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Bhi09G001036 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi09G001036
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:30726880..30727221
RNA-Seq ExpressionBhi09G001036
SyntenyBhi09G001036
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035960.1 uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa]1.3e-2568.48Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSP
        MEARGKL+RLRQ  SIP YIK F T ML+I+DLS+KDALFHF+DGLK+W +IELDRRNV+TLDD +AAAK L D   K KKT+ D GE + P
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSP

KAA0035961.1 uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa]4.0e-2464.89Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSPMK
        MEARGKL+RLRQ  SIP YIK F T ML+I+DLS+KDALFHF+D LK+W +IELDRRNV+TLDD +AAA  L D  +K KK + D GE + P K
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSPMK

KAA0064169.1 uncharacterized protein E6C27_scaffold548G00940 [Cucumis melo var. makuwa]9.3e-2162.5Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGE
        MEAR KL+RLRQT  IP+YIK F T MLK + LS+KDALFHF+D LK+W +IELDRRN++TLDD +A  K+L + S K KKT  D G+
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGE

KAA0065760.1 polyprotein [Cucumis melo var. makuwa]1.3e-1953.15Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFS--TKGKK--TKKDGGETWSPMKIE
        +E+RGKL+RLR T SI +Y+K F T ML+I DL  K+ALF FKDGLK+W +IELDRRNV+TLDD +AAA+ L D+S  +KGKK   +K GG++       
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFS--TKGKK--TKKDGGETWSPMKIE

Query:  RMNKGKCQKWR
        R + GK + ++
Subjt:  RMNKGKCQKWR

XP_008446938.1 PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]1.2e-2054.95Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFST--KGKK--TKKDGGETWSPMKIE
        +E+RGKL+RLR TRSI  Y+K F T ML+I DL  K+ALF FKDGLK+W +IELDRRNV+TLDD +AAA+ L D+ST  KGKK   +K GG+        
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFST--KGKK--TKKDGGETWSPMKIE

Query:  RMNKGKCQKWR
        R + GK + ++
Subjt:  RMNKGKCQKWR

TrEMBL top hitse value%identityAlignment
A0A1S3BG92 uncharacterized protein LOC1034894995.9e-2154.95Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFST--KGKK--TKKDGGETWSPMKIE
        +E+RGKL+RLR TRSI  Y+K F T ML+I DL  K+ALF FKDGLK+W +IELDRRNV+TLDD +AAA+ L D+ST  KGKK   +K GG+        
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFST--KGKK--TKKDGGETWSPMKIE

Query:  RMNKGKCQKWR
        R + GK + ++
Subjt:  RMNKGKCQKWR

A0A5A7SY30 Retrotrans_gag domain-containing protein6.1e-2668.48Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSP
        MEARGKL+RLRQ  SIP YIK F T ML+I+DLS+KDALFHF+DGLK+W +IELDRRNV+TLDD +AAAK L D   K KKT+ D GE + P
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSP

A0A5A7T2W8 Retrotrans_gag domain-containing protein2.0e-2464.89Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSPMK
        MEARGKL+RLRQ  SIP YIK F T ML+I+DLS+KDALFHF+D LK+W +IELDRRNV+TLDD +AAA  L D  +K KK + D GE + P K
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSPMK

A0A5A7VEX8 Polyprotein6.5e-2053.15Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFS--TKGKK--TKKDGGETWSPMKIE
        +E+RGKL+RLR T SI +Y+K F T ML+I DL  K+ALF FKDGLK+W +IELDRRNV+TLDD +AAA+ L D+S  +KGKK   +K GG++       
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFS--TKGKK--TKKDGGETWSPMKIE

Query:  RMNKGKCQKWR
        R + GK + ++
Subjt:  RMNKGKCQKWR

A0A5D3BUR0 Retrotrans_gag domain-containing protein4.5e-2162.5Show/hide
Query:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGE
        MEAR KL+RLRQT  IP+YIK F T MLK + LS+KDALFHF+D LK+W +IELDRRN++TLDD +A  K+L + S K KKT  D G+
Subjt:  MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAAGAGGAAAGCTTAAAAGGCTTAGACAAACTAGAAGCATTCCCAAGTACATAAAGACATTCATGACCTTTATGCTTAAGATAGATGATCTATCCAACAAAGA
CGCACTCTTTCATTTCAAAGATGGTCTTAAGGAATGGGTGAGAATTGAGCTTGATAGGCGCAATGTGAAGACGCTTGATGATACTATGGCTGCCGCAAAAATGCTAACGG
ATTTCTCAACCAAGGGGAAGAAGACCAAGAAAGATGGAGGAGAAACTTGGAGTCCAATGAAGATCGAGAGAATGAACAAAGGGAAATGCCAAAAATGGAGGAAAGAACGA
GAAGGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAAGAGGAAAGCTTAAAAGGCTTAGACAAACTAGAAGCATTCCCAAGTACATAAAGACATTCATGACCTTTATGCTTAAGATAGATGATCTATCCAACAAAGA
CGCACTCTTTCATTTCAAAGATGGTCTTAAGGAATGGGTGAGAATTGAGCTTGATAGGCGCAATGTGAAGACGCTTGATGATACTATGGCTGCCGCAAAAATGCTAACGG
ATTTCTCAACCAAGGGGAAGAAGACCAAGAAAGATGGAGGAGAAACTTGGAGTCCAATGAAGATCGAGAGAATGAACAAAGGGAAATGCCAAAAATGGAGGAAAGAACGA
GAAGGCTATTGA
Protein sequenceShow/hide protein sequence
MEARGKLKRLRQTRSIPKYIKTFMTFMLKIDDLSNKDALFHFKDGLKEWVRIELDRRNVKTLDDTMAAAKMLTDFSTKGKKTKKDGGETWSPMKIERMNKGKCQKWRKER
EGY