CuGenDBv2

Gene ID	Bhi04G001649
Organism	Benincasa hispida cv. B227 (Wax gourd (B227) v1)
Description	Histone H3
Genome location	chr4:55498396..55498806
RNA-Seq Expression	Bhi04G001649
Synteny	Bhi04G001649
Gene Ontology terms	GO:0000786 - nucleosome (cellular component) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

VAH06629.1 unnamed protein product [Triticum turgidum subsp. durum]

1.1e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

VAH21921.1 unnamed protein product [Triticum turgidum subsp. durum]

1.1e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

WP_212576888.1 histone H3, partial [Vibrio parahaemolyticus]

1.1e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_022154562.1 uncharacterized protein LOC111021800 [Momordica charantia]

1.1e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_022635597.1 histone H3-like centromeric protein CSE4 [Vigna radiata var. radiata]

1.1e-63

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3TJX1 Histone H3

5.2e-64

100

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

A0A371GYI7 Histone H3 (Fragment)

5.2e-64

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

A0A6J1JNA9 Histone H3

5.2e-64

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

A0A7I8KTE6 Histone H3

5.2e-64

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

I1HK57 Histone H3

5.2e-64

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

SwissProt top hits

e value

%identity

Alignment

P59226 Histone H3.2

3.1e-66

99.26

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

P68427 Histone H3.2

1.4e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

P68428 Histone H3.2

1.4e-66

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

P68429 Histone H3.2

1.4e-66

100

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

P68430 Histone H3.2

1.4e-66

100

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Arabidopsis top hits

e value

%identity

Alignment

AT1G09200.1 Histone superfamily protein

2.2e-67

99.26

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT3G27360.1 Histone superfamily protein

2.2e-67

99.26

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G10390.1 Histone superfamily protein

2.2e-67

99.26

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G10400.1 Histone superfamily protein

2.2e-67

99.26

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G65360.1 Histone superfamily protein

2.2e-67

99.26

Show/hide

Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCGTACCAAACAAACAGCCCGTAAATCCACTGGCGGCAAGGCTCCCCGGAAGCAATTGGCGACGAAGGCTGCTCGGAAGTCGGCTCCGGCGACCGGAGGCGTAAA
GAAGCCGCACAGATTCAGGCCGGGGACAGTGGCGCTGAGGGAGATTAGAAAGTACCAGAAGAGCACGGAGCTTCTGATCCGAAAGCTTCCGTTCCAGCGGCTAGTTAGAG
AGATCGCTCAGGATTTCAAGACGGATCTTCGGTTCCAGAGCAGCGCTGTTTCGGCGTTGCAGGAGGCGGCGGAGGCGTATCTCGTCGGATTGTTTGAAGATACAAATCTC
TGTGCGATTCATGCTAAGAGAGTTACGATTATGCCCAAAGATATTCAATTGGCCAGGCGGATTAGAGGTGAGAGAGCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL
CAIHAKRVTIMPKDIQLARRIRGERA

Bhi04G001649 (gene) of Wax gourd (B227) v1 genome