; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G02270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G02270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein EMBRYO DEFECTIVE 514
Genome locationChr1:1476410..1478716
RNA-Seq ExpressionCSPI01G02270
SyntenyCSPI01G02270
Gene Ontology termsGO:0017126 - nucleologenesis (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453205.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]2.3e-11493.53Show/hide
Query:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
        MAEETIPQLDPEVTNSGTEDMELETT PK S+DA+EA EAAPVINGDA SKREREESADDGV DGKKQKIEKSVEEER+EKLGGDGKCEEEPVPVSLGPK
Subjt:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK

Query:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
        SFRSSVELFDYFYKILH+WP+NLNVNQYEQMVLVDLLKKGHLEPEKKIGCGI +FQIRFHP WKSKCFFLIREDESADDFSFRKCVDHILPLPENFK K 
Subjt:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF

Query:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
Subjt:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

XP_011660085.1 protein EMBRYO DEFECTIVE 514 [Cucumis sativus]7.8e-12399.57Show/hide
Query:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
        MAEETIPQLDPEVTNSGTEDMELETTEPKASTDA+EANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
Subjt:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK

Query:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
        SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
Subjt:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF

Query:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
Subjt:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

XP_022135230.1 protein EMBRYO DEFECTIVE 514 [Momordica charantia]2.2e-8575.11Show/hide
Query:  MAEETIPQL---DPEVTNSGTEDMELETT----EPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEP
        MAEET PQL   DPEVTNS TEDMELET+    EPK     +EANEAAP  NGDA SKRER EE+AD+ + + KK K+EKSVEEER+EK+ GDGK +E+ 
Subjt:  MAEETIPQL---DPEVTNSGTEDMELETT----EPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEP

Query:  VPVSLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPL
         PVSLGPKSF SSVE+FDYFYK LH+WP NLN+N+YEQMVL++LLKKGH+EPEKKIGCGIH+FQIR HP +KSKC+FLIREDES DDFSFRKCVDHILPL
Subjt:  VPVSLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPL

Query:  PENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGR
        PEN K K DANRALGG KHRGGGRGGGGGRGRGG  R
Subjt:  PENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGR

XP_022933555.1 protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]3.8e-8575Show/hide
Query:  MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVS
        MAEETIPQL    PEVTNS  EDMELE+TEPK S   ++ANEAAPV NGDA SKRER EE ADD   + KK K+EKSVEEERLEK+  DGK EEE  PVS
Subjt:  MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVS

Query:  LGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENF
        LGPKSF SSVELFDYFY  LH+WP NLNVNQYE MVL+DL+KKGH+EP+KKIGCG+ + QIR+HP WKSKCFFLIRED SADDFSFRKCVDHILPLPEN 
Subjt:  LGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENF

Query:  KGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        K   DANRALGGGKHRGG        GRGGGGRWRN
Subjt:  KGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

XP_038880608.1 protein EMBRYO DEFECTIVE 514 [Benincasa hispida]1.5e-10286.67Show/hide
Query:  MAEETIPQL---DPEVTNSGTEDMELETTEP----KASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKC-EEE
        MAEETIPQL   DP VTNSGTEDMELETTEP    K ST+ +EA EA PV NGD+TSKRER EESADDGV DGKKQKIEKSVEEER EK+GGDGK  EEE
Subjt:  MAEETIPQL---DPEVTNSGTEDMELETTEP----KASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKC-EEE

Query:  PVPVSLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILP
        PV VSLGPKSF+SS+ELFDYFYKILHHWPVNLNVNQYEQM LVDLLKKGH+EPEKKIGCGIH+FQIR+HP WKSKCFFLIREDESADDFSFRKCVDHILP
Subjt:  PVPVSLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILP

Query:  LPENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWR
        LPENFKGK DANRALGGGKHRGGGRGGGGGRGR GGGRWR
Subjt:  LPENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWR

TrEMBL top hitse value%identityAlignment
A0A0A0LRN9 Uncharacterized protein3.8e-12399.57Show/hide
Query:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
        MAEETIPQLDPEVTNSGTEDMELETTEPKASTDA+EANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
Subjt:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK

Query:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
        SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
Subjt:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF

Query:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
Subjt:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

A0A1S3BWT9 protein DCL, chloroplastic1.1e-11493.53Show/hide
Query:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
        MAEETIPQLDPEVTNSGTEDMELETT PK S+DA+EA EAAPVINGDA SKREREESADDGV DGKKQKIEKSVEEER+EKLGGDGKCEEEPVPVSLGPK
Subjt:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK

Query:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
        SFRSSVELFDYFYKILH+WP+NLNVNQYEQMVLVDLLKKGHLEPEKKIGCGI +FQIRFHP WKSKCFFLIREDESADDFSFRKCVDHILPLPENFK K 
Subjt:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF

Query:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
Subjt:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

A0A5A7UQ03 Protein DCL1.1e-11493.53Show/hide
Query:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK
        MAEETIPQLDPEVTNSGTEDMELETT PK S+DA+EA EAAPVINGDA SKREREESADDGV DGKKQKIEKSVEEER+EKLGGDGKCEEEPVPVSLGPK
Subjt:  MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPK

Query:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF
        SFRSSVELFDYFYKILH+WP+NLNVNQYEQMVLVDLLKKGHLEPEKKIGCGI +FQIRFHP WKSKCFFLIREDESADDFSFRKCVDHILPLPENFK K 
Subjt:  SFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKF

Query:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
Subjt:  DANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

A0A6J1C0K4 protein EMBRYO DEFECTIVE 5141.1e-8575.11Show/hide
Query:  MAEETIPQL---DPEVTNSGTEDMELETT----EPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEP
        MAEET PQL   DPEVTNS TEDMELET+    EPK     +EANEAAP  NGDA SKRER EE+AD+ + + KK K+EKSVEEER+EK+ GDGK +E+ 
Subjt:  MAEETIPQL---DPEVTNSGTEDMELETT----EPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEP

Query:  VPVSLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPL
         PVSLGPKSF SSVE+FDYFYK LH+WP NLN+N+YEQMVL++LLKKGH+EPEKKIGCGIH+FQIR HP +KSKC+FLIREDES DDFSFRKCVDHILPL
Subjt:  VPVSLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPL

Query:  PENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGR
        PEN K K DANRALGG KHRGGGRGGGGGRGRGG  R
Subjt:  PENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGR

A0A6J1F569 protein EMBRYO DEFECTIVE 514-like1.8e-8575Show/hide
Query:  MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVS
        MAEETIPQL    PEVTNS  EDMELE+TEPK S   ++ANEAAPV NGDA SKRER EE ADD   + KK K+EKSVEEERLEK+  DGK EEE  PVS
Subjt:  MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKRER-EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVS

Query:  LGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENF
        LGPKSF SSVELFDYFY  LH+WP NLNVNQYE MVL+DL+KKGH+EP+KKIGCG+ + QIR+HP WKSKCFFLIRED SADDFSFRKCVDHILPLPEN 
Subjt:  LGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENF

Query:  KGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN
        K   DANRALGGGKHRGG        GRGGGGRWRN
Subjt:  KGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic1.1e-0525Show/hide
Query:  KKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEW
        + +++ K   ++ + K  GDG+       V    +    +V L  +   ILH   + +   ++   Q  ++  L   H E +KKIG G+    + +HP++
Subjt:  KKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEW

Query:  K-SKCFFLIREDESADDFSFRKCVDHIL
        + S+C F++R+D    DFS+ KC+  ++
Subjt:  K-SKCFFLIREDESADDFSFRKCVDHIL

Q8L557 Protein EMBRYO DEFECTIVE 5142.1e-4651.09Show/hide
Query:  EETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSF
        +E +  L  EV      DME+ET  PKA T             GD   +RE  E  ++G  + KKQK+ +                EE+  PV LGPK F
Subjt:  EETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSF

Query:  RSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDA
         +SV +FDYF K LH WP +L+VN+YE MVL+DL+KKGH EPEKKIG GI +FQ+R HP WKS+CFFL+RED++ADDFSFRKCVD ILPLPEN K     
Subjt:  RSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDA

Query:  NRALGGGKHRGGGRGGGGGRGRGGGGRWR
            GGG  RGGG G  GGRG G GGR+R
Subjt:  NRALGGGKHRGGGRGGGGGRGRGGGGRWR

Q9C642 Protein DCL homolog, chloroplastic2.1e-0628.05Show/hide
Query:  GDATSKRERE---ESADDGVADGKKQKI-------------EKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQ
        GD+TS R R     +  DG   G  +               E S EEE  E+   +G        V    K    +V L  +   ILH   +     ++ 
Subjt:  GDATSKRERE---ESADDGVADGKKQKI-------------EKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQ

Query:  YEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWK-SKCFFLIREDESADDFSFRKCVDHIL
          +  ++++L   H E EKKIGCGI    +  HP+++ S+C F++R+D    DFS+ KC+  ++
Subjt:  YEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWK-SKCFFLIREDESADDFSFRKCVDHIL

Q9LQ02 DNA-directed RNA polymerase IV subunit 12.6e-0431.45Show/hide
Query:  VPVSLGPKSFR-SSVELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCV----
        +P+SL    F   ++EL     K ILH + +N  +N+ ++  LV ++ + H    +KIG G+   ++       S CF ++R D + +DFS+ KCV    
Subjt:  VPVSLGPKSFR-SSVELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCV----

Query:  DHILPLPENF-KGKFDANRALGGG
          I P   NF K K+  N  L  G
Subjt:  DHILPLPENF-KGKFDANRALGGG

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)1.5e-0728.05Show/hide
Query:  GDATSKRERE---ESADDGVADGKKQKI-------------EKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQ
        GD+TS R R     +  DG   G  +               E S EEE  E+   +G        V    K    +V L  +   ILH   +     ++ 
Subjt:  GDATSKRERE---ESADDGVADGKKQKI-------------EKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQ

Query:  YEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWK-SKCFFLIREDESADDFSFRKCVDHIL
          +  ++++L   H E EKKIGCGI    +  HP+++ S+C F++R+D    DFS+ KC+  ++
Subjt:  YEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWK-SKCFFLIREDESADDFSFRKCVDHIL

AT1G45230.2 Protein of unknown function (DUF3223)2.0e-0728.05Show/hide
Query:  GDATSKRERE---ESADDGVADGKKQKI-------------EKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQ
        GD+TS R R     +  DG   G  +               E S EEE  E+   +G        V    K    +V L  +   ILH   +     ++ 
Subjt:  GDATSKRERE---ESADDGVADGKKQKI-------------EKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKILH--HWPVNLNVNQ

Query:  YEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWK-SKCFFLIREDESADDFSFRKCVDHIL
          +  ++++L   H E EKKIGCGI    +  HP+++ S+C F++R+D    DFS+ KC+  ++
Subjt:  YEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWK-SKCFFLIREDESADDFSFRKCVDHIL

AT1G63020.1 nuclear RNA polymerase D1A1.9e-0531.45Show/hide
Query:  VPVSLGPKSFR-SSVELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCV----
        +P+SL    F   ++EL     K ILH + +N  +N+ ++  LV ++ + H    +KIG G+   ++       S CF ++R D + +DFS+ KCV    
Subjt:  VPVSLGPKSFR-SSVELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCV----

Query:  DHILPLPENF-KGKFDANRALGGG
          I P   NF K K+  N  L  G
Subjt:  DHILPLPENF-KGKFDANRALGGG

AT1G63020.2 nuclear RNA polymerase D1A1.9e-0531.45Show/hide
Query:  VPVSLGPKSFR-SSVELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCV----
        +P+SL    F   ++EL     K ILH + +N  +N+ ++  LV ++ + H    +KIG G+   ++       S CF ++R D + +DFS+ KCV    
Subjt:  VPVSLGPKSFR-SSVELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCV----

Query:  DHILPLPENF-KGKFDANRALGGG
          I P   NF K K+  N  L  G
Subjt:  DHILPLPENF-KGKFDANRALGGG

AT5G62440.1 Protein of unknown function (DUF3223)1.5e-4751.09Show/hide
Query:  EETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSF
        +E +  L  EV      DME+ET  PKA T             GD   +RE  E  ++G  + KKQK+ +                EE+  PV LGPK F
Subjt:  EETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSF

Query:  RSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDA
         +SV +FDYF K LH WP +L+VN+YE MVL+DL+KKGH EPEKKIG GI +FQ+R HP WKS+CFFL+RED++ADDFSFRKCVD ILPLPEN K     
Subjt:  RSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDA

Query:  NRALGGGKHRGGGRGGGGGRGRGGGGRWR
            GGG  RGGG G  GGRG G GGR+R
Subjt:  NRALGGGKHRGGGRGGGGGRGRGGGGRWR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGACAATCCCTCAACTCGATCCGGAGGTAACCAACTCAGGCACTGAAGATATGGAATTGGAAACTACGGAACCGAAAGCTTCAACTGATGCTACTGAAGC
AAATGAGGCCGCTCCAGTAATTAATGGCGATGCTACTTCGAAGCGAGAGAGGGAGGAAAGCGCCGATGATGGCGTCGCCGATGGGAAGAAGCAGAAGATAGAGAAATCTG
TTGAGGAGGAAAGGCTTGAGAAGTTGGGTGGAGACGGTAAGTGTGAGGAGGAACCTGTTCCTGTGAGCTTAGGCCCCAAGAGCTTTCGATCATCGGTGGAATTGTTTGAT
TACTTCTATAAGATCCTTCACCACTGGCCTGTCAACTTGAACGTGAACCAGTACGAGCAAATGGTGCTGGTAGATTTACTTAAGAAGGGACATCTAGAACCAGAGAAAAA
GATTGGCTGTGGTATTCACTCTTTTCAAATTCGTTTCCATCCTGAGTGGAAAAGCAAGTGCTTCTTCCTCATCCGGGAGGATGAGTCTGCTGATGACTTCAGCTTCAGGA
AGTGTGTTGATCATATCCTTCCTCTGCCTGAAAACTTCAAAGGAAAATTTGATGCAAACAGAGCATTAGGCGGTGGTAAGCACCGCGGTGGAGGACGAGGTGGGGGTGGT
GGACGTGGAAGAGGAGGAGGGGGTCGGTGGAGAAACTGA
mRNA sequenceShow/hide mRNA sequence
GTCTTCTATACTGTACTTTGCTAGGGTTTTAGTTTGAAGCTTGATTGTTCCAACTTGAATTCACAAATTACAATGGCGGAAGAGACAATCCCTCAACTCGATCCGGAGGT
AACCAACTCAGGCACTGAAGATATGGAATTGGAAACTACGGAACCGAAAGCTTCAACTGATGCTACTGAAGCAAATGAGGCCGCTCCAGTAATTAATGGCGATGCTACTT
CGAAGCGAGAGAGGGAGGAAAGCGCCGATGATGGCGTCGCCGATGGGAAGAAGCAGAAGATAGAGAAATCTGTTGAGGAGGAAAGGCTTGAGAAGTTGGGTGGAGACGGT
AAGTGTGAGGAGGAACCTGTTCCTGTGAGCTTAGGCCCCAAGAGCTTTCGATCATCGGTGGAATTGTTTGATTACTTCTATAAGATCCTTCACCACTGGCCTGTCAACTT
GAACGTGAACCAGTACGAGCAAATGGTGCTGGTAGATTTACTTAAGAAGGGACATCTAGAACCAGAGAAAAAGATTGGCTGTGGTATTCACTCTTTTCAAATTCGTTTCC
ATCCTGAGTGGAAAAGCAAGTGCTTCTTCCTCATCCGGGAGGATGAGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTTGATCATATCCTTCCTCTGCCTGAAAACTTC
AAAGGAAAATTTGATGCAAACAGAGCATTAGGCGGTGGTAAGCACCGCGGTGGAGGACGAGGTGGGGGTGGTGGACGTGGAAGAGGAGGAGGGGGTCGGTGGAGAAACTG
ATGTTTTTCCCAACACTTTTCAGTCTCACCACTTTGGACTCAATTTTCCTGCGAAGAATTTACCACAAAATCCCCACCAATTCAAGCTTCTTGGCCATGAGTTCAATGAA
AAAAGTAGAGGAATAATTTTTTTATGCCCATAATTTATGCTTTTCTTAGCCTGCTTGATGTATGAACTCAAAATTATGATACAATTTTCTGACGATAATTGTTAAAGGAT
GAGTTTTTATGTTAATTTTAGAGAGAATTAATGTCCGAATATTATCCAAGACTCTTAAATTTTGTTGGTTT
Protein sequenceShow/hide protein sequence
MAEETIPQLDPEVTNSGTEDMELETTEPKASTDATEANEAAPVINGDATSKREREESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFD
YFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDANRALGGGKHRGGGRGGGG
GRGRGGGGRWRN