; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi05G000923 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi05G000923
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationchr5:38451976..38456313
RNA-Seq ExpressionBhi05G000923
SyntenyBhi05G000923
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]5.1e-9174.9Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME
        MG SHT S +S  PL D RQS MPP++S  DST   S+S SSSIT+DGS  FL SHH LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR HALS +
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME

Query:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP
        QKM  KP M + SSSELM+LQDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEECGSCSDRRH+R+ +NSCGSAR+SQQ  P
Subjt:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP

Query:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQ
        CC +S  IITEVSDQNFVD+ P ELSGG+P AKRLKK SS    N Q
Subjt:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQ

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]8.7e-9173.33Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMP--PSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME
        MG SHT S +S PPL D RQS MP   + +DST   S+S SSSITLDGS  F  SHH  QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR  HALS +
Subjt:  MGHSHTQSSISPPPLPDRRQSLMP--PSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME

Query:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP
        QKM  KP  P+ISSSELM+LQDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEEC SCSDRRH+R  +NSC SAR+SQ   P
Subjt:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP

Query:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS
        CC +S  IITEVSDQNFVD+ P ELS G+PIAKRLKK SSD S + QVVP+KR S
Subjt:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]2.9e-9474.9Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME
        MG SHT S +S  PL D RQS MPP++S  DST   S+S SSSIT+DGS  FL SHH LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR HALS +
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME

Query:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP
        QKM  KP M + SSSELM+LQDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEECGSCSDRRH+R+ +NSCGSAR+SQQ  P
Subjt:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP

Query:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS
        CC +S  IITEVSDQNFVD+ P ELSGG+P AKRLKK SS    N QVVP+KR S
Subjt:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS

XP_038887003.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]3.7e-142100Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQK
        MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQK
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQK

Query:  MHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCC
        MHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCC
Subjt:  MHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCC

Query:  RDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS
        RDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS
Subjt:  RDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS

XP_038887004.1 cold-regulated protein 28 isoform X2 [Benincasa hispida]1.7e-11084.38Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQK
        MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQK
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQK

Query:  MHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCC
        MHWKPFMPNISSSE+          + IGR                           KQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCC
Subjt:  MHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCC

Query:  RDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS
        RDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS
Subjt:  RDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein4.2e-9173.33Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMP--PSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME
        MG SHT S +S PPL D RQS MP   + +DST   S+S SSSITLDGS  F  SHH  QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR  HALS +
Subjt:  MGHSHTQSSISPPPLPDRRQSLMP--PSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME

Query:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP
        QKM  KP  P+ISSSELM+LQDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEEC SCSDRRH+R  +NSC SAR+SQ   P
Subjt:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP

Query:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS
        CC +S  IITEVSDQNFVD+ P ELS G+PIAKRLKK SSD S + QVVP+KR S
Subjt:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X11.4e-9474.9Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME
        MG SHT S +S  PL D RQS MPP++S  DST   S+S SSSIT+DGS  FL SHH LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR HALS +
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME

Query:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP
        QKM  KP M + SSSELM+LQDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEECGSCSDRRH+R+ +NSCGSAR+SQQ  P
Subjt:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP

Query:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS
        CC +S  IITEVSDQNFVD+ P ELSGG+P AKRLKK SS    N QVVP+KR S
Subjt:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS

A0A5D3C4A3 Cold regulated protein 27, putative isoform 22.5e-9174.9Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME
        MG SHT S +S  PL D RQS MPP++S  DST   S+S SSSIT+DGS  FL SHH LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR HALS +
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSME

Query:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP
        QKM  KP M + SSSELM+LQDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEECGSCSDRRH+R+ +NSCGSAR+SQQ  P
Subjt:  QKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPP

Query:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQ
        CC +S  IITEVSDQNFVD+ P ELSGG+P AKRLKK SS    N Q
Subjt:  CCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQ

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X24.7e-9070.7Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSN---PFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSM
        M  +HT SS+SPP     R+S M  SASD TR  S+S SSS T+D S    P + SHH  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS 
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSN---PFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSM

Query:  EQKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIP
        +QKM  KP MPNISSSE M+LQDASWQKAN+GR DP LDKTADSPAILED+WIN FPSAG QCT E  DVLEECGSCSDR H+RN +NS  SARSSQQIP
Subjt:  EQKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIP

Query:  PCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS
        PCCRDS+ I+TEVSDQNFVD HP ELS G PI KRLKK SSDSSGN++V PYKR S
Subjt:  PCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X22.1e-9070.7Show/hide
Query:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSN---PFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSM
        M  +HT SS+SPP     R+S M  SASD TR  S+S SSS T+D S    P + SHH  QLDA QTHWTDEKHRL+LD+LEASFVQ LH++R   A S 
Subjt:  MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSN---PFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSM

Query:  EQKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIP
        +QKM  KP MPNISSSE M+LQDASWQKANIGR DP L KTADSPAILED+WIN FPSAG Q TPE  DVLEECGSCSDR H+RN +NSC SARSSQQIP
Subjt:  EQKMHWKPFMPNISSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIP

Query:  PCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS
        PCCRDS+ I+ EVSDQNFVD HP ELSGG PI KRLKK SSDS GND+V PYKR S
Subjt:  PCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSS

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 272.3e-0929.27Show/hide
Query:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE
        RR S     +SD   S+    +SS+            +S   +  +T WT+EKH LYL S+EASFV  L  +    AL   + +       +    S  +
Subjt:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE

Query:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIII---TE
          +L D  WQK N+ + +  ++     +S   L   WI  +    K   P   +   +  S S+    +    S GSA S +Q+    RD + I     E
Subjt:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIII---TE

Query:  VSDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ
        VSDQNFV++  +  +G    +K++K V  S+SS  DQVVP  +  Q
Subjt:  VSDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ

Q8L983 Cold-regulated protein 288.9e-0626.84Show/hide
Query:  SDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRHALSMEQKMHWKPFMPNISSSELMILQDA
        S S  ++S S+ S +T + S     S    +LD E T WT+EKH  YLD LE+SFV+ L+        R      ++   H        S+ +  +LQ+ 
Subjt:  SDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRHALSMEQKMHWKPFMPNISSSELMILQDA

Query:  SWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPR
         WQK N G+    L+ +++           RF     +  PE                    SN   +  ++ Q    C D     +E S QNF ++   
Subjt:  SWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPR

Query:  ELSGGIPIAKRLKKVSSDSSG--NDQVVPYK
        E  G +   KR ++ ++D S    DQVVP +
Subjt:  ELSGGIPIAKRLKKVSSDSSG--NDQVVPYK

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)6.4e-0726.84Show/hide
Query:  SDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRHALSMEQKMHWKPFMPNISSSELMILQDA
        S S  ++S S+ S +T + S     S    +LD E T WT+EKH  YLD LE+SFV+ L+        R      ++   H        S+ +  +LQ+ 
Subjt:  SDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRHALSMEQKMHWKPFMPNISSSELMILQDA

Query:  SWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPR
         WQK N G+    L+ +++           RF     +  PE                    SN   +  ++ Q    C D     +E S QNF ++   
Subjt:  SWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPR

Query:  ELSGGIPIAKRLKKVSSDSSG--NDQVVPYK
        E  G +   KR ++ ++D S    DQVVP +
Subjt:  ELSGGIPIAKRLKKVSSDSSG--NDQVVPYK

AT4G33980.2 FUNCTIONS IN: molecular_function unknown6.4e-0726.84Show/hide
Query:  SDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRHALSMEQKMHWKPFMPNISSSELMILQDA
        S S  ++S S+ S +T + S     S    +LD E T WT+EKH  YLD LE+SFV+ L+        R      ++   H        S+ +  +LQ+ 
Subjt:  SDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRHALSMEQKMHWKPFMPNISSSELMILQDA

Query:  SWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPR
         WQK N G+    L+ +++           RF     +  PE                    SN   +  ++ Q    C D     +E S QNF ++   
Subjt:  SWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPR

Query:  ELSGGIPIAKRLKKVSSDSSG--NDQVVPYK
        E  G +   KR ++ ++D S    DQVVP +
Subjt:  ELSGGIPIAKRLKKVSSDSSG--NDQVVPYK

AT5G42900.1 cold regulated gene 271.6e-1029.27Show/hide
Query:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE
        RR S     +SD   S+    +SS+            +S   +  +T WT+EKH LYL S+EASFV  L  +    AL   + +       +    S  +
Subjt:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE

Query:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIII---TE
          +L D  WQK N+ + +  ++     +S   L   WI  +    K   P   +   +  S S+    +    S GSA S +Q+    RD + I     E
Subjt:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIII---TE

Query:  VSDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ
        VSDQNFV++  +  +G    +K++K V  S+SS  DQVVP  +  Q
Subjt:  VSDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ

AT5G42900.2 cold regulated gene 271.6e-1029.27Show/hide
Query:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE
        RR S     +SD   S+    +SS+            +S   +  +T WT+EKH LYL S+EASFV  L  +    AL   + +       +    S  +
Subjt:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE

Query:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIII---TE
          +L D  WQK N+ + +  ++     +S   L   WI  +    K   P   +   +  S S+    +    S GSA S +Q+    RD + I     E
Subjt:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIII---TE

Query:  VSDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ
        VSDQNFV++  +  +G    +K++K V  S+SS  DQVVP  +  Q
Subjt:  VSDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ

AT5G42900.3 cold regulated gene 271.2e-1029.39Show/hide
Query:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE
        RR S     +SD   S+    +SS+            +S   +  +T WT+EKH LYL S+EASFV  L  +    AL   + +       +    S  +
Subjt:  RRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPN---ISSSE

Query:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIIT--EV
          +L D  WQK N+ + +  ++     +S   L   WI  +    K   P   +   +  S S+    +    S GSA S +Q+    RD + I    EV
Subjt:  LMILQDASWQKANIGRNDPSLD--KTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIIT--EV

Query:  SDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ
        SDQNFV++  +  +G    +K++K V  S+SS  DQVVP  +  Q
Subjt:  SDQNFVDDHPRELSGGIPIAKRLKKV-SSDSSGNDQVVPYKRSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCATTCTCACACGCAGTCCTCCATCTCGCCGCCGCCGCTTCCAGATCGACGACAATCACTCATGCCGCCCTCTGCTTCCGATTCCACTCGTTCTATCTCTCAATC
CGTCTCTTCTTCCATTACTCTTGATGGGTCCAACCCTTTTTTGTATTCTCATCATTCTCTCCAACTCGATGCGGAGCAAACCCATTGGACAGATGAGAAACACAGATTAT
ATCTTGATTCTTTAGAAGCATCTTTTGTTCAAGGTCTGCATCAACATAGGCGCAGGCATGCTTTGTCGATGGAACAGAAAATGCATTGGAAGCCGTTCATGCCTAATATA
TCTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTCATTGGATAAGACTGCCGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAGTGTACTCCGGAAATTCCTGATGTCCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGACACTTAAGAAACACGT
CGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGCGATTCCAATATAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATCATCCG
AGAGAGTTGTCTGGTGGCATACCTATTGCAAAAAGATTAAAAAAAGTTTCTTCTGATTCGTCGGGCAATGACCAGGTTGTACCATATAAAAGATCAAGCCAGACGTCATA
A
mRNA sequenceShow/hide mRNA sequence
CAAAAAGATCATACCACCATTCACCGCTTCTCTCTCTCTCTCTCTCTCTCTTCCTCTTCATTTCATTTCATTTCTCCACGAGCCTGAATCCCCAGAGGGTTTCGGACCTA
AATTTTCTCCCACCATTTCCATTTGATCCCCTTCTATTTTAGGGCTGTTTCCAACGATTTCGCCTTGTTTTTCATCCCCTCCGTAATGGGTCATTCTCACACGCAGTCCT
CCATCTCGCCGCCGCCGCTTCCAGATCGACGACAATCACTCATGCCGCCCTCTGCTTCCGATTCCACTCGTTCTATCTCTCAATCCGTCTCTTCTTCCATTACTCTTGAT
GGGTCCAACCCTTTTTTGTATTCTCATCATTCTCTCCAACTCGATGCGGAGCAAACCCATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTT
TGTTCAAGGTCTGCATCAACATAGGCGCAGGCATGCTTTGTCGATGGAACAGAAAATGCATTGGAAGCCGTTCATGCCTAATATATCTTCTTCAGAGTTGATGATCCTTC
AAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTCATTGGATAAGACTGCCGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCT
GCAGGAAAACAGTGTACTCCGGAAATTCCTGATGTCCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGACACTTAAGAAACACGTCGAACTCCTGTGGATCTGCCAGAAG
TTCACAGCAGATCCCTCCATGCTGTCGCGATTCCAATATAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATCATCCGAGAGAGTTGTCTGGTGGCATACCTA
TTGCAAAAAGATTAAAAAAAGTTTCTTCTGATTCGTCGGGCAATGACCAGGTTGTACCATATAAAAGATCAAGCCAGACGTCATAATATTATCTTCAGAGCATCCTCAAA
ACTCTATGCCTCCAAATTCAGAACTGTGTTACTGTGTAAGAGGGAGCTGACAACAATTCAATTCAACCAGTAAAAGTACCTGGCTGTTCAAGCTCGTTAACCAAATGCGA
CACGATTTTGTTTTCTTCTCGAAAGAGCATTGTAAAGAAAATAAGGGAAGTGACAGGAAATAATTCTACCAGAAGATCTGTGGCAGGAAGGAGAAAATATGTTTGTGTAT
GGTACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTGAAATATGTTAACCCTTTCATTTCTCCTGTTTTCCATTTTTCTTAGAGTTTGAAAAGATGGAAAGTCTACTA
GATGTAGGGTAATTCATACATGTTATAGAGAAGATAGAAACCCTGATAGTGAGATAGATACACACCCTTTCTCTTATTTGTTTGAAATACTCTCATTCTGAAGTTCTCAA
GTGTAAATTATTACGTAAAACAAAGTGTCATTCTTTTGTGGCACTGAAAGAGAATTGAACAAACTTATTGATTTTCTTAAGGGGGTAAAGTTTTTCCATTGTATTGTATC
CTGGTGTTTTACTCAACTATTTGATATTTGTTACTTTTGTTGCTAGCAGCATATCCTCATTTTGCTGCTAGGTTGAAACATTTGTGTTCAAGCGATTTGGAGGACAGTTA
GATAATGAAATAATAGAGCTTCTGCTCTTATTTATGGAGTTCATCCCAGAAGATGGTCGATGACATTTTACTGACGGGGTTAAGTGCTTGCTGTGGTTTTATTCCACCAA
GCAAAACTCTGGATGAGTTAAAACTAAACAATTTTGTTAAGCATTTGGAAGAGTGCGTGAGTATTTGTTAGTGCTATGTTTGACTGG
Protein sequenceShow/hide protein sequence
MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPNI
SSSELMILQDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHP
RELSGGIPIAKRLKKVSSDSSGNDQVVPYKRSSQTS