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CSPI01G01680 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G01680
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationChr1:1120897..1124711
RNA-Seq ExpressionCSPI01G01680
SyntenyCSPI01G01680
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138127.1 succinate dehydrogenase subunit 7B, mitochondrial isoform X1 [Cucumis sativus]6.1e-48100Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
        MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS

Query:  T
        T
Subjt:  T

XP_008453123.1 PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like [Cucumis melo]6.6e-4293.14Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSG
        MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTGS 
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSG

Query:  ST
        ST
Subjt:  ST

XP_022135509.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia]8.6e-4290.1Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
        MAFFLN++TLASHFRSQSQ DPSSLSRRGFHVEPGTREKALLAEDP LRRFRSHKK VSR+KR+GD+LTIVVVAGCCYEIYVKATMREEA RQAKT SGS
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS

Query:  T
        T
Subjt:  T

XP_031741717.1 succinate dehydrogenase subunit 7B, mitochondrial isoform X2 [Cucumis sativus]7.5e-46100Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
        MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG

XP_038880267.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Benincasa hispida]5.0e-4289.11Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
        MAFFLNK+TLASHFRSQSQVDPSSLSRRGFHVEPG REKALLAEDP LRRF+SHKK VSR+KR+GD+LTIVVVAG CYEIYVKATMREEAR+QAKT SGS
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A0A0LUC0 Uncharacterized protein3.6e-46100Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
        MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG

A0A1S3BW83 succinate dehydrogenase subunit 7B, mitochondrial-like3.2e-4293.14Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSG
        MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTGS 
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSG

Query:  ST
        ST
Subjt:  ST

A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like4.1e-4290.1Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
        MAFFLN++TLASHFRSQSQ DPSSLSRRGFHVEPGTREKALLAEDP LRRFRSHKK VSR+KR+GD+LTIVVVAGCCYEIYVKATMREEA RQAKT SGS
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS

Query:  T
        T
Subjt:  T

A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like6.6e-4088.12Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
        MAF LNK+ LAS FRSQSQVDPSSLSRRGFHVEPGTREKALLAEDP LRRFRSHKK VSR+K++GDVLTIVVVAGCCYEIYVKATMREEA RQA T SGS
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS

Query:  T
        T
Subjt:  T

A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like4.6e-4188.12Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS
        MAF LNK+TLASHFRSQSQ DPS+LSRRGFHVEPGTREKALLAEDP LRRFRSHKK VSR+K++GDVLTIVVVAGCCYEIYV+ATMREEA RQAKT SGS
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial1.6e-3065.66Show/hide
Query:  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT
        MAF LN ++++SH RS S     D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Subjt:  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT

Q6H611 Succinate dehydrogenase subunit 7, mitochondrial1.3e-1148.15Show/hide
Query:  STLASHFRSQSQVDPS----SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKA
        S L S  RS     P+       RRGFHVE G REKALL ED  L+RF+S+K +V ++ +VG++LT VV+  C YEI   A
Subjt:  STLASHFRSQSQVDPS----SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKA

Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial8.9e-2668.82Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR
        MAF LN S ++SH RS SQ    +L  SRRGFHVE G REKALLAED  LRRF+SHKK V RLKR+GDVLT+VVVAGCCYEIY +  MR+EA+
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR

Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein6.3e-2768.82Show/hide
Query:  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR
        MAF LN S ++SH RS SQ    +L  SRRGFHVE G REKALLAED  LRRF+SHKK V RLKR+GDVLT+VVVAGCCYEIY +  MR+EA+
Subjt:  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR

AT5G62575.1 unknown protein8.6e-3266.33Show/hide
Query:  MAFFLNKSTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT
        MAF LN ++++SH RS S    D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Subjt:  MAFFLNKSTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT

AT5G62575.2 unknown protein1.1e-3165.66Show/hide
Query:  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT
        MAF LN ++++SH RS S     D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Subjt:  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCG
TGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTG
CAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCG
TGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTG
CAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACA
Protein sequenceShow/hide protein sequence
MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST