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CSPI01G00010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G00010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S acidic ribosomal protein P1-like
Genome locationChr1:3006..4307
RNA-Seq ExpressionCSPI01G00010
SyntenyCSPI01G00010
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045366.1 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa]1.4e-4596.3Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAPTASAA A AIEEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_004138012.2 60S acidic ribosomal protein P1 [Cucumis sativus]6.6e-48100Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_008455614.1 PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo]4.7e-4697.22Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_038905168.1 60S acidic ribosomal protein P1-like [Benincasa hispida]8.1e-4695.37Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAP  SAAAAPA+EEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_038905286.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.5e-4493.52Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAV+AAAGL VESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAP  SAAAAPA+EEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LTV1 Uncharacterized protein3.2e-48100Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

A0A1S3C0X1 60S acidic ribosomal protein P1-like isoform X12.3e-4697.22Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

A0A5A7TTB2 60S acidic ribosomal protein P1-like isoform X16.7e-4696.3Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAPTASAA A AIEEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

A0A6J1CGB2 60S acidic ribosomal protein P1-like5.3e-4389.19Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAP---TASAAAAPAIEEKREEPKEE
        MSTSELACAYAA+AL+DDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA V+VAAP    A++AAAPA+EEK+EEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAP---TASAAAAPAIEEKREEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like2.4e-4390Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPT--ASAAAAPAIEEKREEPKEES
        MSTSELACAYAALALHDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA+V+VAAP   A++AAAPA+EEK+EEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPT--ASAAAAPAIEEKREEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-22.1e-2863.72Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGC-GGGAAASVAVAAPTA---SAAAAPAIEEKREEPK
        MST  ELAC+YA + L D+GIAIT++KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG  GGG  A V+ AAP A   +AAAAPA EEK++EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGC-GGGAAASVAVAAPTA---SAAAAPAIEEKREEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

P29763 60S acidic ribosomal protein P11.8e-2460.55Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEES-D
        MSTSELAC YAAL LHDDG+ ITA+ I  +  AAG+ VE YWP+LFAKL  K+++ DL+ NVG GGGAA   A AAP A  A A     K+EE KE S +
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEES-D

Query:  DDMGFSLFD
        +DMGFSLFD
Subjt:  DDMGFSLFD

P52855 60S acidic ribosomal protein P12.1e-3373.64Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPT--ASAAAAPAIEEKREEPKEES
        M++ ELAC YAAL L DDGIAITAEKIA +V AA + VESYWP+LFAKL EKRN+ DL+L+VG GGG AA VA AAP   A+AAAAPA+EEK+EE KEES
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPT--ASAAAAPAIEEKREEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-11.1e-2966.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   AAAAPA EE K++EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.1e-2965.49Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPK
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   +AAAAPA EE K++EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family7.8e-3166.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   AAAAPA EE K++EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family7.8e-3166.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   AAAAPA EE K++EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family7.8e-3166.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   AAAAPA EE K++EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family7.8e-3165.49Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPK
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   +AAAAPA EE K++EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family7.8e-3165.49Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPK
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  A VA AAP A   +AAAAPA EE K++EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAACTCGCGTGCGCGTACGCCGCCCTGGCTCTTCACGATGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTG
TGTGGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCCGAGAAGAGGAACATTGGGGACCTTCTTCTTAATGTTGGCTGTGGAGGTGGCGCTGCGGCTTCTGTGGCTG
TAGCTGCTCCTACCGCCAGTGCTGCTGCCGCTCCTGCCATCGAGGAAAAGAGGGAGGAGCCAAAGGAGGAGAGCGATGATGATATGGGATTCAGCTTATTCGATTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTTGGTAGTGGCATGAAAAACCCTAAATCCTAATCCCTCTTCTCTCAGTATATAATCAGATAGAGTAGTGGCGATCGACGGACGCGAATTTTGCCTCCCAATTGTCT
CCTTTCAGCTCTGAGATCATTATTGATTGGTTAATTCGCATTTAGCCATGTCTACCAGTGAACTCGCGTGCGCGTACGCCGCCCTGGCTCTTCACGATGATGGAATCGCA
ATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTGGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCCGAGAAGAGGAACATTGGGGACCT
TCTTCTTAATGTTGGCTGTGGAGGTGGCGCTGCGGCTTCTGTGGCTGTAGCTGCTCCTACCGCCAGTGCTGCTGCCGCTCCTGCCATCGAGGAAAAGAGGGAGGAGCCAA
AGGAGGAGAGCGATGATGATATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTATTTTGTAGGATTTTAACAGGAAACTATTTGGGTGGCTAGCTTAATTTTGATTT
TTCGCTACTAATTTATCTCAAGATTTGTCTCTTTAATTGGGAGTTTTGAGTTTTGATTTGCCTTCAATGTACCGGTAACTGCATATTTTCATTCTTTTTTCTTAATTACT
CCACATTGCAATGAGATCAAAATTTATGAGAGGAGTTATTTGGTTAAACCCGGGAACCACGTTTCTCGGTTGCAATGAGATCAAAATTTATGA
Protein sequenceShow/hide protein sequence
MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD