; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G01310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G01310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHomeobox protein knotted-1, putative
Genome locationChr1:841072..846396
RNA-Seq ExpressionCSPI01G01310
SyntenyCSPI01G01310
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63576.2 hypothetical protein Csa_014294 [Cucumis sativus]1.8e-13895.6Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
        MAGLYSLNLLASNSHHSSSTTTLETLAIRM SSDYSHSL DFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ

Query:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
        KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVS DNEAASEEDISA
Subjt:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA

Query:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAEST
        RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKE LPKEAKQILLNWWNFHSQWPYPT + K  L   T
Subjt:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAEST

XP_004138104.1 homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus]8.1e-16898.71Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
        MAGLYSLNLLASNSHHSSSTTTLETLAIRM SSDYSHSL DFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ

Query:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
        KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVS DNEAASEEDISA
Subjt:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA

Query:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML
        RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKE LPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML
Subjt:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML

Query:  SLRGSLDHE
        SLRGSLDHE
Subjt:  SLRGSLDHE

XP_011656609.1 homeobox protein knotted-1-like 2 isoform X1 [Cucumis sativus]1.1e-16999.03Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
        MAGLYSLNLLASNSHHSSSTTTLETLAIRM SSDYSHSL DFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ

Query:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
        KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
Subjt:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA

Query:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML
        RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKE LPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML
Subjt:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML

Query:  SLRGSLDHE
        SLRGSLDHE
Subjt:  SLRGSLDHE

XP_011656688.1 homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus]2.5e-14095.97Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
        MAGLYSLNLLASNSHHSSSTTTLETLAIRM SSDYSHSL DFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ

Query:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
        KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
Subjt:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA

Query:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAEST
        RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKE LPKEAKQILLNWWNFHSQWPYPT + K  L   T
Subjt:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAEST

XP_038878657.1 homeobox protein knotted-1-like 6 [Benincasa hispida]1.7e-9665.59Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAI----RMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAF
        MA LY L+ LA +S+ SSS TTL++LA+     M S DYSH LP FESE   P SSAA +TA VA +++T  A + EESAG I+AKIASHPLYPKLVDAF
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAI----RMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAF

Query:  LNCQKVSAPPEVAKILDQYNRGNN-IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASE
        +NCQKV +PPE   I+DQ NRG++ IG E  GVST LG+DPELDEFM  +C +LAK  LDL QPL EAS+FL NME +LN+LC     GYVS  +EAASE
Subjt:  LNCQKVSAPPEVAKILDQYNRGNN-IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASE

Query:  EDISARGE-------VAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHR
        ED S  GE       V G++D ELK+RL RKYGGHI SLKQEFS+TK+KE+LP+EAKQILL WWN HSQWPYPTDTDK+ELAESTGLN+KQ+N+WFIN R
Subjt:  EDISARGE-------VAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHR

Query:  KRHWKLPSENM
        KRHWK  SENM
Subjt:  KRHWKLPSENM

TrEMBL top hitse value%identityAlignment
A0A0A0LU96 Uncharacterized protein3.9e-16898.71Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
        MAGLYSLNLLASNSHHSSSTTTLETLAIRM SSDYSHSL DFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQ

Query:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA
        KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVS DNEAASEEDISA
Subjt:  KVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISA

Query:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML
        RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKE LPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML
Subjt:  RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENML

Query:  SLRGSLDHE
        SLRGSLDHE
Subjt:  SLRGSLDHE

A0A6J1BZ15 homeobox protein knotted-1-like 6 isoform X21.6e-8960.9Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV
        M  LY L+L+A  SH SSS   LE+L    +       S+D SH LP F SE   P SSAAS+ A++ E ++ A A+ EEESA  IRAKIASHPLYPKL+
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV

Query:  DAFLNCQKVSAPPE-VAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEA
        +AF++CQKV APPE +  ILD+  R N+I     GVSTCLG DPELD FME +C +LAKY+LDL +PL EAS+FL NME QLN LC   TRGYVS +   
Subjt:  DAFLNCQKVSAPPE-VAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEA

Query:  ASEEDISA-----RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINH
         SEED+SA     +  +  N+DGELK+RLLRKY GHISSLK EFSKTKK   LPKEA+ ILL+WWN HS+WPYPT+ DKVELAESTGL++KQ+++WFIN 
Subjt:  ASEEDISA-----RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINH

Query:  RKRHWKLPSENM
        RKRHWK PSENM
Subjt:  RKRHWKLPSENM

A0A6J1BZH2 homeobox protein knotted-1-like 6 isoform X12.0e-8759.56Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV
        M  LY L+L+A  SH SSS   LE+L    +       S+D SH LP F SE   P SSAAS+ A++ E ++ A A+ EEESA  IRAKIASHPLYPKL+
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV

Query:  DAFLNCQ-------KVSAPPE-VAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGY
        +AF++CQ       KV APPE +  ILD+  R N+I     GVSTCLG DPELD FME +C +LAKY+LDL +PL EAS+FL NME QLN LC   TRGY
Subjt:  DAFLNCQ-------KVSAPPE-VAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGY

Query:  VSADNEAASEEDISA-----RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQL
        VS +    SEED+SA     +  +  N+DGELK+RLLRKY GHISSLK EFSKTKK   LPKEA+ ILL+WWN HS+WPYPT+ DKVELAESTGL++KQ+
Subjt:  VSADNEAASEEDISA-----RGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQL

Query:  NSWFINHRKRHWKLPSENM
        ++WFIN RKRHWK PSENM
Subjt:  NSWFINHRKRHWKLPSENM

A0A6J1EK44 homeobox protein knotted-1-like 61.1e-8860.38Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV
        MA LY L+ LA  S+ SSS   L+ L + ++       SSDYSH L  F S H    SS   + A+VA        +SEEESAG IR KIASHPLYP+LV
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV

Query:  DAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEA-
        DAF++CQK+ APPEVA IL +  RG++IG     VST LG DPELDEFME +C +LAKY+LDL  P  EAS+FL NME QLN LC  TTRGYVS +  A 
Subjt:  DAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEA-

Query:  ASEEDISARGEVA------GNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFIN
        +SEED+SA GEV        N+D ELK+RLLRKYGG++SSLKQEFSKTKKK  LPKE++QILL+WWN H +WPYPT+ DK+ELAESTGL+ KQ+N+WFIN
Subjt:  ASEEDISARGEVA------GNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFIN

Query:  HRKRHWKLPSENM
         RKRHWK  SENM
Subjt:  HRKRHWKLPSENM

A0A6J1KV29 homeobox protein knotted-1-like 62.4e-8858.65Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV
        MA LY L+ LA  S+ SSS   L+ L + ++       S+DYSH L  F S H    SS   + A+          +SEEESAG IR KIASHPLYP+LV
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD-------SSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLV

Query:  DAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAA
        DAF++CQK+ APPEVA IL +  RG +IG    GVSTCLG DPELDEFME +C +LAKY+LDL  P  EAS+FL NME QL+ LC  TTRGYVS +  A 
Subjt:  DAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAA

Query:  SEEDISARGEVA------GNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINH
        S E+ ++ GEV        N+D ELK+RLLRKYGG++SSLKQEFSKTKKK  LPKE++QILL+WWN H +WPYPT+ DK ELAESTGL+ KQ+N+WFIN 
Subjt:  SEEDISARGEVA------GNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINH

Query:  RKRHWKLPSENM
        RKRHWK  SENM
Subjt:  RKRHWKLPSENM

SwissProt top hitse value%identityAlignment
P46608 Homeobox protein SBH18.7e-5647.86Show/hide
Query:  SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQ--YNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLK
        S   S+  ++AKI +HP Y +L+ A++NCQKV APPEV   L++   +     G +    S+C+G DP LD+FME +CE+L KYE +L +PL+EA  FL+
Subjt:  SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQ--YNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLK

Query:  NMERQLNLLCEDTT--RGYVSADNEAASEEDISARGEVAGN-KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTD
         +E Q   L   ++        D   +SEED+     +    +D +LK +LLRKY G++ SLKQEF K +KK  LPKEA+Q LL WWN H +WPYP+++ 
Subjt:  NMERQLNLLCEDTT--RGYVSADNEAASEEDISARGEVAGN-KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTD

Query:  KVELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        K+ LAESTGL++KQ+N+WFIN RKRHWK PSE+M
Subjt:  KVELAESTGLNRKQLNSWFINHRKRHWKLPSENM

