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Bhi08G000108 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G000108
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
Descriptionhistone H2B-like
Genome locationchr8:5006523..5006907
RNA-Seq ExpressionBhi08G000108
SyntenyBhi08G000108
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000558 - Histone H2B
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052101.1 histone H2B type 1-A-like [Cucumis melo var. makuwa]7.5e-3791.21Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

XP_008462313.1 PREDICTED: histone H2B type 1-A-like [Cucumis melo]7.5e-3791.21Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

XP_022969528.1 histone H2B, gonadal-like isoform X1 [Cucurbita maxima]6.3e-3685.71Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPE+GISG+AMVILNN MNDMF+RLA+EATKLSKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY H +T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

XP_031736247.1 histone H2B [Cucumis sativus]9.8e-3790.11Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPE+GISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

XP_038894659.1 LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida]7.7e-42100Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

TrEMBL top hitse value%identityAlignment
A0A0A0LSH9 Histone domain-containing protein4.7e-3790.11Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPE+GISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

A0A1S3CH74 histone H2B type 1-A-like3.6e-3791.21Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

A0A5A7UF12 Histone H2B type 1-A-like3.6e-3791.21Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

A0A6J1FBI7 histone H2B.6-like isoform X13.1e-3685.71Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPE+GISG+AMVILNN MNDMF+RLA+EATKLSKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY H +T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

A0A6J1I190 histone H2B, gonadal-like isoform X13.1e-3685.71Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT
        RYVFKVLKQVHPE+GISG+AMVILNN MNDMF+RLA+EATKLSKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY H +T
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

SwissProt top hitse value%identityAlignment
A0A2R8Y619 Histone H2B type 2-E12.8e-2665.48Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y++KVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA +L++Y+G  TL+SRE+Q AVRL+LPGEL KHA++EGTKAV+ Y S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

P40283 Histone H2B.113.6e-2666.67Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA+KL++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

Q9SGE3 Histone H2B.24.3e-2766.28Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSY
        RYV+KV+KQVHP++GI+ KAM ++N FM DMF+R+A EA +LS YT   TLSSREI+ AVRLVLPGEL +HA+AEG+KAVS +V Y
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSY

Q9SI96 Histone H2B.33.6e-2666.67Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA+KL++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

Q9ZUS0 Histone H2B.42.1e-2665.48Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP++GISGKAM I+N+F+ND+F++LA E++KL++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

Arabidopsis top hitse value%identityAlignment
AT1G08170.1 Histone superfamily protein3.0e-2866.28Show/hide
Query:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSY
        RYV+KV+KQVHP++GI+ KAM ++N FM DMF+R+A EA +LS YT   TLSSREI+ AVRLVLPGEL +HA+AEG+KAVS +V Y
Subjt:  RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSY

AT2G28720.1 Histone superfamily protein2.6e-2766.67Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA+KL++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

AT2G37470.1 Histone superfamily protein1.5e-2765.48Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP++GISGKAM I+N+F+ND+F++LA E++KL++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

AT3G53650.1 Histone superfamily protein2.6e-2765.48Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP+IGISGKAM I+N+F+ND+F++LA E+++L++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS

AT5G02570.1 Histone superfamily protein2.6e-2765.48Show/hide
Query:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS
        Y+FKVLKQVHP+IGISGKAM I+N+F+ND+F++LA E+++L++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Subjt:  YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTATGTGTTTAAGGTGCTGAAGCAAGTGCATCCAGAGATAGGGATCTCAGGGAAAGCCATGGTCATTTTGAACAATTTCATGAATGATATGTTTCAGAGACTTGCTGA
TGAGGCAACTAAACTCTCAAAATACACAGGTGGAATGACGCTGTCGTCGAGGGAAATCCAAGGGGCGGTGAGGTTAGTGTTGCCAGGAGAGCTGGGGAAGCACGCCATTG
CTGAGGGAACTAAAGCTGTCTCTGCTTATGTATCTTATGTTCATACGAAAACCTAA
mRNA sequenceShow/hide mRNA sequence
AGGTATGTGTTTAAGGTGCTGAAGCAAGTGCATCCAGAGATAGGGATCTCAGGGAAAGCCATGGTCATTTTGAACAATTTCATGAATGATATGTTTCAGAGACTTGCTGA
TGAGGCAACTAAACTCTCAAAATACACAGGTGGAATGACGCTGTCGTCGAGGGAAATCCAAGGGGCGGTGAGGTTAGTGTTGCCAGGAGAGCTGGGGAAGCACGCCATTG
CTGAGGGAACTAAAGCTGTCTCTGCTTATGTATCTTATGTTCATACGAAAACCTAA
Protein sequenceShow/hide protein sequence
RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT