; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi08G001460 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001460
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionRNA pseudouridine synthase 6, chloroplastic-like
Genome locationchr8:51681420..51685870
RNA-Seq ExpressionBhi08G001460
SyntenyBhi08G001460
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441331.1 PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X3 [Cucumis melo]5.3e-22092.71Show/hide
Query:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF
        MGILNIIVCFHV HS+  HELNI SFWKGDL WNTSLN WIFLLYLIHFGAVYYALVCPQP PTA+ EE RLFKKFT+PSFL GR SIKGKTLREAQ TF
Subjt:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF

Query:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
        RITHIDEFVEVG YLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
Subjt:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE

Query:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG
        YCSIFHRKIREKKVMKLYLALAA P+P GI+THYMRP+NLAPRLVS D IDGWNLCQLEVLECREVSWPDADIEAKY IEDCGWPSKKKAFECKINLLTG
Subjt:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG

Query:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        RTHQIRAQLAD GAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKE AVAEWIA HGKEPAVAIGLQAYEISWDSGKHIYNAGTPWW+ EQL
Subjt:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

XP_016903527.1 PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2 [Cucumis melo]1.5e-21992.7Show/hide
Query:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
        GILNIIVCFHV HS+  HELNI SFWKGDL WNTSLN WIFLLYLIHFGAVYYALVCPQP PTA+ EE RLFKKFT+PSFL GR SIKGKTLREAQ TFR
Subjt:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR

Query:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
        ITHIDEFVEVG YLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
Subjt:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY

Query:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
        CSIFHRKIREKKVMKLYLALAA P+P GI+THYMRP+NLAPRLVS D IDGWNLCQLEVLECREVSWPDADIEAKY IEDCGWPSKKKAFECKINLLTGR
Subjt:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR

Query:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        THQIRAQLAD GAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKE AVAEWIA HGKEPAVAIGLQAYEISWDSGKHIYNAGTPWW+ EQL
Subjt:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

XP_038894436.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X2 [Benincasa hispida]1.7e-239100Show/hide
Query:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
        GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
Subjt:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR

Query:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
        ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
Subjt:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY

Query:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
        CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
Subjt:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR

Query:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
Subjt:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

XP_038894438.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X3 [Benincasa hispida]1.6e-23297.98Show/hide
Query:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
        GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLL       +YYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
Subjt:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR

Query:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
        ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
Subjt:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY

Query:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
        CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
Subjt:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR

Query:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
Subjt:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

XP_038894439.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X4 [Benincasa hispida]6.0e-240100Show/hide
Query:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF
        MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF
Subjt:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF

Query:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
        RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
Subjt:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE

Query:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG
        YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG
Subjt:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG

Query:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
Subjt:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

TrEMBL top hitse value%identityAlignment
A0A1S3B376 RNA pseudouridine synthase 6, chloroplastic isoform X32.6e-22092.71Show/hide
Query:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF
        MGILNIIVCFHV HS+  HELNI SFWKGDL WNTSLN WIFLLYLIHFGAVYYALVCPQP PTA+ EE RLFKKFT+PSFL GR SIKGKTLREAQ TF
Subjt:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF

Query:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
        RITHIDEFVEVG YLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
Subjt:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE

Query:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG
        YCSIFHRKIREKKVMKLYLALAA P+P GI+THYMRP+NLAPRLVS D IDGWNLCQLEVLECREVSWPDADIEAKY IEDCGWPSKKKAFECKINLLTG
Subjt:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG

Query:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        RTHQIRAQLAD GAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKE AVAEWIA HGKEPAVAIGLQAYEISWDSGKHIYNAGTPWW+ EQL
Subjt:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

A0A1S3B3T1 RNA pseudouridine synthase 6, chloroplastic-like isoform X21.5e-21287.91Show/hide
Query:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
        GILNIIVCFH PH ++ HELNI SFWK DL WNTS+NHW FLLYLIHFGAVYYALVCPQP  TATPE+ RLFKKFTEPSFLKGR SIKGKT+REAQ TFR
Subjt:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR

Query:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
        ITH+DEFVEVG YLRV+VHPKRFPRCY+IDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE+C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
Subjt:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY

Query:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
        CSIFHRKIREK+VMK YLAL+AAP+PMGIITHYMRP+N+APRLVS+D IDGW LCQLEVLECREVSWPD DIEAKY  ED GWPSKKKA+ECKINLLTGR
Subjt:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR

Query:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        THQIRAQLADCGAPLVGDS+YMPA VAEM +PGLNPFGKCKKEYTSEEDKETAVAEWIA HGKEPAVAIGLQAYEISWDS +HIYNAGTPWW+ EQL
Subjt:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

A0A1S4E5N2 RNA pseudouridine synthase 6, chloroplastic isoform X27.4e-22092.7Show/hide
Query:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR
        GILNIIVCFHV HS+  HELNI SFWKGDL WNTSLN WIFLLYLIHFGAVYYALVCPQP PTA+ EE RLFKKFT+PSFL GR SIKGKTLREAQ TFR
Subjt:  GILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFR

Query:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
        ITHIDEFVEVG YLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY
Subjt:  ITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEY

Query:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR
        CSIFHRKIREKKVMKLYLALAA P+P GI+THYMRP+NLAPRLVS D IDGWNLCQLEVLECREVSWPDADIEAKY IEDCGWPSKKKAFECKINLLTGR
Subjt:  CSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGR

Query:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        THQIRAQLAD GAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKE AVAEWIA HGKEPAVAIGLQAYEISWDSGKHIYNAGTPWW+ EQL
Subjt:  THQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

A0A6J1EYD9 RNA pseudouridine synthase 6, chloroplastic-like isoform X27.2e-21590.2Show/hide
Query:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF
        MGILNIIVCFHVPHS + HELNI SFWK  L WNTSLN WIFLLYLIHFGAV+YALVCP+P PTATPE+ RLFKKFTEP+FLKGR SIKGKT+ EAQ TF
Subjt:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF

Query:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
        RIT ID+FVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
Subjt:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE

Query:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG
        YCSIFHRKIREKKVMKLYLALAAAP+PMGIITHYMRP+NLAPRLVS+D IDGWNLCQLEVLECREVSWP ADIEAKY IEDCGWPSKKKA+ECKINLLTG
Subjt:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG

Query:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPG NPFG+ KKEYTSEEDKE AVAEWIA HGKEPA+AIGLQAYEISWDSG+H YNAGTPWW   QL
Subjt:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

A0A6J1KI44 RNA pseudouridine synthase 6, chloroplastic-like isoform X28.5e-21689.95Show/hide
Query:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF
        MGILNIIVCFHVPHS + HELNI  FWK DL WNTSLN WIFLLYLIHFGAV+YALVCP+P PTATPE+ RLFKKFTEP+FLKGR SIKGKT+ EAQ TF
Subjt:  MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTF

Query:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
        RITHID+FVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTNN+EETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE
Subjt:  RITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKE

Query:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG
        YCSIFHRKIREKKVMKLYLALAAAP+PMGIITHYMRP+NLAPR+VS+D IDGWNLCQLEVLECREVSWP ADIEAKY IEDCGWPSKKKA+ECKINLLTG
Subjt:  YCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTG

Query:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL
        RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPG NPFG+ KKEYTSEEDKE AVAEWIA HGKEPA+AIGLQAYEISWDSG+H YNAGTPWW   QL
Subjt:  RTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL

SwissProt top hitse value%identityAlignment
A3BN26 RNA pseudouridine synthase 6, chloroplastic8.1e-13964.04Show/hide
Query:  IFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT
        +++  LI FGAVYYALV PQP P A PE  R+F++ TEPS L  R SIKGKT+REAQ TFR+T  ++ +E G YLRV+VHPKRFPRCYEIDWKSR+IAVT
Subjt:  IFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT

Query:  DSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNL
        D+YVVLDKPA TSVGG T+NIEE+CV F +RALGL +PL TTHQIDNC+EGCV+L++TKE+CS+FH  IREK+V K YLAL  AP+  GIITHYMRP+N 
Subjt:  DSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNL

Query:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGK
        APRLVSED I GW++CQ+E+L+C++V WP + I   + +++CGWP ++ A+ECKINLLTG+THQIRAQLA  G P+VGDS YM AA+A + NP +NPFG+
Subjt:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGK

Query:  CKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWD--SGKHIYNAGTPWWK
          + Y SE++K  AV  WI+ HGKEP   IGLQA EISWD     H Y AG PWW+
Subjt:  CKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWD--SGKHIYNAGTPWWK

P43930 Uncharacterized RNA pseudouridine synthase HI_00425.6e-0725.82Show/hide
Query:  YVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALA--AAPIPMGIITHYMRPVNL
        +++++K  G SV    +  E+       + L +   +W  H++D  T G +ILA   E  + F R   E K+ K YLAL+        G+I   M+    
Subjt:  YVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALA--AAPIPMGIITHYMRPVNL

Query:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIY
                    W LCQ +            D  A    E        + F  K    TG+THQ+R  +   G+P++GD +Y
Subjt:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIY

P53294 tRNA pseudouridine(31) synthase5.6e-0725.93Show/hide
Query:  IIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMG-IITHY
        I+   +S +V+DKP+G  V  T    + T +T   +  G+ +     +++D  T G +ILA+  +      + IR + ++K+YLA      P   +I   
Subjt:  IIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMG-IITHY

Query:  MRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDA-DIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIY
                   S+  ++   +  ++      V    + D   K+Y       + +    CK   +TGRTHQIR  LA  G P+V DS+Y
Subjt:  MRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDA-DIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIY

Q8PHN2 Ribosomal large subunit pseudouridine synthase D3.3e-0725.95Show/hide
Query:  DSYVVLDKPAGTSVGGTTNNIEETCVT---FATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRP
        +  +V+DKPAG  V     N + T V    F   AL         H++D  T G +++ART +  +    ++  ++V + YLA+    +  G   +   P
Subjt:  DSYVVLDKPAGTSVGGTTNNIEETCVT---FATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRP

Query:  VNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIY
        ++  PR          +  ++ V +         D    Y + +        A EC++   TGRTHQIR  +A   +P+VGD +Y
Subjt:  VNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIY

Q9SVS0 RNA pseudouridine synthase 6, chloroplastic3.9e-15772.55Show/hide
Query:  IFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT
        +++  LI FGAV+YALVCP+P PTATPEE  LF++ T PS LK R SIKGKT+REAQ TFR+TH +++ E G YLRV+VHPKR PRCYEIDWKSRI+AVT
Subjt:  IFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT

Query:  DSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNL
        DSYV+LDKPAGT+VGGTT+NIEE+C TFA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K+V KLY ALAAAP+P+GII+HYMRP N+
Subjt:  DSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNL

Query:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGK
        APRLV+ED I GW+LCQLEVLEC+++ WPDA  E K+ IEDCGW SK+ A+EC INLLTG+THQIRAQLA CGAPLVGDS+YMPAA+AEM NP  NP+GK
Subjt:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGK

Query:  CKKEYTSEED-KETAVAEWIAQHGKEPAVAIGLQAYEISW--DSGKHIYNAGTPWWK
         KK YT EE+ KETAVAEWI +HGKEP V IGLQA +ISW  D G+H Y AGTPWW+
Subjt:  CKKEYTSEED-KETAVAEWIAQHGKEPAVAIGLQAYEISW--DSGKHIYNAGTPWWK

Arabidopsis top hitse value%identityAlignment
AT4G21770.1 Pseudouridine synthase family protein2.8e-15872.55Show/hide
Query:  IFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT
        +++  LI FGAV+YALVCP+P PTATPEE  LF++ T PS LK R SIKGKT+REAQ TFR+TH +++ E G YLRV+VHPKR PRCYEIDWKSRI+AVT
Subjt:  IFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVT

Query:  DSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNL
        DSYV+LDKPAGT+VGGTT+NIEE+C TFA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K+V KLY ALAAAP+P+GII+HYMRP N+
Subjt:  DSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAAPIPMGIITHYMRPVNL

Query:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGK
        APRLV+ED I GW+LCQLEVLEC+++ WPDA  E K+ IEDCGW SK+ A+EC INLLTG+THQIRAQLA CGAPLVGDS+YMPAA+AEM NP  NP+GK
Subjt:  APRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGK

Query:  CKKEYTSEED-KETAVAEWIAQHGKEPAVAIGLQAYEISW--DSGKHIYNAGTPWWK
         KK YT EE+ KETAVAEWI +HGKEP V IGLQA +ISW  D G+H Y AGTPWW+
Subjt:  CKKEYTSEED-KETAVAEWIAQHGKEPAVAIGLQAYEISW--DSGKHIYNAGTPWWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATCCTCAATATCATCGTTTGCTTCCATGTCCCTCATTCAATAGACACACACGAGTTGAACATCTTGTCGTTTTGGAAAGGGGACCTGTTCTGGAATACA
TCTCTAAATCATTGGATCTTCCTCCTTTATCTCATTCATTTTGGTGCAGTATATTATGCTCTAGTATGCCCACAGCCCGCGCCAACTGCAACCCCCGAGGAATTT
AGACTATTCAAAAAATTTACTGAACCATCATTTTTGAAAGGGCGAATATCTATCAAAGGGAAAACTTTGAGAGAAGCTCAGAATACTTTCCGGATAACTCATATT
GACGAGTTTGTGGAAGTTGGAATGTACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGCTATGAAATTGATTGGAAATCAAGAATTATCGCTGTGACA
GATTCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGTGGCACTACTAACAACATCGAAGAGACTTGTGTAACGTTTGCAACTCGTGCTTTAGGATTA
ACATCTCCCTTGTGGACTACCCATCAGATTGACAACTGCACTGAGGGCTGCGTCATTCTAGCTAGGACAAAAGAGTATTGCTCCATCTTCCATCGTAAAATCAGA
GAGAAAAAGGTTATGAAGCTTTATCTTGCTCTTGCTGCTGCTCCCATACCAATGGGAATAATAACACACTATATGCGGCCAGTTAATTTGGCTCCTAGACTCGTT
TCAGAAGATTTTATTGATGGATGGAACTTGTGTCAGCTTGAGGTGTTGGAGTGCAGAGAGGTTTCATGGCCAGATGCTGATATTGAAGCAAAATACTATATTGAA
GATTGTGGGTGGCCCTCCAAAAAGAAAGCATTTGAATGTAAAATCAACCTCTTGACTGGTCGGACGCATCAGATTCGAGCACAACTGGCTGATTGTGGAGCACCG
TTGGTTGGTGATTCCATCTACATGCCTGCAGCAGTTGCAGAGATGGCTAATCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACAAGCGAAGAAGAT
AAAGAAACTGCAGTGGCAGAGTGGATTGCTCAGCACGGAAAAGAACCGGCTGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGGGGAAGCACATT
TACAATGCTGGGACTCCTTGGTGGAAGCTGGAACAGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATCCTCAATATCATCGTTTGCTTCCATGTCCCTCATTCAATAGACACACACGAGTTGAACATCTTGTCGTTTTGGAAAGGGGACCTGTTCTGGAATACA
TCTCTAAATCATTGGATCTTCCTCCTTTATCTCATTCATTTTGGTGCAGTATATTATGCTCTAGTATGCCCACAGCCCGCGCCAACTGCAACCCCCGAGGAATTT
AGACTATTCAAAAAATTTACTGAACCATCATTTTTGAAAGGGCGAATATCTATCAAAGGGAAAACTTTGAGAGAAGCTCAGAATACTTTCCGGATAACTCATATT
GACGAGTTTGTGGAAGTTGGAATGTACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGCTATGAAATTGATTGGAAATCAAGAATTATCGCTGTGACA
GATTCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGTGGCACTACTAACAACATCGAAGAGACTTGTGTAACGTTTGCAACTCGTGCTTTAGGATTA
ACATCTCCCTTGTGGACTACCCATCAGATTGACAACTGCACTGAGGGCTGCGTCATTCTAGCTAGGACAAAAGAGTATTGCTCCATCTTCCATCGTAAAATCAGA
GAGAAAAAGGTTATGAAGCTTTATCTTGCTCTTGCTGCTGCTCCCATACCAATGGGAATAATAACACACTATATGCGGCCAGTTAATTTGGCTCCTAGACTCGTT
TCAGAAGATTTTATTGATGGATGGAACTTGTGTCAGCTTGAGGTGTTGGAGTGCAGAGAGGTTTCATGGCCAGATGCTGATATTGAAGCAAAATACTATATTGAA
GATTGTGGGTGGCCCTCCAAAAAGAAAGCATTTGAATGTAAAATCAACCTCTTGACTGGTCGGACGCATCAGATTCGAGCACAACTGGCTGATTGTGGAGCACCG
TTGGTTGGTGATTCCATCTACATGCCTGCAGCAGTTGCAGAGATGGCTAATCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACAAGCGAAGAAGAT
AAAGAAACTGCAGTGGCAGAGTGGATTGCTCAGCACGGAAAAGAACCGGCTGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGGGGAAGCACATT
TACAATGCTGGGACTCCTTGGTGGAAGCTGGAACAGTTATAG
Protein sequenceShow/hide protein sequence
MGILNIIVCFHVPHSIDTHELNILSFWKGDLFWNTSLNHWIFLLYLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRITHI
DEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIR
EKKVMKLYLALAAAPIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAP
LVGDSIYMPAAVAEMANPGLNPFGKCKKEYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL