; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi09G001201 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi09G001201
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionHistone H3.2
Genome locationchr9:36984321..36996692
RNA-Seq ExpressionBhi09G001201
SyntenyBhi09G001201
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000164 - Histone H3/CENP-A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659152.1 histone H3-1 isoform X1 [Cucumis sativus]1.3e-5790.44Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARARHPP+RKSNR PSG+GAAQSSP APSTPL+GRTQNV QAQ+S  RT KKKKRFRPGTVAL+EIR+LQKSWNLLIPASCFIRAVKEVS QLAPQITR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTI
        WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTI
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTI

XP_011659153.1 histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus]2.5e-6991.56Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARARHPP+RKSNR PSG+GAAQSSP APSTPL+GRTQNV QAQ+S  RT KKKKRFRPGTVAL+EIR+LQKSWNLLIPASCFIRAVKEVS QLAPQITR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

XP_022156549.1 histone H3-like centromeric protein HTR12 [Momordica charantia]1.1e-6485.71Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARARHP QR +NR P G+G A SSPA PSTPL GRTQNV QAQS P RT+ KK+RFRPGTVALREIR  QK+WNLLIPAS FIRAVKEVSYQLAP+ITR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEAL+ALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

XP_022959605.1 histone H3-like centromeric protein HTR12 [Cucurbita moschata]1.8e-6285.71Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARA+HP QR SNR PS  GA+ SS AAPSTPLSGRTQ+  Q QS   RTT KK+RFRPGTVALREIR LQKSWNLLIPAS FIRAVKEVSYQLAPQ+TR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEAL+ALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

XP_038896752.1 histone H3-like centromeric protein HTR12 [Benincasa hispida]9.6e-77100Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

TrEMBL top hitse value%identityAlignment
A0A0A0K4F4 Histone H3.26.3e-5890.44Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARARHPP+RKSNR PSG+GAAQSSP APSTPL+GRTQNV QAQ+S  RT KKKKRFRPGTVAL+EIR+LQKSWNLLIPASCFIRAVKEVS QLAPQITR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTI
        WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTI
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTI

A0A1S3CG56 Histone H3.23.8e-4780.45Show/hide
Query:  SSPAAPSTPLSG-RTQNVE-QAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLF
        S   +PS P    + +N + Q  S P    K+K RFRPGTVALREIR+LQKSWNLLIPASCFIRAVKEVS QLAPQITRWQAEALVALQEAAEDFLVHLF
Subjt:  SSPAAPSTPLSG-RTQNVE-QAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLF

Query:  EDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        EDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  EDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

A0A6J1DTT5 Histone H3.25.3e-6585.71Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARARHP QR +NR P G+G A SSPA PSTPL GRTQNV QAQS P RT+ KK+RFRPGTVALREIR  QK+WNLLIPAS FIRAVKEVSYQLAP+ITR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEAL+ALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

A0A6J1H6R9 Histone H3.28.5e-6385.71Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARA+HP QR SNR PS  GA+ SS AAPSTPLSGRTQ+  Q QS   RTT KK+RFRPGTVALREIR LQKSWNLLIPAS FIRAVKEVSYQLAPQ+TR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEAL+ALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

A0A6J1KTZ4 Histone H3.28.5e-6385.71Show/hide
Query:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR
        MARA+HP QR SNR PS  GA+ SS AAPSTPLSGRTQ+  Q QS   RTT KK+RFRPGTVALREIR LQKSWNLLIPAS FIRAVKEVSYQLAPQ+TR
Subjt:  MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITR

Query:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        WQAEAL+ALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
Subjt:  WQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

SwissProt top hitse value%identityAlignment
P69149 Histone H38.3e-2359.6Show/hide
Query:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK
        KK  RFRPGTVALREIR  QKS +LLI    F R V++++++   ++ R+Q+ A++ALQEAAE +LV LFEDT LCAIHA+RVTIM KD +LARR+ G+
Subjt:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK

Q59LN9 Histone H3-like centromeric protein CSE44.4e-2454.4Show/hide
Query:  AQSSPLRTT-----------KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQ-LAPQI-TRWQAEALVALQEAAEDFLVHLFEDTMLCAI
        A S P RTT           + KKR+RPGT ALREIR  QKS +LLI    F R V+E+S   + P    RWQ+ A++ALQEA+E FL+HL EDT LCAI
Subjt:  AQSSPLRTT-----------KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQ-LAPQI-TRWQAEALVALQEAAEDFLVHLFEDTMLCAI

Query:  HAKRVTIMKKDFELARRLGGKGRPW
        HAKRVTIM+KD +LARR+  +G+ W
Subjt:  HAKRVTIMKKDFELARRLGGKGRPW

Q7RXR3 Histone H3-like centromeric protein hH3v8.0e-2650.77Show/hide
Query:  AQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAP--QITRWQAEALVALQEAAEDFLVH
        A + P   +TP   R       Q        KK+R+RPGT+AL+EIR+ Q++ +LL+    F R V+E++ Q  P  +  RWQ++A++ALQEAAE FLVH
Subjt:  AQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAP--QITRWQAEALVALQEAAEDFLVH

Query:  LFEDTMLCAIHAKRVTIMKKDFELARRLGG
        LFEDT LCAIHAKRVTIM+KD +LARR+ G
Subjt:  LFEDTMLCAIHAKRVTIMKKDFELARRLGG

Q8RVQ9 Histone H3-like centromeric protein HTR121.7e-3652.25Show/hide
Query:  MARARHPPQRKSNR-MPSGTGAAQSSPAAPST---------------------PLSGRTQNVEQA-QSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLL
        MAR +H   R   R      GA+ S  A P+T                     P +G  +  +++ Q+ P  + KK  R+RPGTVAL+EIR  QK  NLL
Subjt:  MARARHPPQRKSNR-MPSGTGAAQSSPAAPST---------------------PLSGRTQNVEQA-QSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLL

Query:  IPASCFIRAVKEVSYQLA-PQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        IPA+ FIR V+ +++ LA PQI RW AEALVALQEAAED+LV LF D+MLCAIHA+RVT+M+KDFELARRLGGKGRPW
Subjt:  IPASCFIRAVKEVSYQLA-PQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

Q9Y812 Histone H3-like centromeric protein cnp13.4e-2459.8Show/hide
Query:  KKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQIT-----RWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRL
        +KKR+RPGT ALREIR  Q+S +LLI    F R V+E+S +     +     RWQ+ AL  LQEAAE FLVHLFEDT LCAIHAKRVTIM++D +LARR+
Subjt:  KKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQIT-----RWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRL

Query:  GG
         G
Subjt:  GG

Arabidopsis top hitse value%identityAlignment
AT1G01370.1 Histone superfamily protein1.2e-3752.25Show/hide
Query:  MARARHPPQRKSNR-MPSGTGAAQSSPAAPST---------------------PLSGRTQNVEQA-QSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLL
        MAR +H   R   R      GA+ S  A P+T                     P +G  +  +++ Q+ P  + KK  R+RPGTVAL+EIR  QK  NLL
Subjt:  MARARHPPQRKSNR-MPSGTGAAQSSPAAPST---------------------PLSGRTQNVEQA-QSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLL

Query:  IPASCFIRAVKEVSYQLA-PQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        IPA+ FIR V+ +++ LA PQI RW AEALVALQEAAED+LV LF D+MLCAIHA+RVT+M+KDFELARRLGGKGRPW
Subjt:  IPASCFIRAVKEVSYQLA-PQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

AT1G01370.2 Histone superfamily protein1.2e-3752.25Show/hide
Query:  MARARHPPQRKSNR-MPSGTGAAQSSPAAPST---------------------PLSGRTQNVEQA-QSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLL
        MAR +H   R   R      GA+ S  A P+T                     P +G  +  +++ Q+ P  + KK  R+RPGTVAL+EIR  QK  NLL
Subjt:  MARARHPPQRKSNR-MPSGTGAAQSSPAAPST---------------------PLSGRTQNVEQA-QSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLL

Query:  IPASCFIRAVKEVSYQLA-PQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW
        IPA+ FIR V+ +++ LA PQI RW AEALVALQEAAED+LV LF D+MLCAIHA+RVT+M+KDFELARRLGGKGRPW
Subjt:  IPASCFIRAVKEVSYQLA-PQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW

AT1G09200.1 Histone superfamily protein1.3e-2361.62Show/hide
Query:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++      + R+Q+ A+ ALQEAAE +LV LFEDT LCAIHAKRVTIM KD +LARR+ G+
Subjt:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK

AT3G27360.1 Histone superfamily protein1.3e-2361.62Show/hide
Query:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++      + R+Q+ A+ ALQEAAE +LV LFEDT LCAIHAKRVTIM KD +LARR+ G+
Subjt:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK

AT5G10390.1 Histone superfamily protein1.3e-2361.62Show/hide
Query:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK
        KK  RFRPGTVALREIR  QKS  LLI    F R V+E++      + R+Q+ A+ ALQEAAE +LV LFEDT LCAIHAKRVTIM KD +LARR+ G+
Subjt:  KKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGAGCGAGGCATCCACCCCAAAGGAAGTCCAATCGCATGCCATCAGGTACCGGAGCTGCACAGTCTTCCCCAGCTGCGCCTTCGACGCCACTTAGCGGAAGAAC
ACAAAATGTGGAGCAAGCTCAAAGCTCACCATTGAGGACAACAAAGAAAAAAAAACGCTTCAGACCAGGAACGGTGGCATTGAGGGAAATTCGGAGTCTCCAGAAATCAT
GGAATCTACTAATTCCAGCTAGCTGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAGTAGCTCTTCAG
GAAGCGGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACCATGCTGTGTGCTATTCATGCCAAGCGTGTAACTATCATGAAAAAGGATTTTGAGCTGGCACGTCGATT
AGGAGGGAAAGGGAGGCCATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCGAGCGAGGCATCCACCCCAAAGGAAGTCCAATCGCATGCCATCAGGTACCGGAGCTGCACAGTCTTCCCCAGCTGCGCCTTCGACGCCACTTAGCGGAAGAAC
ACAAAATGTGGAGCAAGCTCAAAGCTCACCATTGAGGACAACAAAGAAAAAAAAACGCTTCAGACCAGGAACGGTGGCATTGAGGGAAATTCGGAGTCTCCAGAAATCAT
GGAATCTACTAATTCCAGCTAGCTGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAGTAGCTCTTCAG
GAAGCGGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACCATGCTGTGTGCTATTCATGCCAAGCGTGTAACTATCATGAAAAAGGATTTTGAGCTGGCACGTCGATT
AGGAGGGAAAGGGAGGCCATGGTGA
Protein sequenceShow/hide protein sequence
MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPGTVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQ
EAAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW