; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi06G001092 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi06G001092
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationchr6:36395561..36396073
RNA-Seq ExpressionBhi06G001092
SyntenyBhi06G001092
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586098.1 hypothetical protein SDJN03_18831, partial [Cucurbita argyrosperma subsp. sororia]7.4e-3854.17Show/hide
Query:  SRQSNKSTLEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIF
        SR   ++   ++  PD+PTRMRKQIE+M GY+L LVI KKL +TD+++  GRL L   K+LF F T DE +LL+          +EVKILDEGQ ++ +F
Subjt:  SRQSNKSTLEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIF

Query:  LTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPRTFV
        LTK K+  H  +CL THWNSFV KN LK G +IQLWSFRRVRL+      FTSDLY ALNT+D R F+
Subjt:  LTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPRTFV

KAG6586099.1 hypothetical protein SDJN03_18832, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3552.76Show/hide
Query:  SNKST-LEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLT
        SNK T   + + PDIPTRMRK+IEDM+GY+L +VI KKL D D++K  GR+      + FDF T  E+E+L+          IEVKI+DE Q ++ + LT
Subjt:  SNKST-LEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLT

Query:  KWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR
        K K+  H ++   THWNSFVDKN LK G++IQLWSFRRVRL+      FTSDLY ALNT+D R
Subjt:  KWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR

XP_022938317.1 B3 domain-containing protein At2g31420-like [Cucurbita moschata]1.4e-3153.69Show/hide
Query:  IPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLIT
        +PT MRKQIEDM+GY+L LVI K+L + D+++  GRL     K+ FDF T +E+ELL+          +EVKI+DE Q ++ +FLTK K+    ++   T
Subjt:  IPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLIT

Query:  HWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR
        HWNSFVDKN LK G +IQLWSFRRVRL+      FTSDLY ALNTVD R
Subjt:  HWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR

XP_022938320.1 B3 domain-containing protein At1g05930-like [Cucurbita moschata]1.5e-3856.96Show/hide
Query:  VLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHY
        ++  PD+PTRMRKQIE+M GY+L LVI KKL +TD+++  GRL L   K+LFDF T DE +LL+          +EVKILDEGQ ++ +FLTK K+  H 
Subjt:  VLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHY

Query:  LHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPRTFV
         +CL THWNSFV KN LK G +IQLWSFRRVRL+      FTSDLY ALNT+D R F+
Subjt:  LHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPRTFV

XP_022969589.1 B3 domain-containing protein At2g31420-like [Cucurbita maxima]1.4e-3153.79Show/hide
Query:  MRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLITHWNS
        MRKQIEDM+GY+L +VI KKL D D++K  GR+      + FDF T  E+ELL+          +EVKI+DE Q ++ +FLTK K+  H ++   THWNS
Subjt:  MRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLITHWNS

Query:  FVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR
        FVDKN LK G++IQLWSFRRVRL+      FTSDLY ALNT+D R
Subjt:  FVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR

TrEMBL top hitse value%identityAlignment
A0A6J1CX35 putative B3 domain-containing protein At2g274105.4e-2640.99Show/hide
Query:  RQSNKSTLEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKL-LFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIF
        R+  +  +E+   P++P  MR +I ++ GY + LVIQK+L++TD++K  GRL LP  KL + DF T++ER+LL+++     ++ ++V I+D       I 
Subjt:  RQSNKSTLEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKL-LFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIF

Query:  LTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIHSIGT---FTSDLYLAL
        L KWK+G   L+CL+T WNSFV++  L+ GD IQLWSFR+     +  T    TS L+LA+
Subjt:  LTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIHSIGT---FTSDLYLAL

A0A6J1FDQ3 B3 domain-containing protein At2g31420-like6.5e-3253.69Show/hide
Query:  IPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLIT
        +PT MRKQIEDM+GY+L LVI K+L + D+++  GRL     K+ FDF T +E+ELL+          +EVKI+DE Q ++ +FLTK K+    ++   T
Subjt:  IPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLIT

Query:  HWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR
        HWNSFVDKN LK G +IQLWSFRRVRL+      FTSDLY ALNTVD R
Subjt:  HWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR

A0A6J1FIJ8 B3 domain-containing protein At2g31420-like8.5e-3253.79Show/hide
Query:  MRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLITHWNS
        MRK+IEDM+GY+L +VI KKL D D++K  GR+      + FDF T  E+E+L+          IEVKI+DE Q ++ +FLTK K+  H ++   THWNS
Subjt:  MRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLITHWNS

Query:  FVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR
        FVDKN LK G++IQLWSFRRVRLI      FTSDLY ALNT+D R
Subjt:  FVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR

A0A6J1FJF6 B3 domain-containing protein At1g05930-like7.2e-3956.96Show/hide
Query:  VLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHY
        ++  PD+PTRMRKQIE+M GY+L LVI KKL +TD+++  GRL L   K+LFDF T DE +LL+          +EVKILDEGQ ++ +FLTK K+  H 
Subjt:  VLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHY

Query:  LHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPRTFV
         +CL THWNSFV KN LK G +IQLWSFRRVRL+      FTSDLY ALNT+D R F+
Subjt:  LHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPRTFV

A0A6J1I325 B3 domain-containing protein At2g31420-like6.5e-3253.79Show/hide
Query:  MRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLITHWNS
        MRKQIEDM+GY+L +VI KKL D D++K  GR+      + FDF T  E+ELL+          +EVKI+DE Q ++ +FLTK K+  H ++   THWNS
Subjt:  MRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKVGGHYLHCLITHWNS

Query:  FVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR
        FVDKN LK G++IQLWSFRRVRL+      FTSDLY ALNT+D R
Subjt:  FVDKNLLKRGDIIQLWSFRRVRLIH-SIGTFTSDLYLALNTVDPR

SwissProt top hitse value%identityAlignment
Q5RM09 B3 domain-containing protein At1g059201.1e-0731.25Show/hide
Query:  PDIPTRMRKQIEDMNGY-HLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLT-----KWKVG
        P  P  + + +  MNG     L+I+K L+  DV     RL +P N ++  DF T DE  L+D           E +I +EG    + FL      KW +G
Subjt:  PDIPTRMRKQIEDMNGY-HLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLT-----KWKVG

Query:  ------------GHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR
                     ++   L   W++ V+ N LK GD I LWSFR
Subjt:  ------------GHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR

Q9FLV7 B3 domain-containing protein At5g240501.7e-0833.33Show/hide
Query:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GGHYLHCLITHWNSFVDKNLLK
        L+ +K L  TDV+    RL +PFN LL  DF T  E  +++ +     +  +   ++D+      + L +W++      G + + LI  WN  V+ N LK
Subjt:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GGHYLHCLITHWNSFVDKNLLK

Query:  RGDIIQLWSFR
         GD I LWSFR
Subjt:  RGDIIQLWSFR

Q9LRX6 Putative B3 domain-containing protein At3g248504.4e-0930.46Show/hide
Query:  DIPTRMRKQIEDM-NGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GG
        D P  + K + DM       L+ +K L  TD++    RL +PFN LL  DF T  E  ++  +     +  +   ++D+      + L +W++      G
Subjt:  DIPTRMRKQIEDM-NGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GG

Query:  HYLHCLITHWNSFVDKNLLKRGDIIQLWSFR-RVRLIHSIGTFTSDLYLAL
         + + LI  WN  V+ N LK GD I +WSFR R  L  ++   +S L L L
Subjt:  HYLHCLITHWNSFVDKNLLKRGDIIQLWSFR-RVRLIHSIGTFTSDLYLAL

Q9LSF7 B3 domain-containing protein At3g251822.0e-0934.23Show/hide
Query:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GGHYLHCLITHWNSFVDKNLLK
        L+ +K L  TDV+    RL +PFN LL  DF T  E  ++D++ +   +  +   ++D+      + L +W++      G + + LI  WN  V+ N LK
Subjt:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GGHYLHCLITHWNSFVDKNLLK

Query:  RGDIIQLWSFR
         GD I LWSFR
Subjt:  RGDIIQLWSFR

Q9SIC7 B3 domain-containing protein At2g314204.2e-1231.97Show/hide
Query:  QSNKSTLEVLARPDIPTRMRKQIEDM--------NGYHLHLVIQKK-LEDTDVSKYAGRLCLPFNKL-LFDFTTQDERELLDRNKETRLREKIEVKILDE
        Q NKS +  L   D P      I D         NGY   L+I+++ L  TD+ K  G L +  +KL   DF T+DE   LD +     R+ ++V ++D 
Subjt:  QSNKSTLEVLARPDIPTRMRKQIEDM--------NGYHLHLVIQKK-LEDTDVSKYAGRLCLPFNKL-LFDFTTQDERELLDRNKETRLREKIEVKILDE

Query:  GQTMTSIFLTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR
              ++L KW     + + L   WN+ +DK + K  D+I++WSFR
Subjt:  GQTMTSIFLTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR

Arabidopsis top hitse value%identityAlignment
AT1G05920.1 Domain of unknown function (DUF313)7.7e-0931.25Show/hide
Query:  PDIPTRMRKQIEDMNGY-HLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLT-----KWKVG
        P  P  + + +  MNG     L+I+K L+  DV     RL +P N ++  DF T DE  L+D           E +I +EG    + FL      KW +G
Subjt:  PDIPTRMRKQIEDMNGY-HLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLT-----KWKVG

Query:  ------------GHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR
                     ++   L   W++ V+ N LK GD I LWSFR
Subjt:  ------------GHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR

AT1G32030.1 Domain of unknown function (DUF313)1.3e-0833.04Show/hide
Query:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDE-RELLDRNKETRLREKIEVKILDEGQTMTSIFL-----TKWKVGGHYLHCLITHWNSFVDKNLL
        L+ +K L +TDV     RL +PFN L+  DF T  E R LL+   +T   + +   ++D  +    + L      K+   G   + +I  WN  V+ N+L
Subjt:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDE-RELLDRNKETRLREKIEVKILDEGQTMTSIFL-----TKWKVGGHYLHCLITHWNSFVDKNLL

Query:  KRGDIIQLWSFRRVR
        ++ D I +WSFRR R
Subjt:  KRGDIIQLWSFRRVR

AT2G31420.1 Domain of unknown function (DUF313)3.0e-1331.97Show/hide
Query:  QSNKSTLEVLARPDIPTRMRKQIEDM--------NGYHLHLVIQKK-LEDTDVSKYAGRLCLPFNKL-LFDFTTQDERELLDRNKETRLREKIEVKILDE
        Q NKS +  L   D P      I D         NGY   L+I+++ L  TD+ K  G L +  +KL   DF T+DE   LD +     R+ ++V ++D 
Subjt:  QSNKSTLEVLARPDIPTRMRKQIEDM--------NGYHLHLVIQKK-LEDTDVSKYAGRLCLPFNKL-LFDFTTQDERELLDRNKETRLREKIEVKILDE

Query:  GQTMTSIFLTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR
              ++L KW     + + L   WN+ +DK + K  D+I++WSFR
Subjt:  GQTMTSIFLTKWKVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFR

AT3G24850.1 Domain of unknown function (DUF313)3.1e-1030.46Show/hide
Query:  DIPTRMRKQIEDM-NGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GG
        D P  + K + DM       L+ +K L  TD++    RL +PFN LL  DF T  E  ++  +     +  +   ++D+      + L +W++      G
Subjt:  DIPTRMRKQIEDM-NGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GG

Query:  HYLHCLITHWNSFVDKNLLKRGDIIQLWSFR-RVRLIHSIGTFTSDLYLAL
         + + LI  WN  V+ N LK GD I +WSFR R  L  ++   +S L L L
Subjt:  HYLHCLITHWNSFVDKNLLKRGDIIQLWSFR-RVRLIHSIGTFTSDLYLAL

AT5G24050.1 Domain of unknown function (DUF313)1.2e-0933.33Show/hide
Query:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GGHYLHCLITHWNSFVDKNLLK
        L+ +K L  TDV+    RL +PFN LL  DF T  E  +++ +     +  +   ++D+      + L +W++      G + + LI  WN  V+ N LK
Subjt:  LVIQKKLEDTDVSKYAGRLCLPFNKLL-FDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKWKV-----GGHYLHCLITHWNSFVDKNLLK

Query:  RGDIIQLWSFR
         GD I LWSFR
Subjt:  RGDIIQLWSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGGCAGAGCAATAAAAGTACATTAGAGGTATTAGCAAGGCCGGACATTCCAACTCGAATGAGAAAACAAATCGAAGATATGAATGGATACCATCTCCAT
TTGGTAATACAAAAGAAATTAGAAGACACTGATGTTAGCAAGTACGCAGGTCGTTTGTGTCTTCCTTTCAACAAACTTTTATTTGATTTCACCACCCAAGATGAG
AGAGAGCTGCTGGACAGAAATAAAGAGACAAGATTAAGAGAGAAGATAGAGGTGAAGATTCTTGATGAAGGTCAAACGATGACCTCCATTTTCTTGACCAAATGG
AAGGTTGGGGGACACTATCTCCACTGTCTCATCACTCATTGGAATTCTTTTGTGGACAAGAATTTGTTAAAAAGAGGAGACATTATTCAACTTTGGAGTTTCCGA
AGAGTTAGACTTATACATTCTATTGGAACATTCACTTCTGATCTTTATTTAGCTTTGAATACGGTTGACCCTCGAACTTTTGTTTGGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGGCAGAGCAATAAAAGTACATTAGAGGTATTAGCAAGGCCGGACATTCCAACTCGAATGAGAAAACAAATCGAAGATATGAATGGATACCATCTCCAT
TTGGTAATACAAAAGAAATTAGAAGACACTGATGTTAGCAAGTACGCAGGTCGTTTGTGTCTTCCTTTCAACAAACTTTTATTTGATTTCACCACCCAAGATGAG
AGAGAGCTGCTGGACAGAAATAAAGAGACAAGATTAAGAGAGAAGATAGAGGTGAAGATTCTTGATGAAGGTCAAACGATGACCTCCATTTTCTTGACCAAATGG
AAGGTTGGGGGACACTATCTCCACTGTCTCATCACTCATTGGAATTCTTTTGTGGACAAGAATTTGTTAAAAAGAGGAGACATTATTCAACTTTGGAGTTTCCGA
AGAGTTAGACTTATACATTCTATTGGAACATTCACTTCTGATCTTTATTTAGCTTTGAATACGGTTGACCCTCGAACTTTTGTTTGGACATAA
Protein sequenceShow/hide protein sequence
MSRQSNKSTLEVLARPDIPTRMRKQIEDMNGYHLHLVIQKKLEDTDVSKYAGRLCLPFNKLLFDFTTQDERELLDRNKETRLREKIEVKILDEGQTMTSIFLTKW
KVGGHYLHCLITHWNSFVDKNLLKRGDIIQLWSFRRVRLIHSIGTFTSDLYLALNTVDPRTFVWT