P46640 Homeobox protein knotted-1-like 22.9e-6746.53Show/hide
Query:  STTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRG
        ST      A  M  SDY   +     ++   F S    TA+ +E +       +  S  VI++KIASHPLYP+L+  +++CQKV AP E+A IL++  R 
Subjt:  STTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRG

Query:  NNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED-------TTRGYVSADNEAASEEDISARGEVAGNKDGE
        N++   +    +C G DPELDEFME +C++L KY+ DL +P +EA+ F+  +E QL  LC         +  G VS+D E   ++DI+A      + D +
Subjt:  NNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED-------TTRGYVSADNEAASEEDISARGEVAGNKDGE

Query:  LKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        LK++LLRK+G HISSLK EFSK KKK  LP+EA+Q LL+WWN H++WPYPT+ DK+ LAE TGL++KQ+N+WFIN RKRHWK PSENM
Subjt:  LKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM

Q38874 Homeobox protein SHOOT MERISTEMLESS8.7e-5647.48Show/hide
Query:  SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNM
        S   S+  ++AKI +HP Y +L+ A++NCQKV APPEV   L++          + G + CLG DP LD+FME +CE+L KYE +L +P +EA  FL+ +
Subjt:  SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNM

Query:  E---RQLNLLCEDTTRGY----VSADNEAASEEDISARGEVAG--NKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYP
        E   + L+L    +  GY    +  +N  +SEE++    E      +D ELK +LLRKY G++ SLKQEF K +KK  LPKEA+Q LL+WW+ H +WPYP
Subjt:  E---RQLNLLCEDTTRGY----VSADNEAASEEDISARGEVAG--NKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYP

Query:  TDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        ++  K+ LAESTGL++KQ+N+WFIN RKRHWK PSE+M
Subjt:  TDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM

Q84JS6 Homeobox protein knotted-1-like 69.6e-6344.94Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD------SSDYSHSLPD-FESEHFL--PFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPK
        M G+Y+ +     S  S    + E+L    D      SS   + + D F S+  L    S+ +S  A +A +++      +  S  VI+AKIA HP YP+
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD------SSDYSHSLPD-FESEHFL--PFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPK

Query:  LVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE--DTTRGYVSAD
        L+ A+++CQKV APPE+A +L++  R +++  +    S+C G DPELDEFME +C++L KY+ DL +P +EA+ FL  +E QL  LC   ++ RG VS D
Subjt:  LVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE--DTTRGYVSAD

Query:  NEAASEEDISARG-EVAGN-----KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSW
           +S+E++S    EVA +     +D +LK+RLLRK+G  IS+LK EFSK KKK  LP+EA+Q LL+WWN H +WPYPT+ DK+ LA++TGL++KQ+N+W
Subjt:  NEAASEEDISARG-EVAGN-----KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSW

Query:  FINHRKRHWKLPSENM
        FIN RKRHWK PSENM
Subjt:  FINHRKRHWKLPSENM

Q9M6D9 Homeobox protein SHOOT MERISTEMLESS1.4e-5347.64Show/hide
Query:  SAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQL
        S+ +++AKI +HP Y +L+ A++NCQKV APPEV   L++          + G +  LG DP LD+FME +CE+L KYE +L +P +EA  FL+++E Q 
Subjt:  SAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQL

Query:  N--LLCEDTTRGY----VSADNEAASEEDISARGEVAG--NKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDK
            L   ++ GY    +  +N  +SEE++    E      +D ELK +LLRKY G++ SLKQEF K +KK  LPKEA+Q LL+WW+ H +WPYP++  K
Subjt:  N--LLCEDTTRGY----VSADNEAASEEDISARGEVAG--NKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDK

Query:  VELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        + LAESTGL++KQ+N+WFIN RKRHWK PSE+M
Subjt:  VELAESTGLNRKQLNSWFINHRKRHWKLPSENM

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 66.9e-6444.94Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD------SSDYSHSLPD-FESEHFL--PFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPK
        M G+Y+ +     S  S    + E+L    D      SS   + + D F S+  L    S+ +S  A +A +++      +  S  VI+AKIA HP YP+
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD------SSDYSHSLPD-FESEHFL--PFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPK

Query:  LVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE--DTTRGYVSAD
        L+ A+++CQKV APPE+A +L++  R +++  +    S+C G DPELDEFME +C++L KY+ DL +P +EA+ FL  +E QL  LC   ++ RG VS D
Subjt:  LVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE--DTTRGYVSAD

