| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035107.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-99 | 41.26 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
V + GD L+K+++SLK++MK G +D G LVE L+ G +D + ++ E + +L+QF +VF P TLPP+R +H I L+ GT P+NVRP
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
YRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI VI+EL DEL GA+VFSK+DLK+
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
Query: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
MN + +P LR+FVLVFF DIL+YS+ M++H N++KC FA P + YLGH I
Subjt: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
Query: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
G+ AD KI+A+ +W P N++E+R FLGLTGYY +FV NYG+ AFN LK AM++LP L++P+FN PFEIESDAS VG
Subjt: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
Query: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
+GAVL VA+ L+G+ + + +V+ +YQ+W+AKLLGY + Y+ G EN AAD
Subjt: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
Query: ALSRLPPAL
ALSR+PPA+
Subjt: ALSRLPPAL
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| KAA0055700.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.6e-100 | 41.26 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
V + GD L+K+++SLK++MK G +D G LVE L+ G +D + + E + +L+QF +VF P TLPP+R +H I L+ GT P+NVRP
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
YRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI VI+EL DEL GA+VFSK+DLK+
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
Query: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
MN + +P LR+FVLVFF DIL+YS+ M++H N++KC FA P + YLGH I
Subjt: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
Query: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
G+ AD KI+A+ +W P N++E+R FLGLTGYY +FV NYG+ +AFN LK AM++LP L++P+FN PFEIESDAS VG
Subjt: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
Query: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
+GAVL VA+ L+G+ + + +V+ +YQ+W+AKLLGY + Y+ G EN AAD
Subjt: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
Query: ALSRLPPAL
ALSR PPA+
Subjt: ALSRLPPAL
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| KAA0059567.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-102 | 43.42 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
V + GD L K+++SLK++MK G +D G LVE ++ GL ++ H D ++ EA+ +L+QF VF PT LPP+R DH I L+ G P+
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
Query: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
NVRPYRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI +I+EL DEL GA+VFSKIDLK+
Subjt: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
Query: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
MN + +P LR+FVLVFF DILVYS+ +++H ANL+KC FA P + YLGH
Subjt: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
Query: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
+I G+ AD KI+A+ +W P N++E+R FL LTGYY +FV +YG+ AF+ LK AM++LP L++P+FN PFEIESDA
Subjt: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
Query: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
S G+GA + T++A VL + + G + + +EV +G A +YQRW+AKLLGY + Y+ G EN AADALSR+ P ++
Subjt: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
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| KAA0064684.1 tetratricopeptide repeat protein SKI3 [Cucumis melo var. makuwa] | 1.3e-99 | 43.92 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
+ + GD L K+++SLK+M+K G ED G LVE ++ D + + ++ + VL+QFE VF P LPP+R +H I L+ G PINVRP
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLK-------------
YRY QK+E+ K+V EML +G+I+P+ SPFSS VL KKDGSW FCVDYRA+N ATIPDKFP V++EL DEL GA VFSKIDLK
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLK-------------
Query: ----------------------------SIAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
MN I +P LRKFVLVFF DIL+YS++ DH + AN KKC FA VEYLGH++
Subjt: ----------------------------SIAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
Query: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
GV D KIK++ KW KP NIKE+R FLGLTGYY +FV NYG+ +AF LK AM SLP L+LP+FN+PFEI++DAS G
Subjt: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
Query: IGAVLIHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALEFGLMGVVL
+GAVLI + TL + + ++V +YQ WIAKLLGY + YK G EN AADALS++P +E + V++
Subjt: IGAVLIHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALEFGLMGVVL
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| TYK14806.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-102 | 43.42 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
V + GD L K+++SLK++MK G +D G LVE ++ GL ++ H D ++ EA+ +L+QF VF PT LPP+R DH I L+ G P+
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
Query: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
NVRPYRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI +I+EL DEL GA+VFSKIDLK+
Subjt: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
Query: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
MN + +P LR+FVLVFF DILVYS+ +++H ANL+KC FA P + YLGH
Subjt: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
Query: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
+I G+ AD KI+A+ +W P N++E+R FL LTGYY +FV +YG+ AF+ LK AM++LP L++P+FN PFEIESDA
Subjt: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
Query: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
S G+GA + T++A VL + + G + + +EV +G A +YQRW+AKLLGY + Y+ G EN AADALSR+ P ++
Subjt: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UKN8 Ty3/gypsy retrotransposon protein | 4.7e-100 | 41.26 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
V + GD L+K+++SLK++MK G +D G LVE L+ G +D + + E + +L+QF +VF P TLPP+R +H I L+ GT P+NVRP
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
YRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI VI+EL DEL GA+VFSK+DLK+
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
Query: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
MN + +P LR+FVLVFF DIL+YS+ M++H N++KC FA P + YLGH I
Subjt: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
Query: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
G+ AD KI+A+ +W P N++E+R FLGLTGYY +FV NYG+ +AFN LK AM++LP L++P+FN PFEIESDAS VG
Subjt: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
Query: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
+GAVL VA+ L+G+ + + +V+ +YQ+W+AKLLGY + Y+ G EN AAD
Subjt: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
Query: ALSRLPPAL
ALSR PPA+
Subjt: ALSRLPPAL
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| A0A5A7UY55 Ty3/gypsy retrotransposon protein | 2.2e-102 | 43.42 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
V + GD L K+++SLK++MK G +D G LVE ++ GL ++ H D ++ EA+ +L+QF VF PT LPP+R DH I L+ G P+
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
Query: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
NVRPYRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI +I+EL DEL GA+VFSKIDLK+
Subjt: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
Query: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
MN + +P LR+FVLVFF DILVYS+ +++H ANL+KC FA P + YLGH
Subjt: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
Query: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
+I G+ AD KI+A+ +W P N++E+R FL LTGYY +FV +YG+ AF+ LK AM++LP L++P+FN PFEIESDA
Subjt: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
Query: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
S G+GA + T++A VL + + G + + +EV +G A +YQRW+AKLLGY + Y+ G EN AADALSR+ P ++
Subjt: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
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| A0A5A7VBR1 Tetratricopeptide repeat protein SKI3 | 6.1e-100 | 43.92 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
+ + GD L K+++SLK+M+K G ED G LVE ++ D + + ++ + VL+QFE VF P LPP+R +H I L+ G PINVRP
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLK-------------
YRY QK+E+ K+V EML +G+I+P+ SPFSS VL KKDGSW FCVDYRA+N ATIPDKFP V++EL DEL GA VFSKIDLK
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLK-------------
Query: ----------------------------SIAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
MN I +P LRKFVLVFF DIL+YS++ DH + AN KKC FA VEYLGH++
Subjt: ----------------------------SIAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
Query: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
GV D KIK++ KW KP NIKE+R FLGLTGYY +FV NYG+ +AF LK AM SLP L+LP+FN+PFEI++DAS G
Subjt: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
Query: IGAVLIHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALEFGLMGVVL
+GAVLI + TL + + ++V +YQ WIAKLLGY + YK G EN AADALS++P +E + V++
Subjt: IGAVLIHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALEFGLMGVVL
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| A0A5A7VBU7 Ty3/gypsy retrotransposon protein | 6.1e-100 | 41.26 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
V + GD L+K+++SLK++MK G +D G LVE L+ G +D + + E + +L+QF +VF P TLPP+R +H I L+ GT P+NVRP
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCDQQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPINVRP
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
YRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI VI+EL DEL GA+VFSK+DLK+
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS------------
Query: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
MN + +P LR+FVLVFF DIL+YS+ M++H N++KC FA P + YLGH I
Subjt: -----------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGHLILA
Query: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
G+ AD KI+A+ +W P N++E+R FLGLTGYY +FV NYGS AFN LK AM++LP L++P+FN PFEIESDAS VG
Subjt: GGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVG
Query: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
+GAVL VA+ L+G+ + + +++ +YQ+W+AKLLGY + Y+ G EN AAD
Subjt: IGAVLIHTE--VAF-------------------------------VLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAAD
Query: ALSRLPPAL
ALSR+PPA+
Subjt: ALSRLPPAL
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| A0A5D3CWK0 Ty3/gypsy retrotransposon protein | 2.2e-102 | 43.42 | Show/hide |
Query: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
V + GD L K+++SLK++MK G +D G LVE ++ GL ++ H D ++ EA+ +L+QF VF PT LPP+R DH I L+ G P+
Subjt: VHLHGDHRLVKSQISLKSMMKMLGREDLGMLVELSVLDTGLKDDSKVVLHTCD----QQIPEAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTGPI
Query: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
NVRPYRY QK+E+ ++V+EML++GII+PS+SP+SS VL KKDGSW+FCVDYRALN TIPDKFPI +I+EL DEL GA+VFSKIDLK+
Subjt: NVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS--------
Query: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
MN + +P LR+FVLVFF DILVYS+ +++H ANL+KC FA P + YLGH
Subjt: ---------------------------------IAMNDILRPCLRKFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQFAVPCVEYLGH
Query: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
+I G+ AD KI+A+ +W P N++E+R FL LTGYY +FV +YG+ AF+ LK AM++LP L++P+FN PFEIESDA
Subjt: LILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS---------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDA
Query: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
S G+GA + T++A VL + + G + + +EV +G A +YQRW+AKLLGY + Y+ G EN AADALSR+ P ++
Subjt: SRVGIGAVL-----IHTEVAFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPALE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 8.9e-40 | 29.61 | Show/hide |
Query: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSV-LFGNKKDGS----WQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDL---------
Y YPQ + E+ + +ML GII+ S SP++S + + K+D S ++ +DYR LN T+ D+ PI +DE+L +L F+ IDL
Subjt: YRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSV-LFGNKKDGS----WQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDL---------
Query: --KSIA------------------------------MNDILRPCLRKFVLVFFYDILVYSRSMEDHGNNF--------VANLK----KCQFAVPCVEYLG
+S++ MNDILRP L K LV+ DI+V+S S+++H + ANLK KC+F +LG
Subjt: --KSIA------------------------------MNDILRPCLRKFVLVFFYDILVYSRSMEDHGNNF--------VANLK----KCQFAVPCVEYLG
Query: HLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG-----------------------SEAFNHLKTAMISLPFLSLPNFNEPFEIE
H++ G+ + KI+A+QK+ P KE+++FLGLTGYY KF+ N+ AF LK + P L +P+F + F +
Subjt: HLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG-----------------------SEAFNHLKTAMISLPFLSLPNFNEPFEIE
Query: SDASRVGIGAVLIHTEVAFVLVGQTLR------GTNGSEKSEVFIGIKV-----------IAGEYQ----------------RWIAKLLGYDLSIEYKRG
+DAS V +GAVL + +TL T E + K I+ ++Q RW KL +D I+Y +G
Subjt: SDASRVGIGAVLIHTEVAFVLVGQTLR------GTNGSEKSEVFIGIKV-----------IAGEYQ----------------RWIAKLLGYDLSIEYKRG
Query: SENSAADALSRL
EN ADALSR+
Subjt: SENSAADALSRL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 9.5e-42 | 29.9 | Show/hide |
Query: PINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKD-----GSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDL---
PI + Y Q + E+ V EML G+I+ S SP++S KK ++ +DYR LN TIPD++PI +DE+L +L F+ IDL
Subjt: PINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKD-----GSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKIDL---
Query: --------KSIA------------------------------MNDILRPCLRKFVLVFFYDILVYSRSMEDHGNNFV--------ANLK----KCQFAVP
+SI+ MN+ILRP L K LV+ DI+++S S+ +H N+ ANLK KC+F
Subjt: --------KSIA------------------------------MNDILRPCLRKFVLVFFYDILVYSRSMEDHGNNFV--------ANLK----KCQFAVP
Query: CVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS-----------------------EAFNHLKTAMISLPFLSLPNFN
+LGH++ G+ + K+KA+ + P KE+R+FLGLTGYY KF+ NY EAF LK +I P L LP+F
Subjt: CVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS-----------------------EAFNHLKTAMISLPFLSLPNFN
Query: EPFEIESDASRVGIGAVLIHTEVAFVLVGQTLR----GTNGSEKSEVFI-----------------------------GIKVIAGEYQRWIAKLLGYDLS
+ F + +DAS + +GAVL + +TL + EK + I +K + +RW +L Y
Subjt: EPFEIESDASRVGIGAVLIHTEVAFVLVGQTLR----GTNGSEKSEVFI-----------------------------GIKVIAGEYQRWIAKLLGYDLS
Query: IEYKRGSENSAADALSRL
I+Y +G ENS ADALSR+
Subjt: IEYKRGSENSAADALSRL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.9e-37 | 28.13 | Show/hide |
Query: HVIELEPGTGPINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKI
H IE++PG ++PY + + EI K+V ++L I PS+SP SS V+ KKDG+++ CVDYR LN+ATI D FP+ ID LL + A +F+ +
Subjt: HVIELEPGTGPINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKI
Query: DLKSIAMNDILRPCLR---------------------------------------KFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQF
DL S + P R +FV V+ DIL++S S E+H N + KKC+F
Subjt: DLKSIAMNDILRPCLR---------------------------------------KFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQF
Query: AVPCVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG--------------------SEAFNHLKTAMISLPFLSLPNFN
A E+LG+ I +A K A++ + PK +K+ + FLG+ YY +F+ N +A LK A+ + P L N
Subjt: AVPCVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG--------------------SEAFNHLKTAMISLPFLSLPNFN
Query: EPFEIESDASRVGIGAVLIHTEVAFVLVG---------QTLRGTNGSEKSEVFIGIKVI------------------------------AGEYQRWIAKL
+ + +DAS+ GIGAVL + LVG ++ + + + E+ IK + A QRW+ L
Subjt: EPFEIESDASRVGIGAVLIHTEVAFVLVG---------QTLRGTNGSEKSEVFIGIKVI------------------------------AGEYQRWIAKL
Query: LGYDLSIEYKRGSENSAADALSR
YD ++EY G +N ADA+SR
Subjt: LGYDLSIEYKRGSENSAADALSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.9e-38 | 25.58 | Show/hide |
Query: EAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTG---PINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKK-----DGSWQFCV
E + +L +F ++F P + + ++ E T PI + Y YP + E+ + ++E+L GII+PS SP++S + KK + ++ V
Subjt: EAVRLVLQQFEKVFMTPTTLPPKRHHDHVIELEPGTG---PINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKK-----DGSWQFCV
Query: DYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS-----------------------------------------IAMNDILRPCLRKFVLVFFY
D++ LN TIPD +PI I+ L L A F+ +DL S ++DILR + K V+
Subjt: DYRALNRATIPDKFPISVIDELLDELFGATVFSKIDLKS-----------------------------------------IAMNDILRPCLRKFVLVFFY
Query: DILVYSRSMEDHGN------------NFVANLKKCQFAVPCVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS-----
DI+V+S + H N NL+K F VE+LG+++ A G+ AD K++A+ + P ++KEL+ FLG+T YY KF+ +Y
Subjt: DILVYSRSMEDHGN------------NFVANLKKCQFAVPCVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYGS-----
Query: ----------------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVGIGAVL---------------------------IHTEV
++FN LK+ + S L+ P F +PF + +DAS IGAVL I E+
Subjt: ----------------------------EAFNHLKTAMISLPFLSLPNFNEPFEIESDASRVGIGAVL---------------------------IHTEV
Query: -----------AFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPAL
A++ T++ + +G + + +RW A++ Y+ + YK G N ADALSR+PP L
Subjt: -----------AFVLVGQTLRGTNGSEKSEVFIGIKVIAGEYQRWIAKLLGYDLSIEYKRGSENSAADALSRLPPAL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.9e-37 | 28.13 | Show/hide |
Query: HVIELEPGTGPINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKI
H IE++PG ++PY + + EI K+V ++L I PS+SP SS V+ KKDG+++ CVDYR LN+ATI D FP+ ID LL + A +F+ +
Subjt: HVIELEPGTGPINVRPYRYPQFQKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSWQFCVDYRALNRATIPDKFPISVIDELLDELFGATVFSKI
Query: DLKSIAMNDILRPCLR---------------------------------------KFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQF
DL S + P R +FV V+ DIL++S S E+H N + KKC+F
Subjt: DLKSIAMNDILRPCLR---------------------------------------KFVLVFFYDILVYSRSMEDH------------GNNFVANLKKCQF
Query: AVPCVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG--------------------SEAFNHLKTAMISLPFLSLPNFN
A E+LG+ I +A K A++ + PK +K+ + FLG+ YY +F+ N +A + LK A+ + P L N
Subjt: AVPCVEYLGHLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG--------------------SEAFNHLKTAMISLPFLSLPNFN
Query: EPFEIESDASRVGIGAVLIHTEVAFVLVG---------QTLRGTNGSEKSEVFIGIKVI------------------------------AGEYQRWIAKL
+ + +DAS+ GIGAVL + LVG ++ + + + E+ IK + A QRW+ L
Subjt: EPFEIESDASRVGIGAVLIHTEVAFVLVG---------QTLRGTNGSEKSEVFIGIKVI------------------------------AGEYQRWIAKL
Query: LGYDLSIEYKRGSENSAADALSR
YD ++EY G +N ADA+SR
Subjt: LGYDLSIEYKRGSENSAADALSR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT5G38890.1 Nucleic acid-binding, OB-fold-like protein | 3.7e-57 | 77.14 | Show/hide |
Query: KRSTVEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRAMEIDKVDMHLSFRPGDVVKALVLSLGDARAYHLSTAKN
+R+ VEVTGHKAHG +P GS+VIARVTKVM+KMA+ DI+CVG K+V+E F G+IRQQDVRA EIDKVDMH SF GD+V+A+VLSLGDARAY+LSTAKN
Subjt: KRSTVEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRAMEIDKVDMHLSFRPGDVVKALVLSLGDARAYHLSTAKN
Query: ELGVVSAESTAGAVMVPISWTEMQCPLTGQIQQRKVAKVG
ELGVVSAES AG MVPISWTEMQCPL+GQ +QRKVAKVG
Subjt: ELGVVSAESTAGAVMVPISWTEMQCPLTGQIQQRKVAKVG
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| ATMG00850.1 DNA/RNA polymerases superfamily protein | 3.6e-04 | 51.28 | Show/hide |
Query: QKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSW
++ ++ + EML A IIQPS SP+SS VL KKDG W
Subjt: QKDEIRKMVNEMLTAGIIQPSRSPFSSSVLFGNKKDGSW
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| ATMG00860.1 DNA/RNA polymerases superfamily protein | 5.2e-19 | 44.07 | Show/hide |
Query: NNFVANLKKCQFAVPCVEYLG--HLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG---------------------SEAFNHLK
+ F AN KKC F P + YLG H+I GV+AD +K++AM W +PKN ELR FLGLTGYY +FV NYG + AF LK
Subjt: NNFVANLKKCQFAVPCVEYLG--HLILAGGVAADSSKIKAMQKWLKPKNIKELRSFLGLTGYYPKFVANYG---------------------SEAFNHLK
Query: TAMISLPFLSLPNFNEPF
A+ +LP L+LP+ PF
Subjt: TAMISLPFLSLPNFNEPF
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