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Bhi08G001484 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001484
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionRING-type domain-containing protein
Genome locationchr8:52607946..52608322
RNA-Seq ExpressionBhi08G001484
SyntenyBhi08G001484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96112.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]8.7e-2666.36Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL----------------AEPSSSREP----TYKDKTGRRAKRALKREATDKAAATKHQEH
        +PEDDQYY YEDD+EELEDAYLG SPSL+I NRRWG+NGY+                  PSSSR+P      KDKTGRRAKRALKREA DKAAA KHQEH
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL----------------AEPSSSREP----TYKDKTGRRAKRALKREATDKAAATKHQEH

Query:  LARFGWK
        LARFG K
Subjt:  LARFGWK

XP_004140197.1 uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus]9.3e-2869.16Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------AEPSSSREP-----TYKDKTGRRAKRALKREATDKAAATKHQEH
        DPEDDQYYPYEDD+EELEDAYLG SPSL+I NRRWG+NGY+                 PSSSREP     + KDKTGRRAKRALKREA DKAAA KHQEH
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------AEPSSSREP-----TYKDKTGRRAKRALKREATDKAAATKHQEH

Query:  LARFGWK
        LARFG K
Subjt:  LARFGWK

XP_011657615.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]9.3e-2869.16Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------AEPSSSREP-----TYKDKTGRRAKRALKREATDKAAATKHQEH
        DPEDDQYYPYEDD+EELEDAYLG SPSL+I NRRWG+NGY+                 PSSSREP     + KDKTGRRAKRALKREA DKAAA KHQEH
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------AEPSSSREP-----TYKDKTGRRAKRALKREATDKAAATKHQEH

Query:  LARFGWK
        LARFG K
Subjt:  LARFGWK

XP_038901112.1 uncharacterized protein LOC120088112 isoform X1 [Benincasa hispida]6.2e-3276.47Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGY---------------LAEPSSSREPTYKDKTGRRAKRALKREATDKAAATKHQEHLARFG
        DPEDD+YYPYEDD+EELEDAYLGVSP+L+I NRRWGFNGY               LAEPSSSREPT KDKTGRRAKRALKREA DKAAA KHQEHLARFG
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGY---------------LAEPSSSREPTYKDKTGRRAKRALKREATDKAAATKHQEHLARFG

Query:  WK
         K
Subjt:  WK

XP_038901113.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida]6.2e-3276.47Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGY---------------LAEPSSSREPTYKDKTGRRAKRALKREATDKAAATKHQEHLARFG
        DPEDD+YYPYEDD+EELEDAYLGVSP+L+I NRRWGFNGY               LAEPSSSREPT KDKTGRRAKRALKREA DKAAA KHQEHLARFG
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGY---------------LAEPSSSREPTYKDKTGRRAKRALKREATDKAAATKHQEHLARFG

Query:  WK
         K
Subjt:  WK

TrEMBL top hitse value%identityAlignment
A0A0A0KK15 RING-type domain-containing protein4.5e-2869.16Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------AEPSSSREP-----TYKDKTGRRAKRALKREATDKAAATKHQEH
        DPEDDQYYPYEDD+EELEDAYLG SPSL+I NRRWG+NGY+                 PSSSREP     + KDKTGRRAKRALKREA DKAAA KHQEH
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------AEPSSSREP-----TYKDKTGRRAKRALKREATDKAAATKHQEH

Query:  LARFGWK
        LARFG K
Subjt:  LARFGWK

A0A1S4DXR5 uncharacterized protein LOC1034914765.1e-2465.69Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL----------------AEPSSSREP----TYKDKTGRRAKRALKREATDKAAATKHQEH
        +PEDDQYY YEDD+EELEDAYLG SPSL+I NRRWG+NGY+                  PSSSR+P      KDKTGRRAKRALKREA DKAAA KHQEH
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL----------------AEPSSSREP----TYKDKTGRRAKRALKREATDKAAATKHQEH

Query:  LA
        LA
Subjt:  LA

A0A5D3B8D7 E3 ubiquitin-protein ligase RNF13 isoform X24.2e-2666.36Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL----------------AEPSSSREP----TYKDKTGRRAKRALKREATDKAAATKHQEH
        +PEDDQYY YEDD+EELEDAYLG SPSL+I NRRWG+NGY+                  PSSSR+P      KDKTGRRAKRALKREA DKAAA KHQEH
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL----------------AEPSSSREP----TYKDKTGRRAKRALKREATDKAAATKHQEH

Query:  LARFGWK
        LARFG K
Subjt:  LARFGWK

A0A6J1FXD4 uncharacterized protein LOC1114484312.6e-2367.31Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP---------SSSREPT----YKDKTGRRAKRALKREATDKAAATKHQEHL
        DPE  +YYPYED +EELE+AYLG SPSL+I NRRWG NGY+      A P         SSSREPT     KDKTGRRAKRALKREA DKAAA KHQEHL
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP---------SSSREPT----YKDKTGRRAKRALKREATDKAAATKHQEHL

Query:  ARFG
        ARFG
Subjt:  ARFG

A0A6J1JFP2 uncharacterized protein LOC1114845975.7e-2367.31Show/hide
Query:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP---------SSSREPT----YKDKTGRRAKRALKREATDKAAATKHQEHL
        DPE  +YYPYED +EELE+AYLG SPSL+I NRRWG NGY+      A P         SSSREPT     KDKTGRRAKRALKREA DKAAA KHQEHL
Subjt:  DPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP---------SSSREPT----YKDKTGRRAKRALKREATDKAAATKHQEHL

Query:  ARFG
        ARFG
Subjt:  ARFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12310.1 RING/U-box superfamily protein3.9e-0837.5Show/hide
Query:  QYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------------AEPSSS-----REPTYKDKTGRRAKRALKREATDKA----AAT
        +Y   ++D+++L++ Y+  S SL++ NRRWG NG++                     +EP+SS     +E T    TGRRAKRA+KREA +KA    AA 
Subjt:  QYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL---------------------AEPSSS-----REPTYKDKTGRRAKRALKREATDKA----AAT

Query:  KHQEHLARFGWK
        KH+  L R G K
Subjt:  KHQEHLARFGWK

AT5G19430.1 RING/U-box superfamily protein4.9e-1144.14Show/hide
Query:  YPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP----------------SSSREPTYK-----DKTGRRAKRALKREATDKA----AATK
        Y YED++++L++ YL  S SL+I NRRWG NG++      A P                SSS EP  K     + TGRRAKRA+KREA +KA    AA K
Subjt:  YPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP----------------SSSREPTYK-----DKTGRRAKRALKREATDKA----AATK

Query:  HQEHLARFGWK
        H+ HL R G K
Subjt:  HQEHLARFGWK

AT5G19430.2 RING/U-box superfamily protein4.9e-1144.14Show/hide
Query:  YPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP----------------SSSREPTYK-----DKTGRRAKRALKREATDKA----AATK
        Y YED++++L++ YL  S SL+I NRRWG NG++      A P                SSS EP  K     + TGRRAKRA+KREA +KA    AA K
Subjt:  YPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYL------AEP----------------SSSREPTYK-----DKTGRRAKRALKREATDKA----AATK

Query:  HQEHLARFGWK
        H+ HL R G K
Subjt:  HQEHLARFGWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTCTGAGAGCTTCGTGAACGGGAGGAAACCTATGATGGATCCTGAGGATGATCAATACTATCCTTATGAGGATGACAATGAAGAGTTGGAGGATGCT
TACCTGGGTGTATCACCAAGTCTCCAAATTAGAAATCGAAGGTGGGGATTCAATGGTTACTTGGCCGAACCTAGTTCATCGAGGGAGCCCACTTACAAAGATAAA
ACAGGTCGACGAGCTAAAAGGGCCTTGAAACGAGAAGCTACGGATAAAGCAGCAGCAACTAAGCATCAAGAACATCTAGCTAGGTTTGGCTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTTCTGAGAGCTTCGTGAACGGGAGGAAACCTATGATGGATCCTGAGGATGATCAATACTATCCTTATGAGGATGACAATGAAGAGTTGGAGGATGCT
TACCTGGGTGTATCACCAAGTCTCCAAATTAGAAATCGAAGGTGGGGATTCAATGGTTACTTGGCCGAACCTAGTTCATCGAGGGAGCCCACTTACAAAGATAAA
ACAGGTCGACGAGCTAAAAGGGCCTTGAAACGAGAAGCTACGGATAAAGCAGCAGCAACTAAGCATCAAGAACATCTAGCTAGGTTTGGCTGGAAGTGA
Protein sequenceShow/hide protein sequence
MSVSESFVNGRKPMMDPEDDQYYPYEDDNEELEDAYLGVSPSLQIRNRRWGFNGYLAEPSSSREPTYKDKTGRRAKRALKREATDKAAATKHQEHLARFGWK