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BhiUN159G2 (gene) of Wax gourd (B227) v1 genome

Gene IDBhiUN159G2
OrganismBenincasa hispida cv. B227 (Wax gourd (B227) v1)
DescriptionS1 motif domain-containing protein
Genome locationContig159:7389..8544
RNA-Seq ExpressionBhiUN159G2
SyntenyBhiUN159G2
Gene Ontology termsGO:0034337 - RNA folding (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042780.1 protein MLP1 [Cucumis melo var. makuwa]8.9e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
XP_008437231.1 PREDICTED: uncharacterized protein LOC103482723 isoform X1 [Cucumis melo]8.9e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
XP_008437232.1 PREDICTED: uncharacterized protein LOC103482723 isoform X2 [Cucumis melo]8.9e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
XP_011654764.1 uncharacterized protein LOC101217667 [Cucumis sativus]8.9e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
XP_038876514.1 uncharacterized protein LOC120068947 [Benincasa hispida]3.2e-5598.15Show/hide
Query:  MEANHTWFVVPLPSNQHSIGYKWVYKEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWKQSTRGKLHDPKFYTNSSLLVDLIDALDR
        MEANHTWFVVPLPSNQHSIGYKWVYKEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWKQSTRGKLHDPKFYTNSSLLVDLIDALDR
Subjt:  MEANHTWFVVPLPSNQHSIGYKWVYKEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWKQSTRGKLHDPKFYTNSSLLVDLIDALDR

Query:  LCTVEGKV
        LCTVEG +
Subjt:  LCTVEGKV
TrEMBL top hitse value%identityAlignment
A0A0A0KKL1 S1 motif domain-containing protein4.3e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
A0A1S3AU26 uncharacterized protein LOC103482723 isoform X24.3e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
A0A1S3AU41 uncharacterized protein LOC103482723 isoform X14.3e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
A0A5A7THK9 Protein MLP14.3e-1385.11Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        +EHELADWTKAEDLAKSGD ADVEVISSSTRGFVVSFGSL+GF+ ++
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
A0A6J1H2N6 uncharacterized protein LOC1114598109.6e-1351.81Show/hide
Query:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWKQST------------RGKLHDPKFYTNSSLLVDLID
        +EHELADWTKAEDLAKSGD ADVE+ISS+TRGFVVSFGS++GF+ ++  +            R K  DP  Y  +  ++ + D
Subjt:  KEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWKQST------------RGKLHDPKFYTNSSLLVDLID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12800.1 Nucleic acid-binding, OB-fold-like protein1.9e-0865.85Show/hide
Query:  DWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK
        DW KAE L K+   ADVE+ISSSTRGF VS+GSLIGF+ ++
Subjt:  DWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAATCATACTTGGTTTGTTGTTCCACTTCCTTCAAACCAACATTCCATTGGATACAAGTGGGTTTATAAGGAACACGAACTTGCTGACTGGACTAAAGCAGA
GGATCTGGCAAAGTCAGGAGACATAGCCGATGTGGAAGTAATAAGCTCGAGTACTCGAGGTTTTGTTGTATCATTTGGCTCCCTAATAGGATTTATGACCTGGAAACAAA
GTACGAGAGGTAAATTGCATGACCCTAAATTTTACACCAATTCATCCTTACTAGTGGACTTGATTGATGCACTTGATCGGCTTTGTACTGTTGAAGGTAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
GACATTGTTTTGCCTAAGTCTTTTGATTTTGCTTGGTTACCTAATTAGAATTCGCTTGCTCATACTATTGATCATGCTTTTACTAATACTGTTGGTTGCTTGAATAATTG
TGATGTTGATAGATCAATTTCGGGTATTGCTAATAATGGTGATGATAGTACATTGATTTCTTCTTAGCCAAATAATGTTCTTGATACATCTATAACTATTGATGAAATTG
GTGTGCCATAGTTTGAATATTCACAGCCTAATACATTACCTATTAGTCAAGATTTAGTTACATCACAACCTACTAATCTCAGAAAGTCTTCTGGAGCTAGCCACCTTCTT
GCTTGAAGGATTCTAACTGCAACTTGTTATATTCTCAAGATAATCTGTTACAAACTACTACTTCTTTTACCATATATCCTTTACAGAATTACTTGTCTTATGATCATTTG
TCTGATGATTATCGTAGTTTTGTCTTACAGCTTTCAGCATCATATAAACCTCAGTTTTTAATCAAGGTGTCAAGTTTACACATTGGCAAAAGGCAAAGGATTCTGATTAG
TTGCTATGGAGGCGAATCATACTTGGTTTGTTGTTCCACTTCCTTCAAACCAACATTCCATTGGATACAAGTGGGTTTATAAGGAACACGAACTTGCTGACTGGACTAAA
GCAGAGGATCTGGCAAAGTCAGGAGACATAGCCGATGTGGAAGTAATAAGCTCGAGTACTCGAGGTTTTGTTGTATCATTTGGCTCCCTAATAGGATTTATGACCTGGAA
ACAAAGTACGAGAGGTAAATTGCATGACCCTAAATTTTACACCAATTCATCCTTACTAGTGGACTTGATTGATGCACTTGATCGGCTTTGTACTGTTGAAGGTAAAGTTT
AATCATCTAATATGAGAGTGGTTTATTTTATCTTATTTTCTTTATGACAGTGATATTGATTAGATG
Protein sequenceShow/hide protein sequence
MEANHTWFVVPLPSNQHSIGYKWVYKEHELADWTKAEDLAKSGDIADVEVISSSTRGFVVSFGSLIGFMTWKQSTRGKLHDPKFYTNSSLLVDLIDALDRLCTVEGKV