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Bhi08G000736 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G000736
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr8:28348445..28348720
RNA-Seq ExpressionBhi08G000736
SyntenyBhi08G000736
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061440.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]9.6e-2470.73Show/hide
Query:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        E E   E L  +LNQF DVFEWL +LPPR++IEH IHLKEGTNP  VRPYRY YHQK +MEKLV E+L S IIRPS SPYSS
Subjt:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

KAA0066203.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.1e-2363.74Show/hide
Query:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        L AE+G   E+E   E L  +LNQF DVF W  +LPPR++IEH+I LK+GTNP  VRPYRY YHQK +MEKLV E+L SS+IRPS+SPYSS
Subjt:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

TYK01212.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.1e-2363.74Show/hide
Query:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        L AE+G   E+E   E L  +LNQF DVF W  +LPPR++IEH+I LK+GTNP  VRPYRY YHQK +MEKLV E+L SS+IRPS+SPYSS
Subjt:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

TYK21518.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]9.6e-2470.73Show/hide
Query:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        E E   E L  +LNQF DVFEWL +LPPR++IEH IHLKEGTNP  VRPYRY YHQK +MEKLV E+L S IIRPS SPYSS
Subjt:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

XP_016903467.1 PREDICTED: uncharacterized protein LOC107992206 [Cucumis melo]9.6e-2470.73Show/hide
Query:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        E E   E L  +LNQF DVFEWL +LPPR++IEH IHLKEGTNP  VRPYRY YHQK +MEKLV E+L S IIRPS SPYSS
Subjt:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

TrEMBL top hitse value%identityAlignment
A0A1S4E5H0 uncharacterized protein LOC1079922064.6e-2470.73Show/hide
Query:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        E E   E L  +LNQF DVFEWL +LPPR++IEH IHLKEGTNP  VRPYRY YHQK +MEKLV E+L S IIRPS SPYSS
Subjt:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

A0A5A7V2E8 Transposon Ty3-G Gag-Pol polyprotein4.6e-2470.73Show/hide
Query:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        E E   E L  +LNQF DVFEWL +LPPR++IEH IHLKEGTNP  VRPYRY YHQK +MEKLV E+L S IIRPS SPYSS
Subjt:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

A0A5A7VDE8 Transposon Ty3-I Gag-Pol polyprotein1.0e-2363.74Show/hide
Query:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        L AE+G   E+E   E L  +LNQF DVF W  +LPPR++IEH+I LK+GTNP  VRPYRY YHQK +MEKLV E+L SS+IRPS+SPYSS
Subjt:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

A0A5D3BR14 Transposon Ty3-I Gag-Pol polyprotein1.0e-2363.74Show/hide
Query:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        L AE+G   E+E   E L  +LNQF DVF W  +LPPR++IEH+I LK+GTNP  VRPYRY YHQK +MEKLV E+L SS+IRPS+SPYSS
Subjt:  LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

A0A5D3DDC2 Ty3/gypsy retrotransposon protein4.6e-2470.73Show/hide
Query:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS
        E E   E L  +LNQF DVFEWL +LPPR++IEH IHLKEGTNP  VRPYRY YHQK +MEKLV E+L S IIRPS SPYSS
Subjt:  EVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGCAGCTGAGCAAGGGGAATACAACGAAGTCGAATTAGTACCAGAGTCTCTGTCAGATTTGCTCAATCAGTTTCAAGATGTATTTGAATGGCTCAGGGAGTTACCCCC
TCGTCAGAATATTGAACATTACATTCATTTAAAGGAAGGGACCAACCCCACAAAAGTTCGTCCATATAGGTATGTATATCATCAAAAGGCCAAGATGGAGAAATTAGTGG
AGGAAATTCTAGACTCGAGCATCATTAGACCGAGCATCAGCCCTTATTCTAGCCAT
mRNA sequenceShow/hide mRNA sequence
TTAGCAGCTGAGCAAGGGGAATACAACGAAGTCGAATTAGTACCAGAGTCTCTGTCAGATTTGCTCAATCAGTTTCAAGATGTATTTGAATGGCTCAGGGAGTTACCCCC
TCGTCAGAATATTGAACATTACATTCATTTAAAGGAAGGGACCAACCCCACAAAAGTTCGTCCATATAGGTATGTATATCATCAAAAGGCCAAGATGGAGAAATTAGTGG
AGGAAATTCTAGACTCGAGCATCATTAGACCGAGCATCAGCCCTTATTCTAGCCAT
Protein sequenceShow/hide protein sequence
LAAEQGEYNEVELVPESLSDLLNQFQDVFEWLRELPPRQNIEHYIHLKEGTNPTKVRPYRYVYHQKAKMEKLVEEILDSSIIRPSISPYSSH