; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G01560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G01560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNHL domain protein
Genome locationChr1:1055163..1056182
RNA-Seq ExpressionCSPI01G01560
SyntenyCSPI01G01560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057881.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]1.3e-9093.75Show/hide
Query:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG
        MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGG
Subjt:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG

Query:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        CGG G GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

KAG7023141.1 hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-7379.1Show/hide
Query:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
        MA+ D EE  P C+A  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVH+EGRWW RGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+G  
Subjt:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC

Query:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA
           G GGGGG+  R GKF YDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  K++S VA
Subjt:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA

XP_008453108.1 PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo]8.6e-9093.18Show/hide
Query:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG
        MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGG
Subjt:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG

Query:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        CGG   GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

XP_011657987.1 uncharacterized protein LOC105435925 [Cucumis sativus]2.3e-98100Show/hide
Query:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
        MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
Subjt:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC

Query:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
Subjt:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

XP_038878924.1 uncharacterized protein LOC120071012 [Benincasa hispida]1.6e-8389.27Show/hide
Query:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
        MAFTDVEEESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVH+EGRWW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS   
Subjt:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC

Query:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA
              GGGG GVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT  K+VS+VA
Subjt:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA

TrEMBL top hitse value%identityAlignment
A0A0A0LUB2 Uncharacterized protein1.1e-98100Show/hide
Query:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
        MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
Subjt:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC

Query:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
Subjt:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

A0A1S3BVG0 uncharacterized protein LOC1034939214.2e-9093.18Show/hide
Query:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG
        MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGG
Subjt:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG

Query:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        CGG   GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

A0A5A7UWM1 Putative Serine/arginine repetitive matrix protein 26.4e-9193.75Show/hide
Query:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG
        MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGG
Subjt:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG

Query:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        CGG G GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

A0A5D3BK38 Putative Serine/arginine repetitive matrix protein 24.2e-9093.18Show/hide
Query:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG
        MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGG
Subjt:  MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG

Query:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
        CGG   GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  CGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA

A0A6J1JH52 uncharacterized protein LOC1114856661.0e-7278.53Show/hide
Query:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC
        MA+ D EE  P  +AD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVH+EGRWW RGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+G  
Subjt:  MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGC

Query:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA
           G GGGG +  R GKFQYDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  K++S VA
Subjt:  GGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)9.4e-2642.86Show/hide
Query:  DKSNSLLPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNR-NRSGG--------CGGCG
        D  +  L   R  CF + C  S + +T G S WW+RI    ++  + RWW RG R   ++REWSE+VAGPRWKT+IRRF R N  GG         GGCG
Subjt:  DKSNSLLPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNR-NRSGG--------CGGCG

Query:  SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT
         G         GKF+YD LSY++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Subjt:  SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT

AT3G48020.1 unknown protein1.5e-2347.76Show/hide
Query:  TVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDD
        TV  SWW+RI  +  H E RWW   VR  LK+REWSEIVAGPRWKTFIRRFNR+   G     S           KF+YDP+SY ++F++  +     DD
Subjt:  TVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDD

Query:  DIDDFNGYRNFSARYASIP-APLKTGGTKNVSAV
        D     G R+FS RYAS+P A  K+    +V AV
Subjt:  DIDDFNGYRNFSARYASIP-APLKTGGTKNVSAV

AT5G14890.1 NHL domain-containing protein1.5e-2340.91Show/hide
Query:  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGG--GGGS
        D+ +  +   R  CF L C GS + +   G  WW+RIR   ++  + RWW  G    +K+REWSEIVAGP+WKTFIRRF RN       C +GG  GG +
Subjt:  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGG--GGGS

Query:  GVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT
              F+YD  SY++NFD+G +Q G  +D+      YR++S R+A+   P+ T
Subjt:  GVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT

AT5G25240.1 unknown protein3.1e-0535.9Show/hide
Query:  QVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEG
        Q    G W   G   L  L+E SE +AGP+WK FIR F+  R                 R   F YD  +Y++NFD+G
Subjt:  QVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEG

AT5G62865.1 unknown protein1.7e-2246.9Show/hide
Query:  RCGCFRLSCFGSRRVATVGPSWWERIRASQVHN-------EGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKF
        RC CF  S   SR    VG S W RIR     N       E RWW   +R  LK+REWSEIVAGPRWKTFIRRFNR+   G     S           KF
Subjt:  RCGCFRLSCFGSRRVATVGPSWWERIRASQVHN-------EGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKF

Query:  QYDPLSYAMNFDEGSRQIGELDDDIDDF---NGYRNFSARYASIP
        QYDPLSY++NFD+        DD+ D++    G R+FS R+AS+P
Subjt:  QYDPLSYAMNFDEGSRQIGELDDDIDDF---NGYRNFSARYASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTGTTGTGACGCTGATAAATCCAATTCTTTGTTGCCGACTGCCCGGTGCGGTTGTTTTCGGCTATCGTGTTTTGGATC
CCGTCGTGTAGCCACTGTTGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGACCAGAGGGGTTAGGGTTCTTTTGAAGCTCC
GTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGGAGTGGTGGTTGTGGTGGTTGTGGTAGTGGTGGTGGTGGTGGA
AGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCCTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAA
TGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACGGGAGGAACTAAGAATGTTTCTGCCGTCGCGTAA
mRNA sequenceShow/hide mRNA sequence
AGTCACACAGGTCATAGATGGTTTTCTGTTTCATTTTTGCTTTTTGGTGTATAAAGTTGGTAATGAGAATAACTCATAGTGAAATCCGATTATGGCGTTTACTGATGTAG
AAGAAGAGTCTCCTTGTTGTGACGCTGATAAATCCAATTCTTTGTTGCCGACTGCCCGGTGCGGTTGTTTTCGGCTATCGTGTTTTGGATCCCGTCGTGTAGCCACTGTT
GGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGACCAGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGT
TGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGGAGTGGTGGTTGTGGTGGTTGTGGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGA
AATTTCAATATGATCCCTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCT
GCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACGGGAGGAACTAAGAATGTTTCTGCCGTCGCGTAAAGGTGCGCTGTGTTTAATAAAATACGCCGTGTTTAGTGTTG
TTATTGTCCACACATTTGGGCTGGCTGACATCACCGCCGCCACCGCCGCCACCACCACCTCCTCCGTTAGATTTTTCTTGTTTTCTTTTTTAATTCTCAAAAGTAAATAC
ATGTTTGAGTTAATTTTGGACTTTCCTTTCTCTTTCTTCCTTATGGTATTGGTGGCACATCAGGATCAATGTACAATACGATAAGAGTGGGTCTTTTTCTTTAAAAAACT
ATTCTTTTATATTAAATTATATCCTAATAGTATATAATAATACTGATTGGGGGACTTGCTTTGTTTTATGTGGGGGTTAAATAAAAAGGTCATATAATGTTTGTATATGT
ATTGTCCTTGTATGAATTGGAAAATGGTTA
Protein sequenceShow/hide protein sequence
MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGG
SGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA