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Bhi08G001609 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001609
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionReverse transcriptase
Genome locationchr8:57252659..57253027
RNA-Seq ExpressionBhi08G001609
SyntenyBhi08G001609
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A1R3K499 Reverse transcriptase7.1e-0430.38Show/hide
Query:  FKLNTNGAWCLSTSPSNCGAIIHNSEGAIIVTFGCKLNLLQSPLQAELVALSFSLLNVNSIGYQNIIIGEDSLLTLKPI
        FK+NT+ ++ LS+  +  GA++ +S+G+++++   ++N +  PL AE+ A+ F L+    +G Q+  +  DS+L ++ I
Subjt:  FKLNTNGAWCLSTSPSNCGAIIHNSEGAIIVTFGCKLNLLQSPLQAELVALSFSLLNVNSIGYQNIIIGEDSLLTLKPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCCAAAGCAAGTTAGATCATTTCATATATTGGAGAATTTCAAAAGATCTGATCTTCTCACAAACATACCAAGAACACTCAGCAAGACATTATATCTTCGTGGA
CTCCGCCTTCACATGGTTTTTTTCAAATTAAACACAAATGGTGCTTGGTGTCTTTCAACCTCTCCATCTAACTGTGGAGCTATTATTCATAACTCTGAAGGAGCC
ATTATTGTAACTTTTGGTTGTAAATTGAATCTTCTTCAAAGCCCATTGCAAGCAGAACTTGTAGCTCTCTCATTTAGTCTCTTAAATGTAAATTCCATTGGCTAC
CAAAACATAATCATTGGAGAAGATTCATTATTAACACTCAAACCCATTAAATAA
mRNA sequenceShow/hide mRNA sequence
CTTCCAAAGCAAGTTAGATCATTTCATATATTGGAGAATTTCAAAAGATCTGATCTTCTCACAAACATACCAAGAACACTCAGCAAGACATTATATCTTCGTGGA
CTCCGCCTTCACATGGTTTTTTTCAAATTAAACACAAATGGTGCTTGGTGTCTTTCAACCTCTCCATCTAACTGTGGAGCTATTATTCATAACTCTGAAGGAGCC
ATTATTGTAACTTTTGGTTGTAAATTGAATCTTCTTCAAAGCCCATTGCAAGCAGAACTTGTAGCTCTCTCATTTAGTCTCTTAAATGTAAATTCCATTGGCTAC
CAAAACATAATCATTGGAGAAGATTCATTATTAACACTCAAACCCATTAAATAA
Protein sequenceShow/hide protein sequence
LPKQVRSFHILENFKRSDLLTNIPRTLSKTLYLRGLRLHMVFFKLNTNGAWCLSTSPSNCGAIIHNSEGAIIVTFGCKLNLLQSPLQAELVALSFSLLNVNSIGY
QNIIIGEDSLLTLKPIK