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Bhi06G001097 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi06G001097
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
Description60S acidic ribosomal protein P3
Genome locationchr6:36536566..36538681
RNA-Seq ExpressionBhi06G001097
SyntenyBhi06G001097
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]3.9e-4995.08Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF   GGGAAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]3.8e-5298.36Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI  GGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_022153281.1 60S acidic ribosomal protein P3-2 [Momordica charantia]3.2e-4386.89Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSG +WTA QYSGDLEGSA STYELQRKLVQ+AL+VDSSGGVQSSFS+I+PTSAVFQVI+GGGGGGGFI GGG AAAAP+GG AP AAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEE KEESDD DLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]2.2e-4788.52Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TPTSAVFQVI+GG  GGGFI GGGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDD+DLG SLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]1.4e-54100Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein1.9e-4995.08Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP+SAVFQVIVGGG GGGF   GGGAAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-21.8e-5298.36Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI  GGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-21.8e-5298.36Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFI  GGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like1.0e-4788.52Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TPTSAVFQVI+GG  GGGFI GGGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDD+DLG SLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like1.0e-4788.52Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTF+CRSSGGKWTANQYSGDLEGSADSTY+LQR LVQ+ LSVD SGGVQSSFS++TPTSAVFQVI+GG  GGGFI GGGGAAAAPAGGDAPAAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDD+DLG SLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

SwissProt top hitse value%identityAlignment
O24413 60S acidic ribosomal protein P33.6e-2960.98Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGG-GGGGGFIGGGGGAAAAPAGGDAPAAAEA
        MGV+TFVCR++GG+WTA Q+SG++E SA + YELQR+LV +A + DS  GVQSSFS +TP+SAVFQVIVG  GGG   + GGGG  AA +GG   AAAEA
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGG-GGGGGFIGGGGGAAAAPAGGDAPAAAEA

Query:  PAEKKEEVKEESDDEDLGLSLFD
        P E+K+E ++E  D+D+G SLFD
Subjt:  PAEKKEEVKEESDDEDLGLSLFD

P56724 60S acidic ribosomal protein P31.0e-2864.52Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGV+TFVCRSSG +WTA Q  G+LE SA + YELQR+LV +A + DS+ GVQSSFS ++P+SAVFQVI+G  GGG  IGGG  A AA  G    AAAEAP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  --AEKKEEVKEESDDEDLGLSLFD
           EKKEE KEES+D DLG SLFD
Subjt:  --AEKKEEVKEESDDEDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-25.3e-3365.29Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GGG AA    GG+A AA +  
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLF
         +KKEE +EE  + D G  LF
Subjt:  AEKKEEVKEESDDEDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-16.5e-3166.67Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++PTSAVFQVIVGGGGGGGF  GG    AA +GG A  AA AP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDE--DLGLSLF
         E  E+ KEES++E  D G  LF
Subjt:  AEKKEEVKEESDDE--DLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family4.6e-3266.67Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++PTSAVFQVIVGGGGGGGF  GG    AA +GG A  AA AP
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDE--DLGLSLF
         E  E+ KEES++E  D G  LF
Subjt:  AEKKEEVKEESDDE--DLGLSLF

AT5G57290.1 60S acidic ribosomal protein family3.8e-3465.29Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GGG AA    GG+A AA +  
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLF
         +KKEE +EE  + D G  LF
Subjt:  AEKKEEVKEESDDEDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family4.8e-2975.61Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGG
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GGG
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGG

AT5G57290.3 60S acidic ribosomal protein family7.2e-3365.29Show/hide
Query:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP
        MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++PTSAVF V++GGGGGGGF  GGG AA    GG+A AA +  
Subjt:  MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLF
         +KKEE +EE  + D G  LF
Subjt:  AEKKEEVKEESDDEDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGTAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCTGCCGACTCCACCTACGAGCTCCAG
AGGAAGCTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGTGTTCAGTCCTCTTTCTCCTTCATCACTCCCACCTCCGCCGTTTTCCAGGTGATCGTTGGT
GGTGGCGGCGGTGGCGGTTTCATTGGTGGTGGTGGAGGAGCTGCAGCTGCCCCTGCTGGAGGAGATGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAA
GAGGTGAAGGAAGAGAGTGATGATGAAGACCTTGGCCTATCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ACCCTCGTTTTCCTCTCTCGCTAGGGTTTCATCTGTTAACATAAAAACCACACACAATCCGCCGAAGAGAGCCGTCCACACTCAATTCTCTCCATTTTCTTCAAG
CAAAATCCCGATTCTAAGATCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGTAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCT
CTGCCGACTCCACCTACGAGCTCCAGAGGAAGCTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGTGTTCAGTCCTCTTTCTCCTTCATCACTCCCACCT
CCGCCGTTTTCCAGGTGATCGTTGGTGGTGGCGGCGGTGGCGGTTTCATTGGTGGTGGTGGAGGAGCTGCAGCTGCCCCTGCTGGAGGAGATGCTCCAGCTGCTG
CAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGTGATGATGAAGACCTTGGCCTATCACTTTTTGATTAGTTGGCACATAAAGAATTTGAGAGTG
AAGGGACGAAGTTTGCCAAGCAATTAGGGGTG
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGGGAAAAPAGGDAPAAAEAPAEKKE
EVKEESDDEDLGLSLFD