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Bhi08G001685 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001685
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionRibonuclease H
Genome locationchr8:59578731..59579212
RNA-Seq ExpressionBhi08G001685
SyntenyBhi08G001685
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.9e-2046.21Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E L  ++    YD+SL C +H GAKGH ++QC  FR  V+EL DS+ L+V+    K+     E   V E    E +   LK K L IFY EKP+
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          N + KPITI V +PFEYKSSKA+PW YE K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]7.7e-2251.3Show/hide
Query:  YDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPNTTNSNPKPITIQVLSPF
        YD+SL C +H GAKGH ++QC  FR KV+EL DS+ L+ +    K+       +VVE+IL  E +   LK KPL IFYREKP+  + + KP  I V  PF
Subjt:  YDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPNTTNSNPKPITIQVLSPF

Query:  EYKSSKALPWNYEYK
        EYKSSKA+PW YE K
Subjt:  EYKSSKALPWNYEYK

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]6.3e-2445.45Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E+L  D+   +YD++L C YH GA+GH ++QC  F++KV+EL D + L     TV Q   E  +DVVE +   E +    K KPL + YREKP 
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          +++ +PITIQV +PFEY SSKA+PW YE K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.5e-2246.21Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E L  ++   +YD+SL C +H GAKGH ++QC  FR KV+EL DS+ L+V+     Q++G   ++VVE++   E +   LK K L IFY EKP+
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          + + KPITI V +PFEYKSSKA+PW Y+ K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]5.3e-2346.97Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E L  ++    YD+SL C +H GAKGH ++QC  FR KV+EL DS+ L+V+     Q++G   +++VE++   E +   LK K L IFY EKPN
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          N + KPITI V +PFEYKSSKA+PW Y+ K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H9.1e-2146.21Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E L  ++    YD+SL C +H GAKGH ++QC  FR  V+EL DS+ L+V+    K+     E   V E    E +   LK K L IFY EKP+
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          N + KPITI V +PFEYKSSKA+PW YE K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

A0A6J1D099 Ribonuclease H3.7e-2251.3Show/hide
Query:  YDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPNTTNSNPKPITIQVLSPF
        YD+SL C +H GAKGH ++QC  FR KV+EL DS+ L+ +    K+       +VVE+IL  E +   LK KPL IFYREKP+  + + KP  I V  PF
Subjt:  YDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPNTTNSNPKPITIQVLSPF

Query:  EYKSSKALPWNYEYK
        EYKSSKA+PW YE K
Subjt:  EYKSSKALPWNYEYK

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222313.0e-2445.45Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E+L  D+   +YD++L C YH GA+GH ++QC  F++KV+EL D + L     TV Q   E  +DVVE +   E +    K KPL + YREKP 
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          +++ +PITIQV +PFEY SSKA+PW YE K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

A0A6J1DZ90 Ribonuclease H7.5e-2346.21Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E L  ++   +YD+SL C +H GAKGH ++QC  FR KV+EL DS+ L+V+     Q++G   ++VVE++   E +   LK K L IFY EKP+
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          + + KPITI V +PFEYKSSKA+PW Y+ K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

A0A6J1E2J7 Ribonuclease H2.6e-2346.97Show/hide
Query:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN
        +G +  E L  ++    YD+SL C +H GAKGH ++QC  FR KV+EL DS+ L+V+     Q++G   +++VE++   E +   LK K L IFY EKPN
Subjt:  NGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPN

Query:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK
          N + KPITI V +PFEYKSSKA+PW Y+ K
Subjt:  TTNSNPKPITIQVLSPFEYKSSKALPWNYEYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAATGGATTGATCAAACAAGAGAATTTACAGGTTGATGTCTCTAATAACAAATATGATGACAGTTTGATATGTTTGTATCATGTTGGGGCAAAAGGCCACTTTAT
TGATCAGTGTCCCCATTTTCGCCAAAAGGTGAAAGAGTTATCAGATTCTCGTTTCTTATCAGTATCCCAAAAGACAGTAAAACAACAAGAGGGTGAGTATGAAGTAGACG
TTGTAGAAGAGATCTTAGAATGTGAATGCACGCAAATTTTTCTAAAGCAAAAACCATTAGCGATCTTCTACCGAGAGAAGCCTAATACCACCAATTCCAATCCAAAACCA
ATTACCATACAGGTTTTGTCTCCCTTCGAGTATAAAAGCTCAAAAGCATTACCATGGAATTATGAGTACAAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTAATGGATTGATCAAACAAGAGAATTTACAGGTTGATGTCTCTAATAACAAATATGATGACAGTTTGATATGTTTGTATCATGTTGGGGCAAAAGGCCACTTTAT
TGATCAGTGTCCCCATTTTCGCCAAAAGGTGAAAGAGTTATCAGATTCTCGTTTCTTATCAGTATCCCAAAAGACAGTAAAACAACAAGAGGGTGAGTATGAAGTAGACG
TTGTAGAAGAGATCTTAGAATGTGAATGCACGCAAATTTTTCTAAAGCAAAAACCATTAGCGATCTTCTACCGAGAGAAGCCTAATACCACCAATTCCAATCCAAAACCA
ATTACCATACAGGTTTTGTCTCCCTTCGAGTATAAAAGCTCAAAAGCATTACCATGGAATTATGAGTACAAG
Protein sequenceShow/hide protein sequence
MFNGLIKQENLQVDVSNNKYDDSLICLYHVGAKGHFIDQCPHFRQKVKELSDSRFLSVSQKTVKQQEGEYEVDVVEEILECECTQIFLKQKPLAIFYREKPNTTNSNPKP
ITIQVLSPFEYKSSKALPWNYEYK