; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi08G001066 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001066
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionHistone H2A
Genome locationchr8:39199601..39199814
RNA-Seq ExpressionBhi08G001066
SyntenyBhi08G001066
Gene Ontology termsGO:0031507 - heterochromatin assembly (biological process)
GO:0000775 - chromosome, centromeric region (cellular component)
GO:0000786 - nucleosome (cellular component)
GO:0000792 - heterochromatin (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR002119 - Histone H2A
IPR009072 - Histone-fold
IPR032454 - Histone H2A, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448380.1 PREDICTED: histone H2A [Cucumis melo]3.4e-2183.1Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN +LLPKKTDK TKE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

XP_022947502.1 histone H2A-like [Cucurbita moschata]3.4e-2184.51Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN ILLPKKTDKA KE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

XP_023006960.1 histone H2A-like [Cucurbita maxima]3.4e-2184.51Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN ILLPKKTDKA KE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

XP_023532320.1 histone H2A-like [Cucurbita pepo subsp. pepo]3.4e-2184.51Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN ILLPKKTDKA KE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

XP_038900828.1 histone H2A-like [Benincasa hispida]5.3e-2285.92Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNKR RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN +LLPKKTDKATKE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

TrEMBL top hitse value%identityAlignment
A0A061GY51 Histone H2A2.8e-2181.69Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLA+RNDEEL KLLA +TI  G VLPNIN +LLPKKTDKATKE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

A0A1S3BK65 Histone H2A1.7e-2183.1Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN +LLPKKTDK TKE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

A0A6A4M3D2 Histone H2A (Fragment)2.2e-2183.1Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI  G VLPNIN +LLPKKTDKATKE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

A0A6J1G6M6 Histone H2A1.7e-2184.51Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN ILLPKKTDKA KE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

A0A6J1L1N2 Histone H2A1.7e-2184.51Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI SG VLPNIN ILLPKKTDKA KE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

SwissProt top hitse value%identityAlignment
A2WQG7 Probable histone H2A.58.8e-2073.33Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDK----ATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI  G VLPNIN +LLPKKT +    A KE KSP K
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDK----ATKELKSPSK

P19177 Histone H2A1.8e-2075Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKT-DKATKELKSPSK
        VLELA NAARDNK+ RIIPRH+LLA+RNDEEL KLLA +T   G VLPNIN +LLPKKT +KA KE KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKT-DKATKELKSPSK

Q2HU68 Probable histone H2A.13.6e-2176.06Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLA+RNDEEL KLLA +TI  G VLPNIN ILLPKK +KA    KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

Q94E96 Probable histone H2A.58.8e-2073.33Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDK----ATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLAIRNDEEL KLLA +TI  G VLPNIN +LLPKKT +    A KE KSP K
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDK----ATKELKSPSK

Q9M531 Histone H2A1.0e-2073.33Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDK----ATKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLA+RNDEEL KLLA +TI  G VLPNIN +LLPKK +K    ATKE KSP+K
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDK----ATKELKSPSK

Arabidopsis top hitse value%identityAlignment
AT1G08880.1 Histone superfamily protein2.5e-1761.97Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK
        VLELA NAARDNK+ RI+PRH+ LA+RNDEEL KLL S+TI +G VLPNI+  LLP K  K   ++ S S+
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK

AT1G51060.1 histone H2A 102.5e-1769.49Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKT
        VLELA NAARDNK+ RI+PRH+ LA+RNDEEL KLL  +TI +G V+PNI+ +LLPKKT
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKT

AT5G02560.1 histone H2A 121.4e-2072.97Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKA---TKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLA+RNDEEL  LL  +TI  G VLPNIN ILLPKK++KA   TK  KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKA---TKELKSPSK

AT5G02560.2 histone H2A 121.4e-2072.97Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKA---TKELKSPSK
        VLELA NAARDNK+ RIIPRHVLLA+RNDEEL  LL  +TI  G VLPNIN ILLPKK++KA   TK  KSPSK
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKA---TKELKSPSK

AT5G59870.1 histone H2A 61.2e-1967.95Show/hide
Query:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKT------DKATKE-LKSPSK
        VLELA NAARDNK+ RIIPRH+LLAIRNDEEL KLL+ +TI  G VLPNIN +LLPKK+      +KATK  +KSP K
Subjt:  VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKT------DKATKE-LKSPSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCTAGAGTTAGCCGAAAATGCGGCGAGAGACAACAAGAGGAAAAGAATCATTCCAAGGCACGTTCTATTGGCGATTAGGAACGATGAAGAACTCGAAAAGTTGCTCGC
TAGCATAACTATTACTAGTGGCGACGTTCTTCCAAATATCAACCTGATTCTGTTGCCAAAAAAGACGGATAAGGCTACAAAAGAGCTTAAATCTCCATCGAAGG
mRNA sequenceShow/hide mRNA sequence
GTTCTAGAGTTAGCCGAAAATGCGGCGAGAGACAACAAGAGGAAAAGAATCATTCCAAGGCACGTTCTATTGGCGATTAGGAACGATGAAGAACTCGAAAAGTTGCTCGC
TAGCATAACTATTACTAGTGGCGACGTTCTTCCAAATATCAACCTGATTCTGTTGCCAAAAAAGACGGATAAGGCTACAAAAGAGCTTAAATCTCCATCGAAGG
Protein sequenceShow/hide protein sequence
VLELAENAARDNKRKRIIPRHVLLAIRNDEELEKLLASITITSGDVLPNINLILLPKKTDKATKELKSPSK