; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Bhi11G001237 (gene) of Wax gourd (B227) v1 genome

Gene IDBhi11G001237
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr11:41897334..41897675
RNA-Seq ExpressionBhi11G001237
SyntenyBhi11G001237
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]4.6e-2046.36Show/hide
Query:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI
        + +RH V  IDQ  F+V   +L G+VDLNA MCSC++FDY+ +PCSHAIAA   RNI+P +LC   Y   +   +Y EPIFP+G IS      ++ +I +
Subjt:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI

Query:  LSPIRVAQVG
          P  V +VG
Subjt:  LSPIRVAQVG

XP_038889288.1 uncharacterized protein LOC120079194 [Benincasa hispida]2.4e-3768.47Show/hide
Query:  TKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQIL
        ++RHFVRPID HIF+V+  HLSGVV LN   C+CKDF+YYDMPCSH IAA RYRNIDP T CS  YNIQ +YG Y +PIF +G I E P+GDDY+DIQIL
Subjt:  TKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQIL

Query:  SPIRVAQVGLH
         PI V QVG H
Subjt:  SPIRVAQVGLH

XP_038890792.1 uncharacterized protein LOC120080248 [Benincasa hispida]9.3e-2150.49Show/hide
Query:  RHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSP
        +H VRPIDQH F+V+   L G V+++AR C+C+ FDYY++ CSHAIAA R RNID  + CS  Y+I A+  +Y EPI PLG   E  Q   + D++ L P
Subjt:  RHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSP

Query:  IRV
         RV
Subjt:  IRV

XP_038904344.1 uncharacterized protein LOC120090698 [Benincasa hispida]1.9e-61100Show/hide
Query:  MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQ
        MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQ
Subjt:  MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQ

Query:  ILSPIRVAQVGLH
        ILSPIRVAQVGLH
Subjt:  ILSPIRVAQVGLH

XP_038904373.1 uncharacterized protein LOC120090731 [Benincasa hispida]6.5e-2248.6Show/hide
Query:  RHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSP
        R+ VRPIDQ+ F+V+   L G V+++ R C+C+ FDYY +PCSHAIAA R +NIDP +LCS  Y+I AI  +Y EP+  LG   E  Q   + D++ L P
Subjt:  RHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSP

Query:  IRVAQVG
         RV ++G
Subjt:  IRVAQVG

TrEMBL top hitse value%identityAlignment
A0A6J1CVL4 uncharacterized protein LOC1110151811.9e-1943.64Show/hide
Query:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI
        + +RH V  IDQ  F+V   +L G+VDLNA  C+C++FDY+ +PCSHAIAA   RNI+P +LC   Y   +   +Y EPIFP+G +S      ++ +I +
Subjt:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI

Query:  LSPIRVAQVG
          P  V +VG
Subjt:  LSPIRVAQVG

A0A6J1CYE7 uncharacterized protein LOC1110156012.5e-1944.55Show/hide
Query:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI
        + +RH V  IDQ  F+V   +L G+VDLNA  CSC++FDY+ +PCSHAIAA   RNI+P +LC   Y       +Y EPIFP+G +S      ++ +I +
Subjt:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI

Query:  LSPIRVAQVG
          P  V +VG
Subjt:  LSPIRVAQVG

A0A6J1DQ99 uncharacterized protein LOC1110232351.5e-1944.04Show/hide
Query:  TKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQIL
        ++R+ V+P+D  +F V    L   VDLNAR C+C +F Y  +PCSHAIAA R++NI+  TL  P YN+ ++ G+Y EPI P+G +SE  +  DY+ I + 
Subjt:  TKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQIL

Query:  SPIRVAQVG
         P  V + G
Subjt:  SPIRVAQVG

A0A6J1DQV1 uncharacterized protein LOC1110222993.8e-2042.59Show/hide
Query:  KRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILS
        ++H +RPID + ++V   +    V+LN++ C+CK FDYY +PCSHA+ A  +RN+   TLCSP Y ++ +  +Y EPI+PLG   + P  DD+ +  I  
Subjt:  KRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILS

Query:  PIRVAQVG
        P  VA+VG
Subjt:  PIRVAQVG

A0A6J1DYC4 uncharacterized protein LOC1110256782.2e-2046.36Show/hide
Query:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI
        + +RH V  IDQ  F+V   +L G+VDLNA MCSC++FDY+ +PCSHAIAA   RNI+P +LC   Y   +   +Y EPIFP+G IS      ++ +I +
Subjt:  TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQI

Query:  LSPIRVAQVG
          P  V +VG
Subjt:  LSPIRVAQVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase1.2e-0528.99Show/hide
Query:  SGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ
        SG+V LN   C+C +F     PC HA+A      I+P       Y ++  + +Y     P+  +S  P+
Subjt:  SGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ

AT1G64255.1 MuDR family transposase1.5e-0526.09Show/hide
Query:  TKRHFVRPIDQHIFKVVGIHLSG--VVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ
        T  + V P+D + F+V      G  +V L+   C+C DF  Y  PC HA+A  +    +P       Y ++ +  +Y      +  +S  P+
Subjt:  TKRHFVRPIDQHIFKVVGIHLSG--VVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ

AT1G64260.1 MuDR family transposase2.6e-0526.87Show/hide
Query:  VVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ
        +V LN   C+C+ F  Y  PC HA+A      I+P       Y ++    +Y     P+  ++  P+
Subjt:  VVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACTAAAAGGCATTTTGTGAGGCCGATTGATCAACACATTTTTAAAGTTGTTGGTATTCACCTTAGTGGAGTTGTTGACTTGAATGCGCGTATGTGTTCGTGCAA
GGATTTTGATTATTACGACATGCCATGCTCCCATGCGATTGCAGCAGTCCGTTACCGGAACATTGATCCATGCACACTTTGTTCCCCTTACTACAATATTCAGGCTATTT
ACGGATCATATGGAGAACCTATTTTCCCTTTAGGCTCTATTTCAGAAGGGCCTCAGGGGGATGATTACGAAGACATCCAAATATTGTCGCCGATTCGTGTTGCTCAAGTT
GGCCTCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGACTAAAAGGCATTTTGTGAGGCCGATTGATCAACACATTTTTAAAGTTGTTGGTATTCACCTTAGTGGAGTTGTTGACTTGAATGCGCGTATGTGTTCGTGCAA
GGATTTTGATTATTACGACATGCCATGCTCCCATGCGATTGCAGCAGTCCGTTACCGGAACATTGATCCATGCACACTTTGTTCCCCTTACTACAATATTCAGGCTATTT
ACGGATCATATGGAGAACCTATTTTCCCTTTAGGCTCTATTTCAGAAGGGCCTCAGGGGGATGATTACGAAGACATCCAAATATTGTCGCCGATTCGTGTTGCTCAAGTT
GGCCTCCACTAG
Protein sequenceShow/hide protein sequence
MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQV
GLH