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Bhi08G000152 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G000152
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
Descriptionnucleolar complex protein 4 homolog
Genome locationchr8:6436260..6436412
RNA-Seq ExpressionBhi08G000152
SyntenyBhi08G000152
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0030692 - Noc4p-Nop14p complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23279.1 nucleolar complex protein 4-like protein [Cucumis melo var. makuwa]2.2e-1484.31Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
        LKK+LKRVPLAFYQAP TTLFSESDF GWSFD+EHS+K NI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
XP_008447831.1 PREDICTED: nucleolar complex protein 4 homolog [Cucumis melo]2.2e-1484.31Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
        LKK+LKRVPLAFYQAP TTLFSESDF GWSFD+EHS+K NI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
XP_011658634.1 nucleolar complex protein 4 homolog [Cucumis sativus]2.6e-1586Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
        LKK+LKRVPLAFYQAP TTLFSESDF GWSFD+EHSEKNI+ SDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
XP_038887732.1 protein NUCLEOLAR COMPLEX ASSOCIATED 4 isoform X1 [Benincasa hispida]8.9e-1686Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
        LKK+LKRVPLAFYQ P TTLFSESDF GWSF+HEHSEKNI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
XP_038887733.1 protein NUCLEOLAR COMPLEX ASSOCIATED 4 isoform X2 [Benincasa hispida]8.9e-1686Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
        LKK+LKRVPLAFYQ P TTLFSESDF GWSF+HEHSEKNI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
TrEMBL top hitse value%identityAlignment
A0A0A0K685 CBF domain-containing protein1.3e-1586Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
        LKK+LKRVPLAFYQAP TTLFSESDF GWSFD+EHSEKNI+ SDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
A0A1S3BIC0 nucleolar complex protein 4 homolog1.1e-1484.31Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
        LKK+LKRVPLAFYQAP TTLFSESDF GWSFD+EHS+K NI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
A0A5D3DJ82 Nucleolar complex protein 4-like protein1.1e-1484.31Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
        LKK+LKRVPLAFYQAP TTLFSESDF GWSFD+EHS+K NI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEK-NINGSDHLLAKR
A0A6J1C6T4 nucleolar complex protein 4 homolog1.8e-1482Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
        LKK++KRVPLAFYQA  TTLFSESDFTGWSFDH+HSE NI+ SDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
A0A6J1HZT8 nucleolar complex protein 4 homolog B1.8e-1482Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
        LKK++KRVPLAFYQA  T+LFSESDF GWSF+HEHSEKNI+GSDHL AKR
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR
SwissProt top hitse value%identityAlignment
F4IMH3 Protein NUCLEOLAR COMPLEX ASSOCIATED 42.8e-0454.84Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSF
        +++R+K+VPLAFY+   T+LF++SDF GW+F
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSF
Arabidopsis top hitse value%identityAlignment
AT2G17250.1 CCAAT-binding factor2.0e-0554.84Show/hide
Query:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSF
        +++R+K+VPLAFY+   T+LF++SDF GW+F
Subjt:  LKKRLKRVPLAFYQAPSTTLFSESDFTGWSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAAAAAGAGACTGAAGCGAGTCCCCCTGGCATTCTACCAAGCACCCTCTACCACCTTGTTTTCGGAGTCTGATTTCACTGGCTGGAGTTTCGATCACGAACACAGTGA
GAAGAATATTAATGGTAGTGATCATCTTTTGGCAAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
TTGAAAAAGAGACTGAAGCGAGTCCCCCTGGCATTCTACCAAGCACCCTCTACCACCTTGTTTTCGGAGTCTGATTTCACTGGCTGGAGTTTCGATCACGAACACAGTGA
GAAGAATATTAATGGTAGTGATCATCTTTTGGCAAAAAGATAG
Protein sequenceShow/hide protein sequence
LKKRLKRVPLAFYQAPSTTLFSESDFTGWSFDHEHSEKNINGSDHLLAKR