CuGenDBv2

Gene ID	Bhi12G002003
Organism	Benincasa hispida cv. B227 (Wax gourd (B227) v1)
Description	serine/arginine repetitive matrix protein 1
Genome location	chr12:71575345..71577629
RNA-Seq Expression	Bhi12G002003
Synteny	Bhi12G002003
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008459744.1 PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]

3.2e-54

74.25

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAASST P+PS  RLPI T P P  PVS  YA+S PPK DA NT PN+S +IKSFGHKILSAVNSP P+SL    N+TTPK E+QPEA QISGSD+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQV---KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPG
        LQKAAAVKEKNRT+QV   K KKKEG  TE S+SEMNHRVRPLKIK DWGLRL+QLEKRL E SEPG
Subjt:  LQKAAAVKEKNRTRQV---KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPG

XP_011656857.1 uncharacterized protein LOC105435778 [Cucumis sativus]

7.4e-51

73.33

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAASST P PSCHRL I T   PTPP+S   A SQP  TDA N  PN+SSSIK FGHKILSAVNSP PKSL    N+TTPK E+ PEAAQISGSD+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQV--KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP
        LQKAAAVKEK RT+QV  K KKKEG  TE S SEMNHRVRPLKI  DWGLRL+QLEKRL E S+P
Subjt:  LQKAAAVKEKNRTRQV--KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]

2.8e-50

71.69

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MW A ST P+PSC RLP+ TRP PTPPVSAIYA++QPP+TDA N TPN+S+SIKSFGHKILSA NS NPKS +P       KQE+Q E AQISG D+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE
        LQKAAAVKEKNRTRQ K +KK+G P TEGS   +SEMN RVRPL+IK DWGLRL++LEKRLQE SE
Subjt:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]

2.5e-51

72.89

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAA ST P+PSC RLP+ TRPLPTPPVSAIYA++QPP TDA N TPN+SSSIKSFGHKILSA  S NPKS +P       KQE+Q E A+ISG D+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE
        LQKAAAVKEKNRTRQVK +KK+G P TEGS   +SEMN RVRPL+IK DWGLRL++LEKRLQE SE
Subjt:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]

1.3e-82

100

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQVKGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP
        LQKAAAVKEKNRTRQVKGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP
Subjt:  LQKAAAVKEKNRTRQVKGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCJ8 Uncharacterized protein

3.6e-51

73.33

Show/hide

Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAASST P PSCHRL I T   PTPP+S   A SQP  TDA N  PN+SSSIK FGHKILSAVNSP PKSL    N+TTPK E+ PEAAQISGSD+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQV--KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP
        LQKAAAVKEK RT+QV  K KKKEG  TE S SEMNHRVRPLKI  DWGLRL+QLEKRL E S+P
Subjt:  LQKAAAVKEKNRTRQV--KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEP

A0A1S3CAW4 uncharacterized protein LOC103498786

1.6e-54

74.25

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAASST P+PS  RLPI T P P  PVS  YA+S PPK DA NT PN+S +IKSFGHKILSAVNSP P+SL    N+TTPK E+QPEA QISGSD+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQV---KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPG
        LQKAAAVKEKNRT+QV   K KKKEG  TE S+SEMNHRVRPLKIK DWGLRL+QLEKRL E SEPG
Subjt:  LQKAAAVKEKNRTRQV---KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPG

A0A5D3DMB8 Chaperone ClpB

1.6e-54

74.25

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAASST P+PS  RLPI T P P  PVS  YA+S PPK DA NT PN+S +IKSFGHKILSAVNSP P+SL    N+TTPK E+QPEA QISGSD+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQV---KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPG
        LQKAAAVKEKNRT+QV   K KKKEG  TE S+SEMNHRVRPLKIK DWGLRL+QLEKRL E SEPG
Subjt:  LQKAAAVKEKNRTRQV---KGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPG

A0A6J1H4Y8 uncharacterized protein LOC111460438

1.4e-50

71.69

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MW A ST P+PSC RLP+ TRP PTPPVSAIYA++QPP+TDA N TPN+S+SIKSFGHKILSA NS NPKS +P       KQE+Q E AQISG D+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE
        LQKAAAVKEKNRTRQ K +KK+G P TEGS   +SEMN RVRPL+IK DWGLRL++LEKRLQE SE
Subjt:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE

A0A6J1L2U1 uncharacterized protein LOC111499329

1.2e-51

72.89

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Query:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA
        MWAA ST P+PSC RLP+ TRPLPTPPVSAIYA++QPP TDA N TPN+SSSIKSFGHKILSA  S NPKS +P       KQE+Q E A+ISG D+LRA
Subjt:  MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRA

Query:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE
        LQKAAAVKEKNRTRQVK +KK+G P TEGS   +SEMN RVRPL+IK DWGLRL++LEKRLQE SE
Subjt:  LQKAAAVKEKNRTRQVKGKKKEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G46735.1 unknown protein

2.0e-06

31.06

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Query:  LPIITRPLPTPPVSAIYAESQPPKTDAGN-------TTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRALQKAAA--
        +P+     PT   S  Y++  P   D  +       T    S S+   G +IL        ++++  P K  PK+       +ISGSD+L A+Q+A A  
Subjt:  LPIITRPLPTPPVSAIYAESQPPKTDAGN-------TTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRALQKAAA--

Query:  -------VKEKNRTRQVKGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEF
                K KNR   V+     G  T G +      V PL+IK DWG RL + EK L+EF
Subjt:  -------VKEKNRTRQVKGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGGGCTGCCTCGTCCACCTTACCAACTCCGTCCTGCCACCGCCTCCCGATTATAACCAGGCCACTACCGACGCCTCCGGTCTCCGCCATCTACGCAGAATCC
CAGCCACCCAAGACCGACGCCGGAAACACCACACCAAACGACAGTAGCAGCATCAAAAGCTTTGGCCACAAAATTCTCTCAGCCGTGAACTCCCCAAATCCCAAA
TCCCTAAACCCCAAACCAAACAAAACCACCCCAAAACAAGAAGCGCAACCGGAGGCTGCCCAAATTAGTGGGTCCGATATTCTCAGGGCACTGCAGAAGGCAGCT
GCCGTGAAGGAGAAGAACAGAACCCGACAAGTTAAAGGGAAGAAGAAAGAAGGGCCAACCACCGAAGGCAGCCACTCTGAGATGAACCATAGAGTGAGGCCTCTG
AAGATCAAGGGCGATTGGGGATTGAGGCTCAGCCAATTGGAAAAACGCCTTCAGGAATTCTCTGAGCCGGGTATCTAA

mRNA sequence

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TGCTTGTACACGTTGAAGCGTCATTATTTTCCCATCAAACAGAATTCCCCAAATCCAAACCATGTGGGCTGCCTCGTCCACCTTACCAACTCCGTCCTGCCACCG
CCTCCCGATTATAACCAGGCCACTACCGACGCCTCCGGTCTCCGCCATCTACGCAGAATCCCAGCCACCCAAGACCGACGCCGGAAACACCACACCAAACGACAG
TAGCAGCATCAAAAGCTTTGGCCACAAAATTCTCTCAGCCGTGAACTCCCCAAATCCCAAATCCCTAAACCCCAAACCAAACAAAACCACCCCAAAACAAGAAGC
GCAACCGGAGGCTGCCCAAATTAGTGGGTCCGATATTCTCAGGGCACTGCAGAAGGCAGCTGCCGTGAAGGAGAAGAACAGAACCCGACAAGTTAAAGGGAAGAA
GAAAGAAGGGCCAACCACCGAAGGCAGCCACTCTGAGATGAACCATAGAGTGAGGCCTCTGAAGATCAAGGGCGATTGGGGATTGAGGCTCAGCCAATTGGAAAA
ACGCCTTCAGGAATTCTCTGAGCCGGGTATCTAATCCCATTCGCTCCCCATGCTTTCGCACCCCAGCG

Protein sequence

Show/hide protein sequence

MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKILSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRALQKAA
AVKEKNRTRQVKGKKKEGPTTEGSHSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSEPGI

Bhi12G002003 (gene) of Wax gourd (B227) v1 genome