Query:  NEAASEEDISARG-EVAGN-----KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSW
           +S+E++S    EVA +     +D +LK+RLLRK+G  IS+LK EFSK KKK  LP+EA+Q LL+WWN H +WPYPT+ DK+ LA++TGL++KQ+N+W
Subjt:  NEAASEEDISARG-EVAGN-----KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSW

Query:  FINHRKRHWKLPSENM
        FIN RKRHWK PSENM
Subjt:  FINHRKRHWKLPSENM

AT1G23380.2 KNOTTED1-like homeobox gene 62.2e-6244.65Show/hide
Query:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD------SSDYSHSLPD-FESEHFL--PFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPK
        M G+Y+ +     S  S    + E+L    D      SS   + + D F S+  L    S+ +S  A +A +++      +  S  VI+AKIA HP YP+
Subjt:  MAGLYSLNLLASNSHHSSSTTTLETLAIRMD------SSDYSHSLPD-FESEHFL--PFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPK

Query:  LVDAFLNCQK--VSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE--DTTRGYVS
        L+ A+++CQK  V APPE+A +L++  R +++  +    S+C G DPELDEFME +C++L KY+ DL +P +EA+ FL  +E QL  LC   ++ RG VS
Subjt:  LVDAFLNCQK--VSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE--DTTRGYVS

Query:  ADNEAASEEDISARG-EVAGN-----KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLN
         D   +S+E++S    EVA +     +D +LK+RLLRK+G  IS+LK EFSK KKK  LP+EA+Q LL+WWN H +WPYPT+ DK+ LA++TGL++KQ+N
Subjt:  ADNEAASEEDISARG-EVAGN-----KDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLN

Query:  SWFINHRKRHWKLPSENM
        +WFIN RKRHWK PSENM
Subjt:  SWFINHRKRHWKLPSENM

AT1G62360.1 KNOX/ELK homeobox transcription factor6.2e-5747.48Show/hide
Query:  SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNM
        S   S+  ++AKI +HP Y +L+ A++NCQKV APPEV   L++          + G + CLG DP LD+FME +CE+L KYE +L +P +EA  FL+ +
Subjt:  SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNM

Query:  E---RQLNLLCEDTTRGY----VSADNEAASEEDISARGEVAG--NKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYP
        E   + L+L    +  GY    +  +N  +SEE++    E      +D ELK +LLRKY G++ SLKQEF K +KK  LPKEA+Q LL+WW+ H +WPYP
Subjt:  E---RQLNLLCEDTTRGY----VSADNEAASEEDISARGEVAG--NKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYP

Query:  TDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        ++  K+ LAESTGL++KQ+N+WFIN RKRHWK PSE+M
Subjt:  TDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 22.1e-6846.53Show/hide
Query:  STTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRG
        ST      A  M  SDY   +     ++   F S    TA+ +E +       +  S  VI++KIASHPLYP+L+  +++CQKV AP E+A IL++  R 
Subjt:  STTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRG

Query:  NNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED-------TTRGYVSADNEAASEEDISARGEVAGNKDGE
        N++   +    +C G DPELDEFME +C++L KY+ DL +P +EA+ F+  +E QL  LC         +  G VS+D E   ++DI+A      + D +
Subjt:  NNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED-------TTRGYVSADNEAASEEDISARGEVAGNKDGE

Query:  LKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        LK++LLRK+G HISSLK EFSK KKK  LP+EA+Q LL+WWN H++WPYPT+ DK+ LAE TGL++KQ+N+WFIN RKRHWK PSENM
Subjt:  LKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana2.1e-5245.11Show/hide
Query:  IRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNE--NPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNL
        ++AKI +HP Y  L+ A+L+CQK+ APP+V   +    +      +   P VS     DPELD+FME +C++L KY  +L +P++EA  F++ +E QL++
Subjt:  IRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNNIGNE--NPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNL

Query:  LCEDTTRGYVSADNEAAS------EEDISARGEV------AGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDT
        LC+       + D ++ +      E++ ++ GE          +D ELK  LL+KY G++SSLKQE SK KKK  LPKEA+Q LL WW  H +WPYP+++
Subjt:  LCEDTTRGYVSADNEAAS------EEDISARGEV------AGNKDGELKERLLRKYGGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDT

Query:  DKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM
        +KV LAESTGL++KQ+N+WFIN RKRHWK PSE+M
Subjt:  DKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTCTTTACAGTCTCAATCTCCTCGCCAGTAACTCTCATCACTCATCTTCAACGACCACGTTGGAGACGCTTGCCATTCGGATGGATTCTTCCGATTATTCTCA
CTCTCTTCCGGATTTCGAATCGGAACATTTCCTGCCGTTTTCGTCGGCGGCCTCCAACACTGCTATTGTGGCGGAGAAGATGAAAACAGCTTGTGCTATTTCCGAGGAGG
AGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCAGCGCACCGCCGGAAGTTGCTAAA
ATTCTAGACCAATACAACCGTGGTAATAACATCGGCAATGAAAATCCCGGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTTGACGAATTCATGGAAATATTCTGCGA
GCTATTAGCCAAATACGAGTTGGATCTGTATCAGCCGTTGGAGGAAGCATCTGCCTTCCTTAAGAACATGGAAAGGCAGTTAAACTTGCTCTGTGAGGACACAACCAGAG
GCTACGTTTCCGCAGACAATGAAGCTGCCTCGGAAGAGGATATAAGCGCGCGGGGAGAAGTAGCAGGAAATAAAGATGGTGAGCTGAAGGAACGACTTCTACGCAAGTAT
GGTGGTCATATTAGTAGCCTGAAGCAGGAATTCTCAAAAACAAAAAAGAAGGAAAGTCTACCAAAAGAAGCCAAACAGATTCTGCTTAACTGGTGGAACTTTCATTCCCA
ATGGCCTTACCCCACTGACACAGACAAAGTCGAGTTAGCGGAGTCCACAGGCTTAAACCGAAAACAGCTAAACAGCTGGTTCATAAATCATAGGAAACGGCATTGGAAAT
TACCATCGGAAAACATGCTGTCTTTACGCGGTTCCCTTGATCATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTCTTTACAGTCTCAATCTCCTCGCCAGTAACTCTCATCACTCATCTTCAACGACCACGTTGGAGACGCTTGCCATTCGGATGGATTCTTCCGATTATTCTCA
CTCTCTTCCGGATTTCGAATCGGAACATTTCCTGCCGTTTTCGTCGGCGGCCTCCAACACTGCTATTGTGGCGGAGAAGATGAAAACAGCTTGTGCTATTTCCGAGGAGG
AGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCAGCGCACCGCCGGAAGTTGCTAAA
ATTCTAGACCAATACAACCGTGGTAATAACATCGGCAATGAAAATCCCGGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTTGACGAATTCATGGAAATATTCTGCGA
GCTATTAGCCAAATACGAGTTGGATCTGTATCAGCCGTTGGAGGAAGCATCTGCCTTCCTTAAGAACATGGAAAGGCAGTTAAACTTGCTCTGTGAGGACACAACCAGAG
GCTACGTTTCCGCAGACAATGAAGCTGCCTCGGAAGAGGATATAAGCGCGCGGGGAGAAGTAGCAGGAAATAAAGATGGTGAGCTGAAGGAACGACTTCTACGCAAGTAT
GGTGGTCATATTAGTAGCCTGAAGCAGGAATTCTCAAAAACAAAAAAGAAGGAAAGTCTACCAAAAGAAGCCAAACAGATTCTGCTTAACTGGTGGAACTTTCATTCCCA
ATGGCCTTACCCCACTGACACAGACAAAGTCGAGTTAGCGGAGTCCACAGGCTTAAACCGAAAACAGCTAAACAGCTGGTTCATAAATCATAGGAAACGGCATTGGAAAT
TACCATCGGAAAACATGCTGTCTTTACGCGGTTCCCTTGATCATGAATGA
Protein sequenceShow/hide protein sequence
MAGLYSLNLLASNSHHSSSTTTLETLAIRMDSSDYSHSLPDFESEHFLPFSSAASNTAIVAEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAK
ILDQYNRGNNIGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCEDTTRGYVSADNEAASEEDISARGEVAGNKDGELKERLLRKY
GGHISSLKQEFSKTKKKESLPKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENMLSLRGSLDHE