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Bhi08G001735 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001735
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionPhytochrome
Genome locationchr8:60997559..60997720
RNA-Seq ExpressionBhi08G001735
SyntenyBhi08G001735
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0009584 - detection of visible light (biological process)
GO:0009585 - red, far-red light phototransduction (biological process)
GO:0010105 - negative regulation of ethylene-activated signaling pathway (biological process)
GO:0017006 - protein-tetrapyrrole linkage (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0000155 - phosphorelay sensor kinase activity (molecular function)
GO:0009881 - photoreceptor activity (molecular function)
GO:0042803 - protein homodimerization activity (molecular function)
GO:0051740 - ethylene binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147430.1 phytochrome E isoform X1 [Cucumis sativus]2.9e-0977.78Show/hide
Query:  MTTFSSSADSNTRA-RPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSADSNTRA  P TTTS+DN+L AL QY+ DAGLLNKFELSDAS ESFN
Subjt:  MTTFSSSADSNTRA-RPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
XP_022927449.1 phytochrome E-like [Cucurbita moschata]3.8e-0973.58Show/hide
Query:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSA+SNTRARPS T S+DN+  AL QY+ DAGLLNKFE SDAS ESFN
Subjt:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
XP_023519751.1 phytochrome E-like [Cucurbita pepo subsp. pepo]3.8e-0973.58Show/hide
Query:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSA+SNTRARPS T S+DN+  AL QY+ DAGLLNKFE SDAS ESFN
Subjt:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
XP_031740457.1 phytochrome E isoform X2 [Cucumis sativus]2.9e-0977.78Show/hide
Query:  MTTFSSSADSNTRA-RPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSADSNTRA  P TTTS+DN+L AL QY+ DAGLLNKFELSDAS ESFN
Subjt:  MTTFSSSADSNTRA-RPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
XP_038894168.1 phytochrome E [Benincasa hispida]7.7e-1077.78Show/hide
Query:  MTTFSSSADSNTRARPSTTT-SSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSADSNTRARP+TTT S+DN+L AL QY+ DAGLLN+FELSDAS ESFN
Subjt:  MTTFSSSADSNTRARPSTTT-SSDNKLEALDQYDIDAGLLNKFELSDASCESFN
TrEMBL top hitse value%identityAlignment
A0A0A0LX39 Uncharacterized protein1.4e-0977.78Show/hide
Query:  MTTFSSSADSNTRA-RPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSADSNTRA  P TTTS+DN+L AL QY+ DAGLLNKFELSDAS ESFN
Subjt:  MTTFSSSADSNTRA-RPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
A0A1S3B972 Phytochrome5.4e-0977.55Show/hide
Query:  SSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        SSSADSNTRA P T+TS+D +L AL QY++DAGLLNKFELSDAS ESFN
Subjt:  SSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
A0A5D3DAS5 Phytochrome E5.4e-0977.55Show/hide
Query:  SSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        SSSADSNTRA P T+TS+D +L AL QY++DAGLLNKFELSDAS ESFN
Subjt:  SSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
A0A6J1EI12 Phytochrome1.9e-0973.58Show/hide
Query:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSA+SNTRARPS T S+DN+  AL QY+ DAGLLNKFE SDAS ESFN
Subjt:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
A0A6J1KGC9 Phytochrome4.6e-0869.81Show/hide
Query:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
        M  FSSSA+SN RARPS T S+DN+  AL QY+ DAGLLNKFE SDA  ESFN
Subjt:  MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGTTTTCTTCTTCGGCGGATAGCAATACTAGGGCTCGTCCTAGCACCACCACTAGCAGCGACAACAAACTTGAGGCACTTGATCAATATGATATTGAT
GCTGGACTTTTGAACAAGTTTGAGCTCTCGGATGCTTCTTGTGAGTCTTTTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGACGTTTTCTTCTTCGGCGGATAGCAATACTAGGGCTCGTCCTAGCACCACCACTAGCAGCGACAACAAACTTGAGGCACTTGATCAATATGATATTGAT
GCTGGACTTTTGAACAAGTTTGAGCTCTCGGATGCTTCTTGTGAGTCTTTTAACTAG
Protein sequenceShow/hide protein sequence
MTTFSSSADSNTRARPSTTTSSDNKLEALDQYDIDAGLLNKFELSDASCESFN