; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi09G002811 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi09G002811
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr9:86891998..86892424
RNA-Seq ExpressionBhi09G002811
SyntenyBhi09G002811
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031947.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]7.8e-2543.21Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM
        M++K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D + + + D ++  LM+LY  YK S + G AF          C  VE S+    +  
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM

Query:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
           +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

KAA0050616.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.1e-2342.94Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM+LY  YK         +D SG A    C  VE S+    + 
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME

Query:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

KAA0062374.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.1e-2343.21Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM LY  YK S   G AF          C  VE S+    +  
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM

Query:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
           +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.1e-2342.94Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM+LY  YK         +D SG A    C  VE S+    + 
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME

Query:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.1e-2342.94Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM+LY  YK         +D SG A    C  VE S+    + 
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME

Query:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

TrEMBL top hitse value%identityAlignment
A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.8e-2543.21Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM
        M++K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D + + + D ++  LM+LY  YK S + G AF          C  VE S+    +  
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM

Query:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
           +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

A0A5A7V549 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.5e-2443.21Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM LY  YK S   G AF          C  VE S+    +  
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQP-------CHIVEISEDCDDMEM

Query:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
           +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  DLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.5e-2442.94Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM+LY  YK         +D SG A    C  VE S+    + 
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME

Query:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.5e-2442.94Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM+LY  YK         +D SG A    C  VE S+    + 
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME

Query:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

A0A5D3DTE1 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.5e-2442.94Show/hide
Query:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME
        M+ K+DKYWGS++K+NK      V DPRYKLDYV F F SI+ D   + + D ++  LM+LY  YK         +D SG A    C  VE S+    + 
Subjt:  MRMKFDKYWGSLDKMNK------VFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKI--------SDSSGHAFEQPCHIVEISEDCDDME

Query:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            +E          YKRRR+ +   E RNDV+RYLS+P E+L + FD+L WWKLNA KY +
Subjt:  MDLQLE----------YKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.8e-0629.41Show/hide
Query:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFY----------KISDSSGH---AFEQPCHIVEISEDCDD
        M  +FDKYW   +    +  V DPR+K+  V F +  IY  V A      V  ++ +LY  Y           +    G+   A E        S     
Subjt:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFY----------KISDSSGH---AFEQPCHIVEISEDCDD

Query:  MEMDLQLEYKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKY
        ++ D+ L      +      T++++E+YL E     I+ FDILNWWKLN  KY
Subjt:  MEMDLQLEYKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKY

P03010 Putative AC9 transposase1.9e-0529.45Show/hide
Query:  MRMKFDKYWGSLDKMNKV---FDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQ----LEY
        M  KF+KYW   +    V    DPRYK   + FY    + D     + D V+V + KLY+FY     S      P      ++  DD  M+ +      Y
Subjt:  MRMKFDKYWGSLDKMNKV---FDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQ----LEY

Query:  KRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            K     E+ N++++Y+SEP       FDIL+WW+    +Y +
Subjt:  KRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

P08770 Putative AC transposase1.9e-0529.45Show/hide
Query:  MRMKFDKYWGSLDKMNKV---FDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQ----LEY
        M  KF+KYW   +    V    DPRYK   + FY    + D     + D V+V + KLY+FY     S      P      ++  DD  M+ +      Y
Subjt:  MRMKFDKYWGSLDKMNKV---FDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQ----LEY

Query:  KRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV
            K     E+ N++++Y+SEP       FDIL+WW+    +Y +
Subjt:  KRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKYKV

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.1e-0528.76Show/hide
Query:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFY----------KISDSSGH---AFEQPCHIVEISEDCDD
        M  +FDKYW   +    +  V DPR+K+  V F +  IY  V A      V  ++ +LY+ Y           +    G+   A E        S     
Subjt:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFY----------KISDSSGH---AFEQPCHIVEISEDCDD

Query:  MEMDLQLEYKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKY
        ++ D+ L      +      T++++E+YL E     I+ FDILNWWKLN  K+
Subjt:  MEMDLQLEYKRRRKGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKY

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 31.9e-0528.37Show/hide
Query:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQLEYKRRR
        M  +FDKYW   +    +  V DPR+K+  V F +  I+    A+     VKV    ++E Y    + G A  +  H+ + S        D  L++    
Subjt:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQLEYKRRR

Query:  KGKILNE-TRNDVERYLSEPNEDLIENFDILNWWKLNAPKY
             ++ + +++E+YL E     I++F+IL WWKLN  K+
Subjt:  KGKILNE-TRNDVERYLSEPNEDLIENFDILNWWKLNAPKY

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.6e-0427.14Show/hide
Query:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQLEYKRRR
        M+ K DKYW        M  V DPR+K+  V F F  I+ +   + +   V   + +L+  Y        A   P +        D +  D    Y    
Subjt:  MRMKFDKYWGSLD---KMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQLEYKRRR

Query:  KGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKY
         G+ L   ++++++YL E     ++ FD+L+WWK N  KY
Subjt:  KGKILNETRNDVERYLSEPNEDLIENFDILNWWKLNAPKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATGAAATTTGATAAGTATTGGGGATCCCTTGACAAGATGAACAAAGTGTTTGATCCACGATATAAGTTGGATTATGTGTCCTTTTATTTCATAAGTATCTATAG
GGATGTAGTTGCTAGAACAATGACTGATGAGGTGAAAGTTAGTTTGATGAAATTGTATGAGTTTTATAAGATAAGTGATTCAAGTGGTCATGCTTTTGAACAACCATGTC
ACATAGTTGAAATAAGTGAAGATTGTGATGACATGGAAATGGATTTACAGTTGGAATACAAACGAAGAAGAAAAGGCAAAATTTTGAATGAAACAAGAAATGATGTGGAG
AGATATTTATCAGAACCTAATGAAGATCTGATAGAAAATTTTGATATTTTGAATTGGTGGAAATTAAATGCTCCTAAATACAAAGTTTTTATCACAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATGAAATTTGATAAGTATTGGGGATCCCTTGACAAGATGAACAAAGTGTTTGATCCACGATATAAGTTGGATTATGTGTCCTTTTATTTCATAAGTATCTATAG
GGATGTAGTTGCTAGAACAATGACTGATGAGGTGAAAGTTAGTTTGATGAAATTGTATGAGTTTTATAAGATAAGTGATTCAAGTGGTCATGCTTTTGAACAACCATGTC
ACATAGTTGAAATAAGTGAAGATTGTGATGACATGGAAATGGATTTACAGTTGGAATACAAACGAAGAAGAAAAGGCAAAATTTTGAATGAAACAAGAAATGATGTGGAG
AGATATTTATCAGAACCTAATGAAGATCTGATAGAAAATTTTGATATTTTGAATTGGTGGAAATTAAATGCTCCTAAATACAAAGTTTTTATCACAA
Protein sequenceShow/hide protein sequence
MRMKFDKYWGSLDKMNKVFDPRYKLDYVSFYFISIYRDVVARTMTDEVKVSLMKLYEFYKISDSSGHAFEQPCHIVEISEDCDDMEMDLQLEYKRRRKGKILNETRNDVE
RYLSEPNEDLIENFDILNWWKLNAPKYKVFIT