | Chinese long | Internode vascular tissue under -Pi for 12 h | 667.99 |
| SAMN04457407 | Cucumis sativus | Chinese long | Shoot apex under +Pi for 12 h | 1381.98 |
| SAMN04457408 | Cucumis sativus | Chinese long | Shoot apex under -Pi for 12 h | 1257.33 |
| SAMN04457409 | Cucumis sativus | Chinese long | Root under +Pi for 12 h | 746.16 |
| SAMN04457410 | Cucumis sativus | Chinese long | Root under -Pi for 12 h | 693.23 |
|
| PRJNA523714: Transcriptome profiling of C. campestris-connected cucumber plant clusters under nitrogen-depleted condition (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10987397 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-replete condition (both cucumber plants supplied with 10 mM KNO3) after 0 hour | 324.99 |
| SAMN10987421 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 2 hours | 411.78 |
| SAMN10987445 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 8 hours | 482.01 |
| SAMN10987469 | Cucumis sativus | Summer Strong | Leaves of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 48 hours | 334.16 |
| SAMN10987406 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 2 hours | 348.95 |
| SAMN10987430 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 8 hours | 470.59 |
| SAMN10987454 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 48 hours | 343.66 |
| SAMN10987415 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 2 hours | 370.87 |
| SAMN10987439 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 8 hours | 722.99 |
| SAMN10987463 | Cucumis sativus | Summer Strong | Leaves of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 48 hours | 517.27 |
| SAMN10987400 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-replete condition (both cucumber plants supplied with 10 mM KNO3) after 0 hour | 890.87 |
| SAMN10987424 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 2 hours | 1025.06 |
| SAMN10987448 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 8 hours | 768.02 |
| SAMN10987472 | Cucumis sativus | Summer Strong | Roots of plants under homogeneous N-deprived environment (both cucumber plants supplied with 10 mM KCl) after 48 hours | 772.31 |
| SAMN10987409 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 2 hours | 940.76 |
| SAMN10987433 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 8 hours | 976.53 |
| SAMN10987457 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KCl, but the other plant with 10 mM KNO3) for 48 hours | 935.21 |
| SAMN10987418 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 2 hours | 782.26 |
| SAMN10987442 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 8 hours | 958.73 |
| SAMN10987466 | Cucumis sativus | Summer Strong | Roots of plants under heterogeneous N condition (supplied with 10 mM KNO3, but the other plant with 10 mM KCl) for 48 hours | 963.79 |
|
| PRJNA765376: Transcriptome responses to Sulfur (S) fumigation (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN21555952 | Cucumis sativus | Chinese Long | Non sulfur-fumigated ovaries at 0 days post pollination | 783.47 |
| SAMN21555953 | Cucumis sativus | Chinese Long | Sulfur-fumigated ovaries at 0 days post pollination | 1028.87 |
| SAMN21555954 | Cucumis sativus | Chinese Long | Non sulfur-fumigated commercial fruits at 12 days post pollination | 681.8 |
| SAMN21555955 | Cucumis sativus | Chinese Long | Sulfur-fumigated commercial fruits at 12 days post pollination | 725.54 |
| SAMN21555950 | Cucumis sativus | Chinese Long | Non sulfur-fumigated mature leaves | 523.1 |
| SAMN21555951 | Cucumis sativus | Chinese Long | Sulfur-fumigated mature leaves | 680.39 |
| SAMN21555948 | Cucumis sativus | Chinese Long | Non sulfur-fumigated young leaves | 524.55 |
| SAMN21555949 | Cucumis sativus | Chinese Long | Sulfur-fumigated young leaves | 618.93 |
|
| PRJNA634519: Transcriptome response to high temperature stress (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14998224 | Cucumis sativus | Chinese Long | Leaves of untreated plants | 923.99 |
| SAMN14998221 | Cucumis sativus | Chinese Long | Leaves of plants under heat treatment at 42℃ for 3 hours | 452.31 |
| SAMN14998218 | Cucumis sativus | Chinese Long | Leaves of plants under heat treatment at 42℃ for 6 hours | 436.08 |
|
| PRJNA748460: Transcriptome profiling of male flower development under heat stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN20335859 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 0-3 mm under normal conditions | 445.39 |
| SAMN20335871 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 0-3 mm under heat stress | 607.43 |
| SAMN20335862 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 3-6 mm under normal conditions | 394.47 |
| SAMN20335874 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 3-6 mm under heat stress | 533.43 |
| SAMN20335865 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 6-9 mm under normal conditions | 271.41 |
| SAMN20335877 | Cucumis sativus | B80 | Anthers of male flowers with lengths of 6-9 mm under heat stress | 458.39 |
| SAMN20335868 | Cucumis sativus | B80 | Anthers of male flowers with lengths of >9 mm under normal conditions | 122.5 |
| SAMN20335880 | Cucumis sativus | B80 | Anthers of male flowers with lengths of >9 mm under heat stress | 212.25 |
|
| PRJNA380322: Transcriptome responses to temperature and photoperiod (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06640661 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under low temperature, short day | 1205.89 |
| SAMN06640663 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under high temperature, short day | 920.92 |
| SAMN06640662 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under low temperature, long day | 1199.13 |
| SAMN06640664 | Cucumis sativus | Chinese Long | Shoot apices from seedlings under high temperature, long day | 1063.11 |
|
| PRJNA475903: Transcriptome responses to photoperiod treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09405568 | Cucumis sativus | SWCC8 | Leaves of plant at 0 day of photoperiod treatment | 587.58 |
| SAMN09405577 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 7, 14 and 21 days of equal-day treatment | 781.66 |
| SAMN09405571 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 7, 14 and 21 days of short-day treatment | 775.84 |
| SAMN09405580 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 37 and 44 days of equal-day treatment | 743.42 |
| SAMN09405574 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 37 and 44 days of short-day treatment | 886.84 |
| SAMN09405583 | Cucumis sativus | SWCC8 | Leaves (mixed) of plants at 52 and 59 days of equal-day treatment | 577.42 |
|
| PRJNA476021: Transcriptome responses to different ratios of blue and red light (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09425165 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 5 days | 1604.22 |
| SAMN09425169 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 10 days | 1203.9 |
| SAMN09425173 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 2:1 for 15 days | 1314.7 |
| SAMN09425167 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 5 days | 1391.64 |
| SAMN09425171 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 10 days | 1112.53 |
| SAMN09425175 | Cucumis sativus | Huaqing No. 5 | Shoot tips of plants under treatment with ratio of red to blue light of 4:1 for 15 days | 969.58 |
|
| PRJNA782229: Transcriptome profiling of fruit development under different photoperiod treatment (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SRX13518806 | Cucumis sativus | CC3 | Fruits at 10 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 619.89 |
| SRX13518810 | Cucumis sativus | CC3 | Fruits at 10 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 793.11 |
| SRX13518829 | Cucumis sativus | CC3 | Fruits at 20 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 731.22 |
| SRX13518813 | Cucumis sativus | CC3 | Fruits at 20 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 718.67 |
| SRX13518850 | Cucumis sativus | CC3 | Fruits at 30 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 496.96 |
| SRX13518816 | Cucumis sativus | CC3 | Fruits at 30 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 730.55 |
| SRX13518808 | Cucumis sativus | CC3 | Fruits at 40 days after pollination from photoperiod-insensitive plants subjected to neutral day treatment (12L/12D) | 477.94 |
| SRX13518820 | Cucumis sativus | CC3 | Fruits at 40 days after pollination from photoperiod-insensitive plants subjected to short day treatment (8L/16D) | 674.87 |
| SRX13518823 | Cucumis sativus | SWCC8 | Fruits at 10 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 444.14 |
| SRX13518836 | Cucumis sativus | SWCC8 | Fruits at 10 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 1107.57 |
| SRX13518826 | Cucumis sativus | SWCC8 | Fruits at 20 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 655.26 |
| SRX13518839 | Cucumis sativus | SWCC8 | Fruits at 20 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 656.47 |
| SRX13518830 | Cucumis sativus | SWCC8 | Fruits at 30 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 398.77 |
| SRX13518843 | Cucumis sativus | SWCC8 | Fruits at 30 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 538.49 |
| SRX13518833 | Cucumis sativus | SWCC8 | Fruits at 40 days after pollination from photoperiod-sensitive plants subjected to neutral day treatment (12L/12D) | 339.42 |
| SRX13518846 | Cucumis sativus | SWCC8 | Fruits at 40 days after pollination from photoperiod-sensitive plants subjected to short day treatment (8L/16D) | 348.51 |
|
| PRJNA437579: Root transcriptome responses to salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08668092 | Cucumis sativus | Jinchun No. 2 | Fresh root apexes (0-2 mm from the root tip) from seedlings without NaCl treatment | 1299.45 |
| SAMN08668098 | Cucumis sativus | Jinchun No. 2 | Fresh root apexes (0-2 mm from the root tip) from seedlings after 24 hours treatment with 75 mM NaCl | 440.03 |
|
| PRJNA477930: Transcriptome responses to salt stress and silicon treatment (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09487602 | Cucumis sativus | JinYou 1 | Leaves of untreated plants | 560.22 |
| SAMN09487597 | Cucumis sativus | JinYou 1 | Leaves of plants treated with silicon for three days | 668.04 |
| SAMN09487599 | Cucumis sativus | JinYou 1 | Leaves of plants treated with salt for three days | 722.22 |
| SAMN09487594 | Cucumis sativus | JinYou 1 | Leaves of plants treated with salt and silicon for three days | 732.32 |
|
| PRJNA511946: Transcriptome response to salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10653474 | Cucumis sativus | JinYou 1 | Roots of non-stressed plants | 1099.35 |
| SAMN10653467 | Cucumis sativus | JinYou 1 | Roots of plants under salt stress for 3 days | 1183.22 |
|
| PRJNA524275: Transcriptome profiling of C. campestris-connected cucumber plant clusters under salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11020240 | Cucumis sativus | Jinyou 35 | Leaves, both cucumber plants were mock treated for 12/24 h | 468.15 |
| SAMN11020243 | Cucumis sativus | Jinyou 35 | Leaves of plant treated with 50 mM NaCl for 12 h, while the other was mock treated | 245.55 |
| SAMN11020246 | Cucumis sativus | Jinyou 35 | Leaves of mock treated plant, while the other was treated with 50 mM NaCl for 12 h | 363.97 |
| SAMN11020249 | Cucumis sativus | Jinyou 35 | Leaves, both cucumber plants treated with 50 mM NaCl for 12 h | 253.67 |
| SAMN11020252 | Cucumis sativus | Jinyou 35 | Leaves of plant treated with 50 mM NaCl for 24 h, while the other was mock treated | 240.72 |
| SAMN11020255 | Cucumis sativus | Jinyou 35 | Leaves of mock treated plant, while the other was treated with 50 mM NaCl for 24 h | 276.75 |
| SAMN11020258 | Cucumis sativus | Jinyou 35 | Leaves, both cucumber plants treated with 50 mM NaCl for 24 h | 258.72 |
| SAMN11020261 | Cucumis sativus | Jinyou 35 | Roots, both cucumber plants were mock treated for 12/24 h | 967.33 |
| SAMN11020264 | Cucumis sativus | Jinyou 35 | Roots of plant treated with 50 mM NaCl for 12 h, while the other was mock treated | 834.8 |
| SAMN11020267 | Cucumis sativus | Jinyou 35 | Roots of mock treated plant, while the other was treated with 50 mM NaCl for 12 h | 823.11 |
| SAMN11020270 | Cucumis sativus | Jinyou 35 | Roots, both cucumber plants treated with 50 mM NaCl for 12 h | 943.53 |
| SAMN11020273 | Cucumis sativus | Jinyou 35 | Roots of plant treated with 50 mM NaCl for 24 h, while the other was mock treated | 1013.59 |
| SAMN11020276 | Cucumis sativus | Jinyou 35 | Roots of mock treated plant, while the other was treated with 50 mM NaCl for 24 h | 893.4 |
| SAMN11020279 | Cucumis sativus | Jinyou 35 | Roots, both cucumber plants treated with 50 mM NaCl for 24 h | 959.55 |
|
| PRJNA563457: Transcriptome responses to H2S-regulated salt stress (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12674486 | Cucumis sativus | Chunxiaqiuwang | Leaves of untreated plants | 324.74 |
| SAMN12674489 | Cucumis sativus | Chunxiaqiuwang | Leaves of plants treated with 200 mM NaCl for 7 days | 363.38 |
| SAMN12674492 | Cucumis sativus | Chunxiaqiuwang | Leaves of plants treated with 200 mM NaCl + 15.0 uM NaHS for 7 days | 362.92 |
|
| PRJNA678740: Transcriptome responses to long-term waterlogging (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN16811424 | Cucumis sativus | DH2 | Roots of tolerant plants untreated, cultivated in optimal conditions | 454.51 |
| SAMN16811567 | Cucumis sativus | DH2 | Roots of tolerant plants after 7 days of waterlogging and 14 days of recovery period | 765.15 |
| SAMN16811530 | Cucumis sativus | DH2 | Roots of non-primed tolerant plants, waterlogged for 7 days only once | 463.88 |
| SAMN16811572 | Cucumis sativus | DH2 | Roots of primed tolerant plants; waterlogged twice after 14 days of recovery period | 284.82 |
| SAMN16811671 | Cucumis sativus | DH4 | Roots of sensitive plants untreated, cultivated in optimal conditions | 426.42 |
| SAMN16811697 | Cucumis sativus | DH4 | Roots of sensitive plants after 7 days of waterlogging and 14 days of recovery period | 653.6 |
| SAMN16811676 | Cucumis sativus | DH4 | Roots of non-primed sensitive plants; waterlogged for 7 days only once | 311.35 |
| SAMN16811714 | Cucumis sativus | DH4 | Roots of primed sensitive plants; waterlogged twice after 14 days of recovery period | 240.78 |
|
| PRJNA799460: Transcriptome responses of hypocotyl to different waterlogging stress treatments (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN25172608 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber under control conditions for 48 hours | 495.02 |
| SAMN25172611 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber under waterlogging for 48 hours | 746.3 |
| SAMN25172614 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber treated with 10uM ACC waterlogging for 48 hours | 701.27 |
| SAMN25172617 | Cucumis sativus | Zaoer-N | Hypocotyl of cucumber treated with 10uM AOA waterlogging for 48 hours | 797.55 |
|
| PRJNA844418: Transcriptome responses of different tissues of hypocotyl to waterlogging (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN28817254 | Cucumis sativus | Zaoer-N | Hypocotyl epidermis of cucumber under control conditions for 48 hours | 516.01 |
| SAMN28817245 | Cucumis sativus | Zaoer-N | Hypocotyl epidermis of cucumber under waterlogging stress for 48 hours | 608.71 |
| SAMN28817257 | Cucumis sativus | Zaoer-N | Hypocotyl vascular bundles of cucumber under control conditions for 48 hours | 420.47 |
| SAMN28817248 | Cucumis sativus | Zaoer-N | Hypocotyl vascular bundle of cucumber under waterlogging stress for 48 hours | 662.88 |
| SAMN28817260 | Cucumis sativus | Zaoer-N | Hypocotyl basal tissue of cucumber under control conditions for 48 hours | 727.82 |
| SAMN28817251 | Cucumis sativus | Zaoer-N | Hypocotyl basic tissue of cucumber under waterlogging stress for 48 hours | 569.68 |
|
| PRJNA563186: Transcriptome responses to Alternaria cucumerina (alternaria leaf spot) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12670099 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 2 days post mock treatment | 625.89 |
| SAMN12670096 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 2 days post inoculation with Alternaria cucumerina | 501.71 |
| SAMN12670105 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 6 days post mock treatment | 725.33 |
| SAMN12670102 | Cucumis sativus | Beijing204 | Leaf of susceptible line at 6 days post inoculation with Alternaria cucumerina | 583.84 |
| SAMN12670111 | Cucumis sativus | D1322 | Leaf of resistant line at 2 days post mock treatment | 781.83 |
| SAMN12670108 | Cucumis sativus | D1322 | Leaf of resistant line at 2 days post inoculation with Alternaria cucumerina | 626.44 |
| SAMN12670117 | Cucumis sativus | D1322 | Leaf of resistant line at 6 days post mock treatment | 640.93 |
| SAMN12670114 | Cucumis sativus | D1322 | Leaf of resistant line at 6 days post inoculation with Alternaria cucumerina | 875.7 |
|
| PRJNA388584: Transcriptome responses to downy mildew (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN07179433 | Cucumis sativus | PI 197088 | Leaf of resistant line at 0 h post inoculation with Pseudoperonospora cubensis | 302.34 |
| SAMN07179434 | Cucumis sativus | PI 197088 | Leaf of resistant line at 6 h post inoculation with Pseudoperonospora cubensis | 332.31 |
| SAMN07179435 | Cucumis sativus | PI 197088 | Leaf of resistant line at 24 h post inoculation with Pseudoperonospora cubensis | 471.92 |
|
| PRJNA544259: Transcriptome responses to downy mildew (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11831000 | Cucumis sativus | HS279 | Leaves of plants at three days post mock treatment | 498.05 |
| SAMN11831003 | Cucumis sativus | HS279 | Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) | 346.75 |
| SAMN11831006 | Cucumis sativus | NIL DM4.1.2 | Leaves of plants at three days post mock treatment | 562.44 |
| SAMN11831009 | Cucumis sativus | NIL DM4.1.2 | Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) | 465.76 |
| SAMN11831012 | Cucumis sativus | NIL DM4.1.3 | Leaves of plants at three days post mock treatment | 433.27 |
| SAMN11831015 | Cucumis sativus | NIL DM4.1.3 | Leaves of plants at three days post inoculation with Pseudoperonospora cubensis (downy mildew) | 369.29 |
|
| PRJNA776553: Garlic volatile diallyl disulfide (DADS) induced cucumber resistance to downy mildew (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN22799462 | Cucumis sativus | CCMC | Leaf of plant uninoculated with P. cubensis and not treated with DADS | 375.19 |
| SAMN22799464 | Cucumis sativus | CCMC | Leaf of plant uninoculated with P. cubensis and treated with DADS | 420.39 |
| SAMN22799450 | Cucumis sativus | CCMC | Leaf of plant at 4 h post inoculation of P. cubensis and not treated with DADS | 898.16 |
| SAMN22799452 | Cucumis sativus | CCMC | Leaf of plant at 4 h post inoculation of P. cubensis and treated with DADS | 837.66 |
| SAMN22799454 | Cucumis sativus | CCMC | Leaf of plant at 24 h post inoculation of P. cubensis and not treated with DADS | 681.02 |
| SAMN22799456 | Cucumis sativus | CCMC | Leaf of plant at 24 h post inoculation of P. cubensis and treated with DADS | 796.7 |
| SAMN22799458 | Cucumis sativus | CCMC | Leaf of plant at 48 h post inoculation of P. cubensis and not treated with DADS | 551.36 |
| SAMN22799460 | Cucumis sativus | CCMC | Leaf of plant at 48 h post inoculation of P. cubensis and treated with DADS | 846 |
|
| PRJNA472169: Transcriptome responses to Fusarium oxysporum (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09228081 | Cucumis sativus | Rijiecheng | Roots of plants at 0 h post inoculation with Foc | 743.22 |
| SAMN09228082 | Cucumis sativus | Rijiecheng | Roots of plants at 24 h post inoculation with Foc | 643.22 |
| SAMN09228083 | Cucumis sativus | Rijiecheng | Roots of plants at 48 h post inoculation with Foc | 754.1 |
| SAMN09228084 | Cucumis sativus | Rijiecheng | Roots of plants at 96 h post inoculation with Foc | 1016.42 |
| SAMN09228085 | Cucumis sativus | Rijiecheng | Roots of plants at 192 h post inoculation with Foc | 732.03 |
|
| PRJNA484083: Transcriptome profiling of cucumber Fusarium wilt resistance induced by intercropping with celery (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN09759444 | Cucumis sativus | Fuyang | Roots of monocultured resistant plants inoculated with Fusarium oxysporum | 530.71 |
| SAMN09759446 | Cucumis sativus | Fuyang | Roots of resistant plants intercropped with celery and inoculated with Fusarium oxysporum | 727.71 |
| SAMN09759443 | Cucumis sativus | Tangyan | Roots of monocultured susceptible plants inoculated with Fusarium oxysporum | 518.49 |
| SAMN09759445 | Cucumis sativus | Tangyan | Roots of susceptible plants intercropped with celery and inoculated with Fusarium oxysporum | 627.12 |
|
| PRJNA750577: Transcriptome responses of CsRbohB-RNAi lines to Fusarium oxysporum (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN20474027 | Cucumis sativus | CCMC | Roots of control plants at 48 hours | 1076.31 |
| SAMN20474030 | Cucumis sativus | CCMC | Roots of plants at 48 hours post inoculation with Foc | 887.88 |
| SAMN20474033 | Cucumis sativus | CsRbohB-RNAi | Roots of control RNAi plants at 48 hours | 1113.42 |
| SAMN20474036 | Cucumis sativus | CsRbohB-RNAi | Roots of RNAi plants at 48 hours post inoculation with Foc | 879.77 |
|
| PRJNA419665: Transcriptome responses to nematode infection (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08095139 | Cucumis sativus | CC3 | Roots of susceptible lines at 0 day post inoculation with Meloidogyne incognita | 1091.37 |
| SAMN08095141 | Cucumis sativus | CC3 | Roots of susceptible lines at 1 day post inoculation with Meloidogyne incognita | 719.85 |
| SAMN08095143 | Cucumis sativus | CC3 | Roots of susceptible lines at 2 days post inoculation with Meloidogyne incognita | 876.13 |
| SAMN08095152 | Cucumis sativus | CC3 | Roots of susceptible lines at 3 days post inoculation with Meloidogyne incognita | 817.32 |
| SAMN08095163 | Cucumis sativus | IL10-1 | Roots of resistant lines at 0 day post inoculation with Meloidogyne incognita | 808.5 |
| SAMN08095169 | Cucumis sativus | IL10-1 | Roots of resistant lines at 1 day post inoculation with Meloidogyne incognita | 962.08 |
| SAMN08095179 | Cucumis sativus | IL10-1 | Roots of resistant lines at 2 days post inoculation with Meloidogyne incognita | 896.61 |
| SAMN08095185 | Cucumis sativus | IL10-1 | Roots of resistant lines at 3 days post inoculation with Meloidogyne incognita | 754.84 |
|
| PRJNA445328: Transcriptome responses to biocontrol agent Trichoderma longibrachiatum (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08779020 | Cucumis sativus | Chinese Long | Leaves from non-inoculated (with Trichoderma) and non-challenged (with B. cinerea) plants | 555.03 |
| SAMN08779324 | Cucumis sativus | Chinese Long | Leaves from inoculated (with Trichoderma) and non-challenged (with B. cinerea) plants | 460.44 |
| SAMN08394921 | Cucumis sativus | Chinese Long | Leaves from inoculated (with Trichoderma) and challenged (with B. cinerea) plants | 402.11 |
|
| PRJNA285071: Transcriptome responses to Pseudoperonospora cubensis (downy mildew) (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN03737503 | Cucumis sativus | Vlaspik | Leaf of susceptible line under mock treatment | 815.71 |
| SAMN03734820 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 1 day post inoculation with Pseudoperonospora cubensis | 716.5 |
| SAMN03737532 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 2 days post inoculation with Pseudoperonospora cubensis | 776.22 |
| SAMN03737500 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 3 days post inoculation with Pseudoperonospora cubensis | 546.71 |
| SAMN03737501 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 4 days post inoculation with Pseudoperonospora cubensis | 418.42 |
| SAMN03737502 | Cucumis sativus | Vlaspik | Leaf of susceptible line at 6 days post inoculation with Pseudoperonospora cubensis | 332.51 |
| SAMN03737504 | Cucumis sativus | PI 197088 | Leaf of resistant line under mock treatment | 597.74 |
| SAMN03737508 | Cucumis sativus | PI 197088 | Leaf of resistant line at 1 day post inoculation with Pseudoperonospora cubensis | 775.38 |
| SAMN03737509 | Cucumis sativus | PI 197088 | Leaf of resistant line at 2 days post inoculation with Pseudoperonospora cubensis | 548.37 |
| SAMN03737510 | Cucumis sativus | PI 197088 | Leaf of resistant line at 3 days post inoculation with Pseudoperonospora cubensis | 447.39 |
| SAMN03737511 | Cucumis sativus | PI 197088 | Leaf of resistant line at 4 days post inoculation with Pseudoperonospora cubensis | 397.41 |
| SAMN03737512 | Cucumis sativus | PI 197088 | Leaf of resistant line at 6 days post inoculation with Pseudoperonospora cubensis | 357.44 |
|
| PRJNA292785: Transcriptome response by physcion and chrysophanol against cucumber powdery mildew (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN03988531 | Cucumis sativus | Changchunmici | Leaves of plants mock treated before inoculation with Sphaerotheca fuliginea for 3 days | 434.83 |
| SAMN03988533 | Cucumis sativus | Changchunmici | Leaves of plants treated with chrysophano before inoculation with Sphaerotheca fuliginea for 3 days | 594.24 |
| SAMN03988535 | Cucumis sativus | Changchunmici | Leaves of plants treated with physcion before inoculation with Sphaerotheca fuliginea for 3 days | 544.91 |
| SAMN03988538 | Cucumis sativus | Changchunmici | Leaves of plants treated with physcion and chrysophano before inoculation with Sphaerotheca fuliginea for 3 days | 619.09 |
|
| PRJNA321023: Transcriptome responses to powdery mildew disease (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04962346 | Cucumis sativus | D8 | Leaves of susceptible plants at 0 h post inoculation with powdery mildew fungus | 791.83 |
| SAMN04962349 | Cucumis sativus | D8 | Leaves of susceptible plants at 48 h post inoculation with powdery mildew fungus | 815.41 |
| SAMN04962345 | Cucumis sativus | SSL508-28 | Leaves of resistant plants at 0 h post inoculation with powdery mildew fungus | 661.18 |
| SAMN04962354 | Cucumis sativus | SSL508-28 | Leaves of resistant plants at 48 h post inoculation with powdery mildew fungus | 860.68 |
|
| PRJNA603869: Transcriptome responses to powdery mildew disease (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN13943385 | Cucumis sativus | Q10 | Leaf of susceptible line at 24 h post mock treatment | 579.51 |
| SAMN13943392 | Cucumis sativus | Q10 | Leaf of susceptible line at 24 h post inoculation with powdery mildew fungus | 426.82 |
| SAMN13943388 | Cucumis sativus | Q10 | Leaf of susceptible line at 48 h post mock treatment | 336.89 |
| SAMN13943395 | Cucumis sativus | Q10 | Leaf of susceptible line at 48 h post inoculation with powdery mildew fungus | 443.35 |
| SAMN13943398 | Cucumis sativus | XY09-118 | Leaf of resistant line at 24 h post mock treatment | 533.95 |
| SAMN13943405 | Cucumis sativus | XY09-118 | Leaf of resistant line at 24 h post inoculation with powdery mildew fungus | 441.79 |
| SAMN13943402 | Cucumis sativus | XY09-118 | Leaf of resistant line at 48 h post mock treatment | 488.15 |
| SAMN13943408 | Cucumis sativus | XY09-118 | Leaf of resistant line at 48 h post inoculation with powdery mildew fungus | 398.97 |
|
| PRJNA816625: Transcriptome response to Podosphaera xanthii (powdery mildew) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN26686559 | Cucumis sativus | B21-a-2-2-2 | Cotyledon of susceptible line at 0 h post inoculation with Podosphaera xanthii | 370.71 |
| SAMN26686562 | Cucumis sativus | B21-a-2-1-2 | Cotyledon of resistant line at 0 h post inoculation with Podosphaera xanthii | 483.43 |
| SAMN26686565 | Cucumis sativus | B21-a-2-2-2 | Cotyledon of susceptible line at 6 h post inoculation with Podosphaera xanthii | 310.02 |
| SAMN26686568 | Cucumis sativus | B21-a-2-1-2 | Cotyledon of resistant line at 6 h post inoculation with Podosphaera xanthii | 459.84 |
|
| PRJNA704621: Transcriptome responses to Pseudomonas syringae pv. lachrymans (Psl) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN18049944 | Cucumis sativus | B10 | Leaf of susceptible line without Psl 814/98 inoculation | 395.57 |
| SAMN18050103 | Cucumis sativus | B10 | Leaf of susceptible line at 1 day post inoculation with Psl 814/98 | 570.14 |
| SAMN18050492 | Cucumis sativus | B10 | Leaf of susceptible line at 3 days post inoculation with Psl 814/98 | 655.47 |
| SAMN18050892 | Cucumis sativus | Gy14 | Leaf of resistant line without Psl 814/98 inoculation | 322.18 |
| SAMN18051058 | Cucumis sativus | Gy14 | Leaf of resistant line at 1 day post inoculation with Psl 814/98 | 580.31 |
| SAMN18051198 | Cucumis sativus | Gy14 | Leaf of resistant line at 3 days post inoculation with Psl 814/98 | 579.22 |
|
| PRJNA345040: Transcriptomes of peels from fruit differing in age-related resistance to Phytophthora capsici (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN05856085 | Cucumis sativus | Vlaspik | Fruit peel collected at 8 days post pollination (susceptible age) | 556.85 |
| SAMN05856088 | Cucumis sativus | Vlaspik | Fruit peel collected at 16 days post pollination (resistant age) | 801.1 |
| SAMN05856091 | Cucumis sativus | Gy14 | Fruit peel collected at 8 days post pollination (susceptible age) | 596.35 |
| SAMN05856094 | Cucumis sativus | Gy14 | Fruit peel collected at 16 days post pollination (susceptible age) | 991.69 |
|
| PRJNA575868: Transcriptomes of fruit peel in response to Phytophthora capsici (fruit rot) (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12912830 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 0 h (Experiment 1) | 611.01 |
| SAMN12912831 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 1) | 643.33 |
| SAMN12912832 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 1) | 994.85 |
| SAMN12912833 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 48 h (Experiment 1) | 595.04 |
| SAMN12912838 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 0 h (Experiment 2) | 350.45 |
| SAMN12912839 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 2 h (Experiment 2) | 413.73 |
| SAMN12912852 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 2 h (Experiment 2) | 374.04 |
| SAMN12912840 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 4 h (Experiment 2) | 398.25 |
| SAMN12912853 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 2) | 402.19 |
| SAMN12912841 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 8 h (Experiment 2) | 321.78 |
| SAMN12912854 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 8 h (Experiment 2) | 490.76 |
| SAMN12912842 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 12 h (Experiment 2) | 341.61 |
| SAMN12912855 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 12 h (Experiment 2) | 556.63 |
| SAMN12912843 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 18 h (Experiment 2) | 313.67 |
| SAMN12912856 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 18 h (Experiment 2) | 579.66 |
| SAMN12912844 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then under mock treatment for 24 h (Experiment 2) | 362.02 |
| SAMN12912857 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 8 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 2) | 611.83 |
| SAMN12912834 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 0 h (Experiment 1) | 843.98 |
| SAMN12912835 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 1) | 916.41 |
| SAMN12912836 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 1) | 810.61 |
| SAMN12912837 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 48 h (Experiment 1) | 738.99 |
| SAMN12912845 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 0 h (Experiment 2) | 431.39 |
| SAMN12912846 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 2 h (Experiment 2) | 528.85 |
| SAMN12912858 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 2 h (Experiment 2) | 500.81 |
| SAMN12912847 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 4 h (Experiment 2) | 547.33 |
| SAMN12912859 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 4 h (Experiment 2) | 575.44 |
| SAMN12912848 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 8 h (Experiment 2) | 522.45 |
| SAMN12912860 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 8 h (Experiment 2) | 715.23 |
| SAMN12912849 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 12 h (Experiment 2) | 543.93 |
| SAMN12912861 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 12 h (Experiment 2) | 831.41 |
| SAMN12912850 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 18 h (Experiment 2) | 529.15 |
| SAMN12912862 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 18 h (Experiment 2) | 744.34 |
| SAMN12912851 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then under mock treatment for 24 h (Experiment 2) | 565.6 |
| SAMN12912863 | Cucumis sativus | Poinsett 76 | Fruit peel collected at 16 days post pollination and then inoculated with Phytophthora capsici for 24 h (Experiment 2) | 618.81 |
|
| PRJNA646644: Transcriptome responses to cucumber green mottle mosaic virus (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN15548822 | Cucumis sativus | 229 | Leaf of healthy control, 3 days | 366.42 |
| SAMN15548823 | Cucumis sativus | 229 | Leaf of plant at 3 days post inoculation with cucumber green mottle mosaic virus | 849.8 |
| SAMN15548824 | Cucumis sativus | 229 | Leaf of healthy control, 20 days | 351.17 |
| SAMN15548825 | Cucumis sativus | 229 | Leaf of plant at 20 days post inoculation with cucumber green mottle mosaic virus | 704.46 |
|
| PRJNA701150: Transcriptome responses to cucumber green mottle mosaic virus (CGMMV) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17849263 | Cucumis sativus | KS | Leaves of healthy plants | 1434.89 |
| SAMN17849283 | Cucumis sativus | KS | Bright yellow islands from CGMMV-infected leaves exhibiting early post-recovery stage symptoms | 1003.04 |
| SAMN17849285 | Cucumis sativus | KS | Dark green islands from CGMMV-infected leaves exhibiting early post-recovery stage symptoms | 1190.71 |
| SAMN17849284 | Cucumis sativus | KS | Bright yellow islands from CGMMV-infected leaves exhibiting late post-recovery stage symptoms | 984.41 |
| SAMN17849286 | Cucumis sativus | KS | Dark green islands from CGMMV-infected leaves exhibiting late post-recovery stage symptoms | 853.66 |
|
| PRJNA837466: Transcriptome response to Prunus necrotic ringspot virus (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN28204068 | Cucumis sativus | NA | Leaf of cucumber seedlings at 12 days of mock treatment | 490.32 |
| SAMN28204071 | Cucumis sativus | NA | Leaf of cucumber seedlings at 12 days post-inoculation with Prunus necrotic ringspot virus | 592.84 |
|
| PRJNA307098: Transcriptome profiling of corolla opening (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04372266 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 1 day after labeling | 1199.47 |
| SAMN04372269 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 3 days after labeling | 738.78 |
| SAMN04372272 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 4 days after labeling | 247.57 |
| SAMN04372275 | Cucumis sativus | 6457 | Corolla opening in the normal ovary at 5 days after labeling | 493.44 |
| SAMN04372278 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 1 day after labeling | 1206.29 |
| SAMN04372281 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 3 days after labeling | 1097.14 |
| SAMN04372284 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 4 days after labeling | 992.68 |
| SAMN04372287 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 5 days after labeling | 854.18 |
| SAMN04372291 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 7 days after labeling | 485.91 |
| SAMN04372294 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 8 days after labeling | 217.67 |
| SAMN04372289 | Cucumis sativus | 6457 | Corolla opening in the super ovary at 9 days after labeling | 394.67 |
|
| PRJNA783663: Time-course transcriptome of multicellular trichomes (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN23441956 | Cucumis sativus | 3542 | Cotyledon at 18 hours after seed soaking | 2159.06 |
| SAMN23441959 | Cucumis sativus | 3542 | Cotyledon at 36 hours after seed soaking | 1623.84 |
| SAMN23441962 | Cucumis sativus | 3542 | Cotyledon at 60 hours after seed soaking | 1479.63 |
| SAMN23441965 | Cucumis sativus | 3542 | Cotyledon at 72 hours after seed soaking | 1197.69 |
| SAMN23441968 | Cucumis sativus | 3542 | Cotyledon at 96 hours after seed soaking | 695.23 |
|
| PRJNA258122: Transcriptomes of early fruits (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN02988317 | Cucumis sativus | 408 | Early fruits of about 2-4cm | 1018.35 |
| SAMN02988319 | Cucumis sativus | 409 | Early fruits of about 2-4cm | 564.88 |
|
| PRJNA381300: Transcriptome profiling of fruits and leaves (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06673860 | Cucumis sativus | Chinese Long | Leaf | 1058.42 |
| SAMN06673861 | Cucumis sativus | Chinese Long | Fruit flesh at 10 days post anthesis | 732.25 |
| SAMN06673862 | Cucumis sativus | Chinese Long | Fruit flesh at 20 days post anthesis | 844.67 |
| SAMN06673863 | Cucumis sativus | Chinese Long | Fruit flesh at 30 days post anthesis | 651.82 |
| SAMN06673864 | Cucumis sativus | Chinese Long | Fruit flesh at 40 days post anthesis | 404.93 |
| SAMN06673866 | Cucumis sativus | Chinese Long | Fruit flesh at 40 days post anthesis, treated with ethylene for 1.5 h | 520.92 |
|
| PRJNA448682: Transcriptome profiling of fruit development (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08862945 | Cucumis sativus | YanBai | Flesh at 3 days after self-pollination | 1163.14 |
| SAMN08862951 | Cucumis sativus | YanBai | Flesh at 6 days after self-pollination | 1360.6 |
| SAMN08862949 | Cucumis sativus | YanBai | Flesh at 9 days after self-pollination | 773.58 |
| SAMN08862946 | Cucumis sativus | YanBai | Peel at 3 days after self-pollination | 1119.67 |
| SAMN08862944 | Cucumis sativus | YanBai | Peel at 6 days after self-pollination | 1028.18 |
| SAMN08862950 | Cucumis sativus | YanBai | Peel at 9 days after self-pollination | 751.46 |
|
| PRJNA517913: Transcriptomes of fruits in lines with different carpel numbers (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10847189 | Cucumis sativus | 32X | Fruits at anthesis (carpel number=3) | 1298.85 |
| SAMN10847186 | Cucumis sativus | GFC | Fruits at anthesis (carpel number=5) | 1416.9 |
|
| PRJNA558838: Transcriptome profiling of fruit development (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12500541 | Cucumis sativus | Gy14 | Fruit peel at 8 days post pollination | 789.93 |
| SAMN12500542 | Cucumis sativus | Gy14 | Fruit peel at 16 days post pollination | 897.92 |
| SAMN12500543 | Cucumis sativus | Poinsett 76 | Fruit peel at 8 days post pollination | 611.01 |
| SAMN12500544 | Cucumis sativus | Poinsett 76 | Fruit peel at 16 days post pollination | 843.98 |
|
| PRJNA564950: Transcriptome profiling of mesocarp development (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12727350 | Cucumis sativus | D8 | Mesocarps at 0 day after pollination | 1086.87 |
| SAMN12727353 | Cucumis sativus | D8 | Mesocarps at 3 days after pollination | 1302.61 |
| SAMN12727356 | Cucumis sativus | D8 | Mesocarps at 6 days after pollination | 1161.5 |
| SAMN12727359 | Cucumis sativus | D8 | Mesocarps at 9 days after pollination | 843.33 |
|
| PRJNA647135: Transcriptomes of fruit skin with different colors (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN15577520 | Cucumis sativus | Bai | Fruit skin at 15 days after flowering | 679.31 |
| SAMN15577524 | Cucumis sativus | Lv | Fruit skin at 15 days after flowering | 732.59 |
|
| PRJNA678478: Transcriptome profiling of fruit peels with different colors (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN16803070 | Cucumis sativus | L14 | Yellow mature peel | 706.49 |
| SAMN16803071 | Cucumis sativus | L14 | Green-white young peel | 474.49 |
| SAMN16803072 | Cucumis sativus | L19 | White mature peel | 619.72 |
| SAMN16803073 | Cucumis sativus | L19 | Green-white young peel | 512.57 |
|
| PRJNA707246: Transcriptome profiling of yellow and white fruit flesh (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN18192479 | Cucumis sativus | NA | Yellow fruit flesh at 10 days after pollination | 644.67 |
| SAMN18192488 | Cucumis sativus | NA | White fruit flesh at 10 days after pollination | 604.21 |
| SAMN18192482 | Cucumis sativus | NA | Yellow fruit flesh at 20 days after pollination | 513.98 |
| SAMN18192491 | Cucumis sativus | NA | White fruit flesh at 20 days after pollination | 553.65 |
| SAMN18192485 | Cucumis sativus | NA | Yellow fruit flesh at 30 days after pollination | 502.68 |
| SAMN18192494 | Cucumis sativus | NA | White fruit flesh at 30 days after pollination | 617.69 |
|
| PRJNA817515: Transcriptomes of fruit flesh and peel (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN26791361 | Cucumis sativus | Chuichung | Peel of ripe fruit | 906.49 |
| SAMN26791363 | Cucumis sativus | White Dadagi | Peel of ripe fruit | 1249.22 |
| SAMN26791365 | Cucumis sativus | Mini | Peel of ripe fruit | 722.6 |
| SAMN26791362 | Cucumis sativus | Chuichung | Flesh of ripe fruit | 491.62 |
| SAMN26791364 | Cucumis sativus | White Dadagi | Flesh of ripe fruit | 699.93 |
| SAMN26791366 | Cucumis sativus | Mini | Flesh of ripe fruit | 652.75 |
|
| PRJNA660492: Transcriptome profiling of fruit spine development (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN15951074 | Cucumis sativus | NC072 | Fruit spines at stage II (0.2 cm ovary) | 978.18 |
| SAMN15951077 | Cucumis sativus | NC072 | Fruit spines at stage III (0.35 cm ovary) | 873.9 |
| SAMN15951080 | Cucumis sativus | NC072 | Fruit spines at stage IV (0.65 cm ovary) | 881.06 |
| SAMN15951083 | Cucumis sativus | NC073 | Fruit spines at stage II (0.2 cm ovary) | 912.38 |
| SAMN15951086 | Cucumis sativus | NC073 | Fruit spines at stage III (0.35 cm ovary) | 853.57 |
| SAMN15951089 | Cucumis sativus | NC073 | Fruit spines at stage IV (0.65 cm ovary) | 894.08 |
|
| PRJNA852610: Transcriptome profiling of fruit spine (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN29336066 | Cucumis sativus | WZ1 | Fruit spine at 8 days before anthesis | 855.61 |
| SAMN29336069 | Cucumis sativus | WZ1 | Fruit spine at anthesis | 841.31 |
| SAMN29336072 | Cucumis sativus | WZ1 | Fruit spine at 8 days after anthesis | 535.97 |
|
| PRJNA552914: Trancriptome profiling of homo- and hetero-grafted plants (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN12221401 | Cucumis sativus | Xintaimici | Leaf of homografting plants (cucumber grafted on cucumber) | 434.28 |
| SAMN12221407 | Cucumis sativus | Xintaimici | Leaf of heterografting plants (cucumber grafted on C. moschata) | 481.51 |
| SAMN12221404 | Cucumis sativus | Xintaimici | Root of homografting plants (cucumber grafted on cucumber) | 699.9 |
| SAMN12221416 | Cucumis sativus | Xintaimici | Root of heterografting plants (C. moschata grafted on cucumber) | 711.58 |
|
| PRJNA317163: Grafting changed silicon metabolism and expression of bloom-forming related genes (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04600319 | Cucumis sativus | Shannong No.5 | Pericarp of non-grafted cucumber (with sparse bloom) | 945.99 |
| SAMN04600321 | Cucumis sativus | Shannong No.5 | Pericarp of non-grafted cucumber treated with 1.7mM silicon for 2 hours (with dense bloom) | 1009.6 |
| SAMN04600323 | Cucumis sativus | Shannong No.5 | Pericarp of self-grafted cucumber (with sparse bloom) | 1074.59 |
| SAMN04600325 | Cucumis sativus | Shannong No.5 | Pericarp of self-grafted cucumber treated with 1.7mM silicon for 2 hours (with dense bloom) | 1041.51 |
| SAMN04600327 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3212' (with sparse bloom) | 1318.73 |
| SAMN04600330 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3212' and treated with 1.7mM silicon for 2 hours (with least bloom) | 952.36 |
| SAMN04600332 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3225' (with sparse bloom) | 1147.64 |
| SAMN04600334 | Cucumis sativus | Shannong No.5 | Pericarp of cucumber grafted onto pumpkin '3225' and treated with 1.7mM silicon for 2 hours (with dense bloom) | 883.67 |
|
| PRJNA612596: Transcriptomes of virescent leaf and green leaf (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14377560 | Cucumis sativus | 104Y | The first true leaf of virescent leaf mutant | 745.02 |
| SAMN14377563 | Cucumis sativus | EC1 | The first true leaf of wild type plant (green leaf) | 694.52 |
|
| PRJNA312872: Transcriptome atlas of cucumber (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04530052 | Cucumis sativus | 9930 | Flesh of unfertilized ovary | 706.14 |
| SAMN04530054 | Cucumis sativus | 9930 | Flesh of 1-week-old fruit | 923.01 |
| SAMN04530056 | Cucumis sativus | 9930 | Flesh of 2-week-old fruit | 843.91 |
| SAMN04530058 | Cucumis sativus | 9930 | Flesh of 3-week-old fruit | 703.9 |
| SAMN04530051 | Cucumis sativus | 9930 | Peel of unfertilized ovary | 504.97 |
| SAMN04530053 | Cucumis sativus | 9930 | Peel of 1-week-old fruit | 721.17 |
| SAMN04530055 | Cucumis sativus | 9930 | Peel of 2-week-old fruit | 1054.62 |
| SAMN04530057 | Cucumis sativus | 9930 | Peel of 3-week-old fruit | 1154.93 |
| SAMN04530050 | Cucumis sativus | 9930 | Unfertilized ovary (not grew) | 1111.07 |
| SAMN04530047 | Cucumis sativus | 9930 | Female flower | 233.01 |
| SAMN04530049 | Cucumis sativus | 9930 | Male flower | 200 |
| SAMN04530048 | Cucumis sativus | 9930 | Male flower bud | 387.17 |
| SAMN04530038 | Cucumis sativus | 9930 | Cotyledon of 4-week-old seedlings | 595.06 |
| SAMN04530037 | Cucumis sativus | 9930 | Hypocotyl of 4-week-old seedlings | 735.37 |
| SAMN04530036 | Cucumis sativus | 9930 | Root of 4-week-old seedlings | 737.41 |
| SAMN04530039 | Cucumis sativus | 9930 | True Leaf of 4-week-old seedlings | 609.06 |
| SAMN04530042 | Cucumis sativus | 9930 | Young Leaf | 517 |
| SAMN04530044 | Cucumis sativus | 9930 | Old leaf | 667.95 |
| SAMN04530043 | Cucumis sativus | 9930 | Petiole of young leaf | 802.49 |
| SAMN04530045 | Cucumis sativus | 9930 | Petiole of old leaf | 870.43 |
| SAMN04530040 | Cucumis sativus | 9930 | Root | 751.27 |
| SAMN04530041 | Cucumis sativus | 9930 | Stem | 755.21 |
| SAMN04530046 | Cucumis sativus | 9930 | Tendril | 434.85 |
|
| PRJNA752681: Transcriptomes of a dark green genotype (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN20604789 | Cucumis sativus | DG | Leaf blade | 494.32 |
| SAMN20604791 | Cucumis sativus | DG | Petiole | 703.41 |
| SAMN20604790 | Cucumis sativus | DG | Stem | 535.97 |
|
| PRJNA80169: Transcriptomes of different cucumber tissues (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN00738224 | Cucumis sativus | Chinese Long | Ovary | 886.47 |
| SAMN00738223 | Cucumis sativus | Chinese Long | Expanded ovary under fertilization (7 days after flowering) | 1005.08 |
| SAMN00738222 | Cucumis sativus | Chinese Long | Expanded ovary not fertilized (7 days after flowering) | 723.49 |
| SAMN00738220 | Cucumis sativus | Chinese Long | Female flower | 638.15 |
| SAMN00738221 | Cucumis sativus | Chinese Long | Male flower | 343.36 |
| SAMN00738225 | Cucumis sativus | Chinese Long | Root | 697.51 |
| SAMN00738219 | Cucumis sativus | Chinese Long | Stem | 1231.65 |
| SAMN00738218 | Cucumis sativus | Chinese Long | Leaf | 1050.63 |
| SAMN00738226 | Cucumis sativus | Chinese Long | Tendril | 1172.53 |
| SAMN00738227 | Cucumis sativus | Chinese Long | Base part of tendril | 1305.13 |
|
| PRJNA773731: Transcriptomes of apical pistils in wild-type and mutants (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN22504570 | Cucumis sativus | Xintaimici | Apical pistils containing stigmas and styles at anthesis | 175.35 |
| SAMN22504567 | Cucumis sativus | Csalc-/- | Apical pistils containing stigmas and styles at anthesis | 264.27 |
| SAMN22504573 | Cucumis sativus | Csspt-/- | Apical pistils containing stigmas and styles at anthesis | 203.95 |
| SAMN22504565 | Cucumis sativus | CssptCsalc-/- | Apical pistils containing stigmas and styles at anthesis | 244.65 |
|
| PRJNA510369: Transcriptome of lateral bud of CsBRC1 RNAi line (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN10602942 | Cucumis sativus | CsBRC1-RNAi | Lateral bud | 1321.6 |
| SAMN10602932 | Cucumis sativus | R1461 | Lateral bud | 753.57 |
|
| PRJNA700062: Transcriptomes of Cshec2 CRISPR mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17821603 | Cucumis sativus | Cshec2 CRISPR mutant | Female bud at 7 days before anthesis | 927.36 |
| SAMN17821606 | Cucumis sativus | XTMC | Female bud at 7 days before anthesis | 953.14 |
|
| PRJNA685868: Transcriptomes of albino mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17098952 | Cucumis sativus | albino mutant | Cotyledon of 7-day-old seedling | 783.77 |
| SAMN17098955 | Cucumis sativus | g32 | Cotyledon of 7-day-old seedling | 776.49 |
|
| PRJNA402017: Transcriptome of young fruits of CsFUL1 overexpression line (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN07614792 | Cucumis sativus | R1407 | Young fruits at 4 days before anthesis (long fruit) | 974.47 |
| SAMN07614794 | Cucumis sativus | CsFUL1 overexpression line | Young fruits at 4 days before anthesis (short fruit) | 131.64 |
|
| PRJNA540430: Transcriptome of fruit of sf2 mutant (short-fruit) (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11536744 | Cucumis sativus | 406 | Fruit at 0 days after anthesis | 1023.25 |
| SAMN11536742 | Cucumis sativus | sf2 mutant | Fruit at 0 days after anthesis | 903.62 |
|
| PRJNA541993: Transcriptome of fruit peel of an irregularly striped rind mutant (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN11606053 | Cucumis sativus | CCMC | Fruit peel at 10 days after post pollination | 845.43 |
| SAMN11606056 | Cucumis sativus | ist mutant | Fruit peel at 10 days after post pollination | 936.41 |
|
| PRJNA685586: Leaf transcriptomes of multiple trichome (mt) mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN17088088 | Cucumis sativus | CCMC | The first true leaf | 922.38 |
| SAMN17088091 | Cucumis sativus | mt mutant | The first true leaf | 739.23 |
|
| PRJNA342056: Transcriptomes of CsIND-RNAi lines (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN05735036 | Cucumis sativus | CsIND-RNAi | Leaf vein | 829.91 |
| SAMN05735041 | Cucumis sativus | R1461 | Leaf vein | 1201.54 |
| SAMN05735039 | Cucumis sativus | CsIND-RNAi | Young fruit at 4 d before anthesis | 1091.89 |
| SAMN05735037 | Cucumis sativus | R1461 | Young fruit at 4 d before anthesis | 1116.43 |
|
| PRJNA672817: Transcriptome profiling of micro-plant (mp) mutant (strand-specific) | Download | Show/hide expression |
|
| PRJNA428976: Transcriptomes of young ovaries in the round leaf mutant (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08326585 | Cucumis sativus | Round leaf (rl) mutant | Young ovaries at 4 d before anthesis | 656.61 |
| SAMN08326588 | Cucumis sativus | 649 | Young ovaries at 4 d before anthesis | 663.42 |
|
| PRJNA382994: Transcriptome profiling of mosaic (MSC) mitochondrial mutants (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06768506 | Cucumis sativus | B | Shoots (cut off 0.5 cm below the cotyledons) | 270.72 |
| SAMN06768508 | Cucumis sativus | MSC3 | Shoots (cut off 0.5 cm below the cotyledons) | 279.76 |
| SAMN06768510 | Cucumis sativus | MSC12 | Shoots (cut off 0.5 cm below the cotyledons) | 365.51 |
| SAMN06768512 | Cucumis sativus | MSC16 | Shoots (cut off 0.5 cm below the cotyledons) | 431.4 |
|
| PRJNA765045: Transcriptome profiling of reciprocal hybrids (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN21542188 | Cucumis sativus | ST8-4x9930-3 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 1488.75 |
| SAMN21542191 | Cucumis sativus | 9930-3xST8-4 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 1449.6 |
| SAMN21542194 | Cucumis sativus | ST8-2xGY14-15 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 1444.25 |
| SAMN21542197 | Cucumis sativus | GY14-15xST8-2 | Apical meristem and young leaf from hybrids with significant reciprocal effects | 1458.88 |
| SAMN21542200 | Cucumis sativus | ST8-4xTMG1-5 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 1517.37 |
| SAMN21542203 | Cucumis sativus | TMG1-5xST8-4 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 1495.2 |
| SAMN21542206 | Cucumis sativus | ST8-4xGY14-15 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 1409.56 |
| SAMN21542209 | Cucumis sativus | GY14-15xST8-4 | Apical meristem and young leaf from hybrids with no significant reciprocal effects | 1472.54 |
|
| PRJNA428292: Transcriptomes of cucumber ovaries inhibited by dominant fruits (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08286996 | Cucumis sativus var. sativus | Elem female | Ovary at 1 day after pollination in presence of older fruits (f+1) | 838.3 |
| SAMN08286998 | Cucumis sativus var. sativus | Elem female | Ovary at 1 DPA, no pollination (S+1) | 706.25 |
| SAMN08287001 | Cucumis sativus var. sativus | Elem female | Ovary at 1 day after pollination (F+1) | 915.53 |
| SAMN08287004 | Cucumis sativus var. sativus | Elem female | Ovary at anthesis | 1040.64 |
|
| PRJNA431715: Transcriptomes of ovaries and pericarps from numerous-spine and few-spine inbred lines (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN08398980 | Cucumis sativus | NCG122 | Pericarp on the day of flowering of numerous fruit spine line | 976.34 |
| SAMN08398977 | Cucumis sativus | NCG122 | Ovary at 6 days before flowering of numerous fruit spine line | 1122.25 |
| SAMN08398986 | Cucumis sativus | NCG121 | Pericarp on the day of flowering of few fruit spine line | 1236.61 |
| SAMN08398983 | Cucumis sativus | NCG121 | Ovary at 6 days before flowering of few fruit spine line | 1279.44 |
|
| PRJNA613672: Transcriptome profiling of ovary culture-induced embryogenesis (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN14414632 | Cucumis sativus | SG033 | Fresh unpollinated ovaries cultured for 0 d | 899.06 |
| SAMN14414629 | Cucumis sativus | SG033 | Ovules cultured for 2 d | 1033.11 |
| SAMN14414626 | Cucumis sativus | SG033 | Embryos cultured for 10 d | 968.51 |
| SAMN14414623 | Cucumis sativus | SG033 | Embryos cultured for 20 d | 821.01 |
| SAMN14414621 | Cucumis sativus | SG033 | Embryos cultured for 30 d | 1278 |
| SAMN14414646 | Cucumis sativus | SG033 | Shoots after 60 d of culture | 1289.77 |
|
| PRJDB6130: Hydrotropism-related gene expression in roots exposed to different gravitational conditions (strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMD00089537 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions without hydrostimulation | 2832.87 |
| SAMD00089538 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions without hydrostimulation | 2829.56 |
| SAMD00089539 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to hydrostimulation | 2777.4 |
| SAMD00089540 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to hydrostimulation | 2728.26 |
| SAMD00089541 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to H2O saturation | 2533.03 |
| SAMD00089542 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from cucumber seedlings germinated under stationary conditions and exposed to H2O saturation | 2470 |
| SAMD00089543 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots from germinated cucumber seedlings exposed to hydrostimulation under clinostat conditions for 4 h | 2660.72 |
| SAMD00089544 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots from germinated cucumber seedlings exposed to hydrostimulation under clinostat conditions for 4 h | 2526.59 |
| SAMD00089545 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots that bent to the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 2730.68 |
| SAMD00089546 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots that bent to the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 2704.48 |
| SAMD00089547 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Wet side of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 2637.58 |
| SAMD00089548 | Cucumis sativus var. sativus | Shinkasyuu-jibai | Dry side of longitudinally halved roots that bent away from the water-absorbent plastic side after germinated cucumber seedlings exposed to H2O saturation under clinostat conditions for 4 h | 2679.64 |
|
| PRJNA271595: Transcriptome profiling of root development (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN03275394 | Cucumis sativus | Gy14 | Root elongation zone | 1710.32 |
| SAMN03275412 | Cucumis sativus | Gy14 | Root meristematic zone | 2925.49 |
| SAMN03275424 | Cucumis sativus | Gy14 | Root differentiation zone | 879.11 |
|
| PRJNA319011: Transcriptome profiles of seed from fruit at different developmental stages (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN04867895 | Cucumis sativus | Marketmore | Seed at 28 days after pollination | 183.74 |
| SAMN04867896 | Cucumis sativus | Marketmore | Seed at 37 days after pollination | 131.55 |
| SAMN04867897 | Cucumis sativus | Marketmore | Seed at 45 days after pollination | 729.08 |
| SAMN04867898 | Cucumis sativus | Marketmore | Seed at 60 days after pollination | 1347.12 |
|
| PRJNA359788: Transcriptomes of cucumber lines with different sex types (non-strand-specific; Publication) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN06198176 | Cucumis sativus | B10 | Shoot apex from monoecious B10 cucumber line - male | 1373.52 |
| SAMN06198221 | Cucumis sativus | 859 | Shoot apex from androecious 859 cucumber line - male | 1140.99 |
| SAMN06198177 | Cucumis sativus | Gy3 | Shoot apex from gynoecious Gy3 cucumber line - female | 1106.17 |
| SAMN06198244 | Cucumis sativus | 2gg | Shoot apex from gynoecious 2gg cucumber line - female | 1001.78 |
| SAMN06198219 | Cucumis sativus | Hgy3 | Shoot apex from hermaphrodite Hgy3 cucumber line - hermaphrodite | 1148.1 |
| SAMN06198226 | Cucumis sativus | LH | Shoot apex from andromonoecious LH cucumber line - hermaphrodite | 767.38 |
|
| PRJNA827999: Transcriptome profiling of shoot apex in determinate/indeterminate growth genotypes (non-strand-specific) | Download | Show/hide expression |
| Sample ID | Species | Genotype | Description | Expression (FPKM) |
| SAMN27628251 | Cucumis sativus | D82 | Shoot apex of the first expanding leaf from the determinate growth genotype | 1337.5 |
| SAMN27628254 | Cucumis sativus | CCMC | Shoot apex of the first expanding leaf from the indeterminate growth genotype | 1681.69 |
| SAMN27628252 | Cucumis sativus | D82 | Shoot apex of the third expanding leaf from the determinate growth genotype | 1097.5 |
| SAMN27628255 | Cucumis sativus | CCMC | Shoot apex of the third expanding leaf from the indeterminate growth genotype | 1318.46 |
| SAMN27628253 | Cucumis sativus | D82 | Shoot apex of the sixth expanding leaf from the determinate growth genotype | 1097.23 |
| SAMN27628256 | Cucumis sativus | CCMC | Shoot apex of the sixth expanding leaf from the indeterminate growth genotype | 1257.51 |
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