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CSPI01G02250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G02250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionmini zinc finger
Genome locationChr1:1468015..1468866
RNA-Seq ExpressionCSPI01G02250
SyntenyCSPI01G02250
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652416.1 hypothetical protein Csa_013396 [Cucumis sativus]5.6e-43100Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV
        MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVV

XP_004138166.1 mini zinc finger protein 3 [Cucumis sativus]4.0e-49100Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

XP_008453204.1 PREDICTED: mini zinc finger protein 3-like [Cucumis melo]2.2e-4797.92Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKRLVVV+KSDGSNGRRNHHWS SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Subjt:  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]2.2e-3987.37Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

XP_038880256.1 mini zinc finger protein 3 [Benincasa hispida]6.0e-4594.74Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKRLVVV+KSDGS+GRRNH+ SSSGS VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

TrEMBL top hitse value%identityAlignment
A0A0A0LSA6 ZF-HD dimerization-type domain-containing protein2.0e-49100Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

A0A1S3BWG1 mini zinc finger protein 3-like1.1e-4797.92Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKRLVVV+KSDGSNGRRNHHWS SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Subjt:  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

A0A5A7UWS7 Mini zinc finger protein 3-like1.1e-4797.92Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKRLVVV+KSDGSNGRRNHHWS SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
Subjt:  MKKRLVVVRKSDGSNGRRNHHWS-SSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

A0A6J1E6Q9 mini zinc finger protein 3-like1.1e-3987.37Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

A0A6J1J9R5 mini zinc finger protein 3-like2.4e-3986.32Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRR+VDAEVVFEYSPPNS+
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 11.6e-1976.36Show/hide
Query:  VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA
        VRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+A
Subjt:  VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA

Q2Q493 Mini zinc finger protein 33.7e-2966.32Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKR VV+++   S     +  +SS S VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAACGCHRNFHRREVD EVV EYSPPN+N
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

Q2RB28 Mini zinc finger protein 11.6e-1976.36Show/hide
Query:  VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA
        VRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+A
Subjt:  VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA

Q9CA51 Mini zinc finger protein 12.8e-2963.73Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHW-----SSSGSE---VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPP
        MKKR +V+ K    N   +  W     SSS SE   VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD EVV EYSPP
Subjt:  MKKRLVVVRKSDGSNGRRNHHW-----SSSGSE---VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPP

Query:  NS
        N+
Subjt:  NS

Q9LJW5 Mini zinc finger protein 21.6e-2458.76Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGS--EVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV+R++      R+   +SS +   VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGS--EVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger2.6e-3066.32Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN
        MKKR VV+++   S     +  +SS S VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL CAACGCHRNFHRREVD EVV EYSPPN+N
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN

AT1G74660.1 mini zinc finger 12.0e-3063.73Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHW-----SSSGSE---VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPP
        MKKR +V+ K    N   +  W     SSS SE   VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD EVV EYSPP
Subjt:  MKKRLVVVRKSDGSNGRRNHHW-----SSSGSE---VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPP

Query:  NS
        N+
Subjt:  NS

AT2G18350.1 homeobox protein 243.5e-1957.35Show/hide
Query:  SSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYS
        ++S  + RY ECQKNHAA  GG  VDGC EFM+ GE+GT E+L CAAC CHR+FHR+E+D   V  ++
Subjt:  SSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYS

AT3G28917.1 mini zinc finger 21.1e-2558.76Show/hide
Query:  MKKRLVVVRKSDGSNGRRNHHWSSSGS--EVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV+R++      R+   +SS +   VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRLVVVRKSDGSNGRRNHHWSSSGS--EVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNS

AT4G24660.1 homeobox protein 224.2e-2067.24Show/hide
Query:  GSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA
        G+++RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGCHRNFHR+E ++
Subjt:  GSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGCTGGTGGTGGTGAGGAAATCTGATGGCTCTAACGGGCGACGAAACCACCACTGGTCCAGTTCGGGATCGGAGGTGCGGTACGCAGAGTGCCAGAAGAA
TCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGATGCCGAGAATTCATGGCAAGAGGAGAGGATGGGACTGAGGAGGCTCTGAATTGTGCTGCTTGTGGTTGCCACA
GGAATTTTCATAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAATTAA
mRNA sequenceShow/hide mRNA sequence
TGCCAAAATAAGCTTGTGTGTTTCTGTTCTATCTTCCTTATTAATTTTCTCCTCTCTCTTTCCATTAATCTAAACCCATATATAAATAAACTCTCTCTTAGGGTTAGGGT
TATGTTGTTAGTTCTCCTTTGCTGAGAATTCCCTAAAGAACAAAAAAAAGAGAGAAAGCTTTCTCCTTTTTTCCCTTTGTAAATTTGAACAACCACCAAAATCAGCAAAG
ATTGGTGGGTTTAGAGCTTTAGGGGATTCCAAAACCATGAAGAAAAGGCTGGTGGTGGTGAGGAAATCTGATGGCTCTAACGGGCGACGAAACCACCACTGGTCCAGTTC
GGGATCGGAGGTGCGGTACGCAGAGTGCCAGAAGAATCACGCGGCGAAGCTCGGGGGGTTCGCGGTGGACGGATGCCGAGAATTCATGGCAAGAGGAGAGGATGGGACTG
AGGAGGCTCTGAATTGTGCTGCTTGTGGTTGCCACAGGAATTTTCATAGAAGGGAGGTTGATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAATTAATTTTTA
TTTAATTGAAAGGATCATCAAATCATCAATCATCATCATAAAAACTTCAAATTGACTAAAAGGGTTTGTGTTTTATGTATAATGTTTTCTATGGTCTGGTTTTTCTTTGA
TTTTTAGTTTTGCATTTTGATCATGTAAATCTGATCATCAGTAACCAAACATTATATGATGGATTATTGGAGAAGGAAAAATTAGAAAGAAAAAGAAAAAACAAATATTA
ATAATTTGATTTTCAGTTTTTGTTTTTTTGGTTCTTGCTTTTCTTCAAGAATATATTGATTCAAGGGTTTCTCTCTTTATTA
Protein sequenceShow/hide protein sequence
MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN