; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G02230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G02230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L34
Genome locationChr1:1453708..1455570
RNA-Seq ExpressionCSPI01G02230
SyntenyCSPI01G02230
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5599.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]5.6e-56100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]1.6e-5599.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]1.2e-5599.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]1.6e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

TrEMBL top hitse value%identityAlignment
A0A0A0LK03 Uncharacterized protein2.7e-56100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A0A0LP37 Uncharacterized protein6.0e-5699.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGV+SGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A1S3BV34 60S ribosomal protein L342.7e-56100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A5A7UWQ0 60S ribosomal protein L342.7e-56100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A6P6V549 60S ribosomal protein L346.0e-5699.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L342.2e-5593.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQK KEK A+K+
Subjt:  KIVKKVLKIQKAKEKLASKS

P41098 60S ribosomal protein L344.0e-5795.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

Q42351 60S ribosomal protein L34-12.2e-5592.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLASKS

Q9FE65 60S ribosomal protein L34-21.1e-5492.44Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLASK

Q9LJW6 60S ribosomal protein L34-39.3e-5490.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLASKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.6e-5692.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLASKS

AT1G26880.2 Ribosomal protein L34e superfamily protein6.8e-4492.39Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII

AT1G69620.1 ribosomal protein L347.8e-5692.44Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLASK

AT3G28900.1 Ribosomal protein L34e superfamily protein6.6e-5590.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLASKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTCGTGAAAACCCCTGGTGGGAAGCTTGTGTATCAGACTACCAAGAA
AAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGATTAGCTAGGAACCGCAGGACTG
TGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTCTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAG
AAGGCTAAGGAAAAACTGGCATCAAAGAGCTAA
mRNA sequenceShow/hide mRNA sequence
AACGCGTACTAACCGTCAGATCTAGGGCAACTAGGTATTTTATCTCATCCTCCAATGTTGAGTACAAGTCTCTGCAGCAGCCTCCACTCCCAGAGCAGCGAAGAAGAGAG
GAAGAATCATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTCGTGAAAACCCCTGGTGGGAAGCTTGTGTATCAGACT
ACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGATTAGCTAGGAACCG
CAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTCTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGA
AGATTCAGAAGGCTAAGGAAAAACTGGCATCAAAGAGCTAAATTGATTATGTTTGTGGTTTTGTTTTTAGAAAATCGATGAAATTTTGACGTTTTTGTGATGTGATGCTG
AATTTTAGCGATTACTATTTAAAGTTTGTTTTTGGAAGAACGATGTAGAAGATGTCAAAGTATTTGACTGTTTTTAGCATTTGAGTTAATTGAAGATTTAATTGAAGACA
ACATGTGGTATATAAGCTTTGATTTAATATTGAATTAAGAAAGTCAGTTGAGAAGCATAAGCAGTAAGCAAC
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQ
KAKEKLASKS