; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi08G000128 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G000128
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationchr8:5484259..5484654
RNA-Seq ExpressionBhi08G000128
SyntenyBhi08G000128
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR031052 - FHY3/FAR1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038895478.1 protein FAR1-RELATED SEQUENCE 11-like isoform X1 [Benincasa hispida]2.1e-6999.23Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ+
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV

XP_038895480.1 protein FAR1-RELATED SEQUENCE 11-like isoform X2 [Benincasa hispida]4.8e-69100Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

XP_038895481.1 protein FAR1-RELATED SEQUENCE 11-like isoform X3 [Benincasa hispida]4.8e-69100Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

XP_038895482.1 protein FAR1-RELATED SEQUENCE 11-like isoform X4 [Benincasa hispida]4.8e-69100Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

XP_038895483.1 protein FAR1-RELATED SEQUENCE 11-like isoform X5 [Benincasa hispida]4.8e-69100Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

TrEMBL top hitse value%identityAlignment
A0A0A0KPF5 Protein FAR1-RELATED SEQUENCE1.0e-6494.57Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        +CLKDAIAMEL TTKHALCIWMIVAKFPSW NAILGERYNEWKS FCRLYNLE IEDFEIGWRDMVNSFGLHTNRH+ANLYSLRSLWALPFLR+HFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

A0A1S4E547 Protein FAR1-RELATED SEQUENCE2.6e-6595.38Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        +CLKDAIAMEL TTKHALCIWMIVAKFPSW NAILGERYNEWKS FCRLYNLE IEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLR+HFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV

A0A1S4E549 Protein FAR1-RELATED SEQUENCE7.7e-6595.35Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        +CLKDAIAMEL TTKHALCIWMIVAKFPSW NAILGERYNEWKS FCRLYNLE IEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLR+HFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

A0A1S4E5V1 Protein FAR1-RELATED SEQUENCE7.7e-6595.35Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        +CLKDAIAMEL TTKHALCIWMIVAKFPSW NAILGERYNEWKS FCRLYNLE IEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLR+HFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQ
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQ

A0A5A7VIG2 Protein FAR1-RELATED SEQUENCE2.6e-6595.38Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        +CLKDAIAMEL TTKHALCIWMIVAKFPSW NAILGERYNEWKS FCRLYNLE IEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLR+HFFAGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
        ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV

SwissProt top hitse value%identityAlignment
Q5UBY2 Protein FAR1-RELATED SEQUENCE 11.4e-0724.06Show/hide
Query:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAI------LGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHF
        LK+A+     +++H   +W  + + P     +      L +  N+   G C+       EDFE  W ++V+ F +  N  + +LY  R  W   ++++  
Subjt:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAI------LGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHF

Query:  FAGMATIGQSKAINAFIQRFLSAQTRLAQFIEQ
         AGM T  +S ++N+ + +++  +T    F+EQ
Subjt:  FAGMATIGQSKAINAFIQRFLSAQTRLAQFIEQ

Q9S793 Protein FAR1-RELATED SEQUENCE 83.0e-0529.63Show/hide
Query:  LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMATIGQSKAINAFI-QRFLSAQTRLAQFIE
        +Y    +E+FE  W +M+  FG+  N  + +++  R LWA  +L++ F AG  T         FI   ++   T L +F+E
Subjt:  LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMATIGQSKAINAFI-QRFLSAQTRLAQFIE

Q9SSQ4 Protein FAR1-RELATED SEQUENCE 67.5e-0926.56Show/hide
Query:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCR-LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMA
        L+ AI+     +     +  I+ K P     +    Y+  +  F + +Y    + +FE  W  MV++FG+  N  + +LY  R+ WA  +L++ FFAG+A
Subjt:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCR-LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMA

Query:  TIGQSKAINAFIQRFLSAQTRLAQFIEQ
             + +  F +R++  QT L +F+++
Subjt:  TIGQSKAINAFIQRFLSAQTRLAQFIEQ

Q9SY66 Protein FAR1-RELATED SEQUENCE 114.1e-5575.38Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLK+AIA E+  TKHALCIWM+V KFPSW NA LGERYN+WK+ F RLY+LE +E+FE+GWRDMVNSFGLHTNRH+ NLY+ RSLW+LP+LR+HF AGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
           G+SKAINAFIQRFLSAQTRLA F+EQV
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV

Arabidopsis top hitse value%identityAlignment
AT1G10240.1 FAR1-related sequence 112.9e-5675.38Show/hide
Query:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM
        MCLK+AIA E+  TKHALCIWM+V KFPSW NA LGERYN+WK+ F RLY+LE +E+FE+GWRDMVNSFGLHTNRH+ NLY+ RSLW+LP+LR+HF AGM
Subjt:  MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGM

Query:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV
           G+SKAINAFIQRFLSAQTRLA F+EQV
Subjt:  ATIGQSKAINAFIQRFLSAQTRLAQFIEQV

AT1G52520.1 FAR1-related sequence 65.4e-1026.56Show/hide
Query:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCR-LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMA
        L+ AI+     +     +  I+ K P     +    Y+  +  F + +Y    + +FE  W  MV++FG+  N  + +LY  R+ WA  +L++ FFAG+A
Subjt:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCR-LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMA

Query:  TIGQSKAINAFIQRFLSAQTRLAQFIEQ
             + +  F +R++  QT L +F+++
Subjt:  TIGQSKAINAFIQRFLSAQTRLAQFIEQ

AT1G80010.1 FAR1-related sequence 82.1e-0629.63Show/hide
Query:  LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMATIGQSKAINAFI-QRFLSAQTRLAQFIE
        +Y    +E+FE  W +M+  FG+  N  + +++  R LWA  +L++ F AG  T         FI   ++   T L +F+E
Subjt:  LYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMATIGQSKAINAFI-QRFLSAQTRLAQFIE

AT4G19990.1 FAR1-related sequence 11.0e-0824.06Show/hide
Query:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAI------LGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHF
        LK+A+     +++H   +W  + + P     +      L +  N+   G C+       EDFE  W ++V+ F +  N  + +LY  R  W   ++++  
Subjt:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAI------LGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHF

Query:  FAGMATIGQSKAINAFIQRFLSAQTRLAQFIEQ
         AGM T  +S ++N+ + +++  +T    F+EQ
Subjt:  FAGMATIGQSKAINAFIQRFLSAQTRLAQFIEQ

AT4G19990.2 FAR1-related sequence 11.0e-0824.06Show/hide
Query:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAI------LGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHF
        LK+A+     +++H   +W  + + P     +      L +  N+   G C+       EDFE  W ++V+ F +  N  + +LY  R  W   ++++  
Subjt:  LKDAIAMELSTTKHALCIWMIVAKFPSWCNAI------LGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHF

Query:  FAGMATIGQSKAINAFIQRFLSAQTRLAQFIEQ
         AGM T  +S ++N+ + +++  +T    F+EQ
Subjt:  FAGMATIGQSKAINAFIQRFLSAQTRLAQFIEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCTCAAAGATGCCATAGCGATGGAACTGTCAACTACTAAGCATGCACTTTGTATTTGGATGATTGTGGCGAAGTTTCCATCCTGGTGTAATGCTATTCTT
GGAGAACGTTACAATGAGTGGAAAAGTGGATTCTGTCGATTATATAATCTGGAGTTAATTGAGGATTTTGAAATAGGGTGGAGGGACATGGTGAATTCCTTTGGT
CTGCATACTAATAGGCACGTAGCCAACTTGTACAGTCTGCGTTCTCTTTGGGCATTGCCATTCTTGAGAAACCATTTCTTCGCTGGAATGGCAACCATTGGCCAA
TCAAAAGCAATCAATGCTTTTATTCAGCGATTTTTGAGTGCACAGACTCGACTTGCTCAGTTTATTGAACAGGTATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCTCAAAGATGCCATAGCGATGGAACTGTCAACTACTAAGCATGCACTTTGTATTTGGATGATTGTGGCGAAGTTTCCATCCTGGTGTAATGCTATTCTT
GGAGAACGTTACAATGAGTGGAAAAGTGGATTCTGTCGATTATATAATCTGGAGTTAATTGAGGATTTTGAAATAGGGTGGAGGGACATGGTGAATTCCTTTGGT
CTGCATACTAATAGGCACGTAGCCAACTTGTACAGTCTGCGTTCTCTTTGGGCATTGCCATTCTTGAGAAACCATTTCTTCGCTGGAATGGCAACCATTGGCCAA
TCAAAAGCAATCAATGCTTTTATTCAGCGATTTTTGAGTGCACAGACTCGACTTGCTCAGTTTATTGAACAGGTATGCTGA
Protein sequenceShow/hide protein sequence
MCLKDAIAMELSTTKHALCIWMIVAKFPSWCNAILGERYNEWKSGFCRLYNLELIEDFEIGWRDMVNSFGLHTNRHVANLYSLRSLWALPFLRNHFFAGMATIGQ
SKAINAFIQRFLSAQTRLAQFIEQVC