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Bhi08G000109 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G000109
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
Descriptionhistone H2B-like
Genome locationchr8:5007826..5008150
RNA-Seq ExpressionBhi08G000109
SyntenyBhi08G000109
Gene Ontology termsGO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052101.1 histone H2B type 1-A-like [Cucumis melo var. makuwa]4.3e-3177.57Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +PVEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA 
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA

Query:  TPEVEPE
        TPE+EPE
Subjt:  TPEVEPE

TYJ98095.1 histone H2B type 1-A-like [Cucumis melo var. makuwa]1.5e-3177.78Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +PVEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA 
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA

Query:  TPEVEPEV
        TPE+EPEV
Subjt:  TPEVEPEV

XP_008462313.1 PREDICTED: histone H2B type 1-A-like [Cucumis melo]8.6e-3277.06Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +PVEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA 
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA

Query:  TPEVEPEVR
        TPE+EPEV+
Subjt:  TPEVEPEVR

XP_031736247.1 histone H2B [Cucumis sativus]2.1e-3072.9Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+  +T +G GG++FRRT+PVEE     +QP + PVSEDF+ R+ TDSTSQLTEDTA TP
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP

Query:  EVEPEVR
        E+EP++R
Subjt:  EVEPEVR

XP_038894659.1 LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida]2.9e-48100Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP
        MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP

Query:  EVEPEVRN
        EVEPEVRN
Subjt:  EVEPEVRN

TrEMBL top hitse value%identityAlignment
A0A0A0LSH9 Histone domain-containing protein1.0e-3072.9Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+  +T +G GG++FRRT+PVEE     +QP + PVSEDF+ R+ TDSTSQLTEDTA TP
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATP

Query:  EVEPEVR
        E+EP++R
Subjt:  EVEPEVR

A0A1S3CH74 histone H2B type 1-A-like4.2e-3277.06Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +PVEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA 
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA

Query:  TPEVEPEVR
        TPE+EPEV+
Subjt:  TPEVEPEVR

A0A5A7UF12 Histone H2B type 1-A-like2.1e-3177.57Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +PVEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA 
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA

Query:  TPEVEPE
        TPE+EPE
Subjt:  TPEVEPE

A0A5D3BHX3 Histone H2B type 1-A-like7.1e-3277.78Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA
        MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +PVEE K+P P EQP T PVSE+F+ R+ TDSTSQLTEDTA 
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEE-KAP-PREQPKTFPVSEDFDTRKPTDSTSQLTEDTAA

Query:  TPEVEPEV
        TPE+EPEV
Subjt:  TPEVEPEV

A0A6J1FGB7 histone H2B.1-like isoform X22.6e-1858.72Show/hide
Query:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGD-VFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAAT
        MPPRRSRR+VGSVVRTTT++VEETV VAV+E ESQD+TQEP T +T    GGD VFRRTIPVE+       P+T PV  D    +P DSTS++TED   T
Subjt:  MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGD-VFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAAT

Query:  PEVEPEVRN
         ++E + R+
Subjt:  PEVEPEVRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGAGACGATCCCGCAGAGTCGTTGGTTCTGTCGTCCGGACGACCACGAGGATGGTGGAAGAAACTGTACAAGTGGCAGTTCTGGAGAAAGAAAGCCAGGATTT
GACTCAAGAACCCGAAACGACACAAACGGCTGAGGGCCGCGGCGGTGATGTCTTCCGGAGGACTATCCCGGTGGAAGAGAAGGCTCCACCACGGGAACAGCCGAAAACTT
TTCCGGTATCGGAAGATTTTGACACAAGAAAGCCAACGGATTCGACGTCGCAGCTCACGGAGGACACCGCTGCGACTCCGGAGGTGGAACCCGAGGTCCGGAATG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGAGACGATCCCGCAGAGTCGTTGGTTCTGTCGTCCGGACGACCACGAGGATGGTGGAAGAAACTGTACAAGTGGCAGTTCTGGAGAAAGAAAGCCAGGATTT
GACTCAAGAACCCGAAACGACACAAACGGCTGAGGGCCGCGGCGGTGATGTCTTCCGGAGGACTATCCCGGTGGAAGAGAAGGCTCCACCACGGGAACAGCCGAAAACTT
TTCCGGTATCGGAAGATTTTGACACAAGAAAGCCAACGGATTCGACGTCGCAGCTCACGGAGGACACCGCTGCGACTCCGGAGGTGGAACCCGAGGTCCGGAATG
Protein sequenceShow/hide protein sequence
MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIPVEEKAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATPEVEPEVRN