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Bhi08G001815 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi08G001815
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionIntegrase, catalytic core
Genome locationchr8:63003269..63003538
RNA-Seq ExpressionBhi08G001815
SyntenyBhi08G001815
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.2e-0867.39Show/hide
Query:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV
        SRY +  L TFEEPTTYEE SQ+IQWRK MEEEV+AL+++  WD+V
Subjt:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.6e-2060.67Show/hide
Query:  EGEEKNDEDKKEQL--LCPWHGGAHDRELQFRRPTRQRIPNSRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE
        E EE NDED++EQ+    PW  G +++E Q RR TR R PNSRY N  L TFEEP TYEE SQ+IQWRKAMEEEVD L+++  WD+VP+
Subjt:  EGEEKNDEDKKEQL--LCPWHGGAHDRELQFRRPTRQRIPNSRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE

KAA0061433.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.9e-0864.58Show/hide
Query:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE
        SR+ +  L TFEEP TYEE SQ+IQWRKAMEEEVD L+++  WD+VP+
Subjt:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE

KAE8720906.1 tir-nbs resistance protein [Hibiscus syriacus]3.2e-0837.25Show/hide
Query:  GEEKNDEDKKEQLLCPWHGGAHDR---------------ELQFRRPTRQRIPNSRYANTT-LETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV
        G+   D+ ++ +   PW  G + +               + Q RR TR R PN +YAN T +E   EP T+EEASQ+ +W  AM+EE+DAL++++ WD+V
Subjt:  GEEKNDEDKKEQLLCPWHGGAHDR---------------ELQFRRPTRQRIPNSRYANTT-LETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV

Query:  PE
        P+
Subjt:  PE

TYK21511.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.4e-0864.58Show/hide
Query:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE
        SR+ +  L TFEEP TYEE SQ+IQWRKAMEEEVD L+++  WD+VP+
Subjt:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE

TrEMBL top hitse value%identityAlignment
A0A5A7T1U9 Integrase, catalytic core1.5e-0867.39Show/hide
Query:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV
        SRY +  L TFEEPTTYEE SQ+IQWRK MEEEV+AL+++  WD+V
Subjt:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV

A0A5A7TYD2 Integrase, catalytic core1.8e-2060.67Show/hide
Query:  EGEEKNDEDKKEQL--LCPWHGGAHDRELQFRRPTRQRIPNSRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE
        E EE NDED++EQ+    PW  G +++E Q RR TR R PNSRY N  L TFEEP TYEE SQ+IQWRKAMEEEVD L+++  WD+VP+
Subjt:  EGEEKNDEDKKEQL--LCPWHGGAHDRELQFRRPTRQRIPNSRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE

A0A5A7UZQ7 Integrase, catalytic core9.1e-0964.58Show/hide
Query:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE
        SR+ +  L TFEEP TYEE SQ+IQWRKAMEEEVD L+++  WD+VP+
Subjt:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE

A0A5D3DCW1 Integrase, catalytic core7.0e-0964.58Show/hide
Query:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE
        SR+ +  L TFEEP TYEE SQ+IQWRKAMEEEVD L+++  WD+VP+
Subjt:  SRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPE

A0A6A3BVQ7 Tir-nbs resistance protein1.5e-0837.25Show/hide
Query:  GEEKNDEDKKEQLLCPWHGGAHDR---------------ELQFRRPTRQRIPNSRYANTT-LETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV
        G+   D+ ++ +   PW  G + +               + Q RR TR R PN +YAN T +E   EP T+EEASQ+ +W  AM+EE+DAL++++ WD+V
Subjt:  GEEKNDEDKKEQLLCPWHGGAHDR---------------ELQFRRPTRQRIPNSRYANTT-LETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMV

Query:  PE
        P+
Subjt:  PE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGAAGAAAAAAATGACGAAGACAAAAAAGAGCAACTACTATGTCCTTGGCATGGTGGTGCACATGATCGAGAACTACAATTTCGAAGACCAACCAGACAAAG
AATACCAAATTCCAGGTACGCAAATACAACATTAGAAACATTTGAAGAACCAACGACATACGAAGAAGCGTCACAAAATATCCAATGGAGAAAGGCCATGGAAGAAGAAG
TGGACGCATTGAGAAGACATAGACGTTGGGACATGGTGCCAGAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAGAAGAAAAAAATGACGAAGACAAAAAAGAGCAACTACTATGTCCTTGGCATGGTGGTGCACATGATCGAGAACTACAATTTCGAAGACCAACCAGACAAAG
AATACCAAATTCCAGGTACGCAAATACAACATTAGAAACATTTGAAGAACCAACGACATACGAAGAAGCGTCACAAAATATCCAATGGAGAAAGGCCATGGAAGAAGAAG
TGGACGCATTGAGAAGACATAGACGTTGGGACATGGTGCCAGAAGGCTAA
Protein sequenceShow/hide protein sequence
MEGEEKNDEDKKEQLLCPWHGGAHDRELQFRRPTRQRIPNSRYANTTLETFEEPTTYEEASQNIQWRKAMEEEVDALRRHRRWDMVPEG