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CSPI01G00980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G00980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMyelin transcription factor 1-like protein
Genome locationChr1:586550..587079
RNA-Seq ExpressionCSPI01G00980
SyntenyCSPI01G00980
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057816.1 hypothetical protein E6C27_scaffold274G001000 [Cucumis melo var. makuwa]2.9e-5092.97Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTP TATATSAIFVLLSGLC++VFNSD+LMGRWLPILGLLAVA VALMAARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLASV+VKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIDLLSSFSA
        LAVAFAALFSF+AV RSTEIDLLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIDLLSSFSA

KAG7021425.1 hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3374.4Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N  DLMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIDLLS
        L+AVAFAA+ SF AV+RS EID LS
Subjt:  LLAVAFAALFSFLAVLRSTEIDLLS

KGN63537.2 hypothetical protein Csa_013462 [Cucumis sativus]2.8e-5397.66Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTPT ATATSAIFVLLSGLCFLVFNSD+LMGRWLPILGLLAVAVV LMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIDLLSSFSA
        LAVAFAALFSFLAVLRSTEIDLLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIDLLSSFSA

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]6.4e-3474.4Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N  DLMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL++V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIDLLS
        L+AVAFAA+ SF+AV+RS EID LS
Subjt:  LLAVAFAALFSFLAVLRSTEIDLLS

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]8.4e-3474.4Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N  DLMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIDLLS
        L+AVAFAA+ SF+AV+RS EID LS
Subjt:  LLAVAFAALFSFLAVLRSTEIDLLS

TrEMBL top hitse value%identityAlignment
A0A0A0LNT4 Uncharacterized protein6.2e-5198.36Show/hide
Query:  ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFA
        ATATSAIFVLLSGLCFLVFNSD+LMGRWLPILGLLAVAVV LMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFA
Subjt:  ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFA

Query:  ALFSFLAVLRSTEIDLLSSFSA
        ALFSFLAVLRSTEIDLLSSFSA
Subjt:  ALFSFLAVLRSTEIDLLSSFSA

A0A0A0LRZ2 Uncharacterized protein1.0e-5398.44Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTPTTATATSAIFVLLSGLCFLVFNSD+LMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIDLLSSFSA
        LAVAFAALFSFLAVLRSTEI LLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIDLLSSFSA

A0A5D3BFC5 Uncharacterized protein1.4e-5092.97Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTP TATATSAIFVLLSGLC++VFNSD+LMGRWLPILGLLAVA VALMAARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLASV+VKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIDLLSSFSA
        LAVAFAALFSF+AV RSTEIDLLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIDLLSSFSA

A0A6J1F5J3 uncharacterized protein LOC1114410295.9e-3372.8Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N  DLMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIDLLS
        L+AV FAA+ S +AV+RS EID LS
Subjt:  LLAVAFAALFSFLAVLRSTEIDLLS

A0A6J1KRU7 uncharacterized protein LOC1114981043.1e-3474.4Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N  DLMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL++V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIDLLS
        L+AVAFAA+ SF+AV+RS EID LS
Subjt:  LLAVAFAALFSFLAVLRSTEIDLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein1.2e-0641.03Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAV
        + G +++   A +A  A MV WI+V+VLLAF G  RRVLV + RKIT +V  ++  V++KE   +A   A L  F+ +
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAV

AT4G03600.1 unknown protein1.9e-0742.5Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAVLR
        + G +++     +A  A MV WI+V+VLLAF G  RRVLV +GRKIT +V  ++  V++KE  ++A   A L  FL + R
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAVLR

AT4G28330.1 unknown protein1.0e-0536.84Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL
        + G+L++A    +A  A +V WI+V+V +AFAG  R+ +V +GRK+T ++A ++  V++KE   +A+  A L  F+
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL

AT4G28340.1 unknown protein1.1e-0434.21Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL
        + G+L++A    +A  A +V WI+V+V +AF    R+ +V +GRK+T ++A Y+  V++KE   +A+  A +  F+
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL

AT5G50175.1 unknown protein6.9e-1046.94Show/hide
Query:  TTATATSAIFVLLSGLCFLVFNS-DDLMGRWLPILGLLAVAVVALM----AARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKE
        TT T +  IF + S        S  + + + L  +G    A ++L+    AARATMVAWITVLVLLAF+G RRRVL + G+ ITADVAM L  V+++E
Subjt:  TTATATSAIFVLLSGLCFLVFNS-DDLMGRWLPILGLLAVAVVALM----AARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATGATTTAATGGGGCGGTGGCTACCAAT
TCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCGTTCGCTGGAAACCGACGGCGAG
TTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGC
TTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATGATTTAATGGGGCGGTGGCTACCAAT
TCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCGTTCGCTGGAAACCGACGGCGAG
TTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGC
TTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAACTTCTTCTTTTCTTTCCTTTTCCTTTTCCTTTTCCGGAGAGATGAAATTTGGG
TGAATTTTACCGGTTTTGTAACGGTAAAAATTTATAATTAGGTTTTGGTTTCAAAACACTTACTTTAAAGTTTTAACATCAACACTCCGA
Protein sequenceShow/hide protein sequence
MLTPTTATATSAIFVLLSGLCFLVFNSDDLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFS
FLAVLRSTEIDLLSSFSA