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CSPI01G03270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G03270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiondof zinc finger protein DOF5.4
Genome locationChr1:2058206..2058571
RNA-Seq ExpressionCSPI01G03270
SyntenyCSPI01G03270
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589588.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]4.3e-4074.02Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDP-----NSRSNNIGFGALDWQSNGDHQVLFD
        M DVT FAMN  H FQNQ ANQW     PSQRMMN NDE+KMQ +T       GGGGGGGYMDQTAQVDP     NSRS+NIGFG LDWQSNGDHQ LFD
Subjt:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDP-----NSRSNNIGFGALDWQSNGDHQVLFD

Query:  LPTAVDQAYWSQNQW-NDQDQPNLYLP
        LP AVDQAYWSQNQW +DQDQPNLYLP
Subjt:  LPTAVDQAYWSQNQW-NDQDQPNLYLP
TYJ98240.1 dof zinc finger protein DOF5.4 [Cucumis melo var. makuwa]3.2e-5994.26Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
        MADVTAFAMNNHHQFQNQTANQW PPPPPPSQRMMNVNDELK+QGMT  S GGGGGGGGGGYMDQT Q+DPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
Subjt:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA

Query:  VDQAYWSQNQWNDQDQPNLYLP
        VDQAYWSQNQWNDQDQPNLYLP
Subjt:  VDQAYWSQNQWNDQDQPNLYLP
XP_008453317.1 PREDICTED: dof zinc finger protein DOF5.4 [Cucumis melo]3.2e-5994.26Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
        MADVTAFAMNNHHQFQNQTANQW PPPPPPSQRMMNVNDELK+QGMT  S GGGGGGGGGGYMDQT Q+DPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
Subjt:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA

Query:  VDQAYWSQNQWNDQDQPNLYLP
        VDQAYWSQNQWNDQDQPNLYLP
Subjt:  VDQAYWSQNQWNDQDQPNLYLP
XP_011648588.1 dof zinc finger protein DOF5.4 [Cucumis sativus]3.7e-6399.17Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAV
        MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSS GGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAV
Subjt:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAV

Query:  DQAYWSQNQWNDQDQPNLYLP
        DQAYWSQNQWNDQDQPNLYLP
Subjt:  DQAYWSQNQWNDQDQPNLYLP
XP_038879969.1 dof zinc finger protein DOF5.4, partial [Benincasa hispida]4.8e-4780Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDP----NSRSNNIGFGALDWQSNGDHQVLFDL
        MADVTAFAMNNH QFQNQ ANQWPPP    QRMMNV+DELKMQ +TD        GGGGGY+DQTAQVDP    NSRSNNIGFG LDWQSNGDHQVLFDL
Subjt:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDP----NSRSNNIGFGALDWQSNGDHQVLFDL

Query:  PTAVDQAYWSQNQWNDQDQPNLYLP
        P AVDQAYWSQNQWNDQDQ NLYLP
Subjt:  PTAVDQAYWSQNQWNDQDQPNLYLP
TrEMBL top hitse value%identityAlignment
A0A0A0LSJ3 Dof-type domain-containing protein1.8e-6399.17Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAV
        MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSS GGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAV
Subjt:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAV

Query:  DQAYWSQNQWNDQDQPNLYLP
        DQAYWSQNQWNDQDQPNLYLP
Subjt:  DQAYWSQNQWNDQDQPNLYLP
A0A1S3BVD8 dof zinc finger protein DOF5.41.5e-5994.26Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
        MADVTAFAMNNHHQFQNQTANQW PPPPPPSQRMMNVNDELK+QGMT  S GGGGGGGGGGYMDQT Q+DPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
Subjt:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA

Query:  VDQAYWSQNQWNDQDQPNLYLP
        VDQAYWSQNQWNDQDQPNLYLP
Subjt:  VDQAYWSQNQWNDQDQPNLYLP
A0A5A7UTG5 Dof zinc finger protein DOF5.41.5e-5994.26Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
        MADVTAFAMNNHHQFQNQTANQW PPPPPPSQRMMNVNDELK+QGMT  S GGGGGGGGGGYMDQT Q+DPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
Subjt:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA

Query:  VDQAYWSQNQWNDQDQPNLYLP
        VDQAYWSQNQWNDQDQPNLYLP
Subjt:  VDQAYWSQNQWNDQDQPNLYLP
A0A5D3BEK2 Dof zinc finger protein DOF5.41.5e-5994.26Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
        MADVTAFAMNNHHQFQNQTANQW PPPPPPSQRMMNVNDELK+QGMT  S GGGGGGGGGGYMDQT Q+DPNSRSNNIGFGALDWQSNGDHQVLFDLPTA
Subjt:  MADVTAFAMNNHHQFQNQTANQW-PPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTA

Query:  VDQAYWSQNQWNDQDQPNLYLP
        VDQAYWSQNQWNDQDQPNLYLP
Subjt:  VDQAYWSQNQWNDQDQPNLYLP
A0A6J1E400 dof zinc finger protein DOF5.4-like2.1e-4074.02Show/hide
Query:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDP-----NSRSNNIGFGALDWQSNGDHQVLFD
        M DVT FAMN  H FQNQ ANQW     PSQRMMN NDE+KMQ +T       GGGGGGGYMDQTAQVDP     NSRS+NIGFG LDWQSNGDHQ LFD
Subjt:  MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDP-----NSRSNNIGFGALDWQSNGDHQVLFD

Query:  LPTAVDQAYWSQNQW-NDQDQPNLYLP
        LP AVDQAYWSQNQW +DQDQPNLYLP
Subjt:  LPTAVDQAYWSQNQW-NDQDQPNLYLP
SwissProt top hitse value%identityAlignment
Q8LDR0 Dof zinc finger protein DOF5.43.6e-1346.81Show/hide
Query:  RMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSN--NIGFGALDWQSNGDHQVLFDLPTAVDQAYWSQNQW--NDQDQPNLYLP
        + +N +D LK++G T      G         D+TAQV+   RS+  N+GF  LDW S G  Q LFDL + VD AYWSQ+QW  +DQDQ  LYLP
Subjt:  RMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSN--NIGFGALDWQSNGDHQVLFDLPTAVDQAYWSQNQW--NDQDQPNLYLP
Arabidopsis top hitse value%identityAlignment
AT5G60850.1 OBF binding protein 42.6e-1446.81Show/hide
Query:  RMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSN--NIGFGALDWQSNGDHQVLFDLPTAVDQAYWSQNQW--NDQDQPNLYLP
        + +N +D LK++G T      G         D+TAQV+   RS+  N+GF  LDW S G  Q LFDL + VD AYWSQ+QW  +DQDQ  LYLP
Subjt:  RMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSN--NIGFGALDWQSNGDHQVLFDLPTAVDQAYWSQNQW--NDQDQPNLYLP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGTGACGGCGTTTGCGATGAATAATCACCATCAGTTTCAAAATCAGACGGCGAACCAATGGCCCCCGCCGCCACCGCCGTCGCAGAGAATGATGAACGTTAA
CGATGAACTGAAGATGCAGGGTATGACGGACAGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGGTATATGGATCAAACGGCTCAAGTGGATCCGAATAGCAGAT
CAAACAACATTGGATTTGGAGCGTTAGATTGGCAATCTAACGGTGATCATCAAGTCTTGTTTGATTTACCTACAGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGG
AATGATCAAGACCAGCCGAATCTGTACCTTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACGTGACGGCGTTTGCGATGAATAATCACCATCAGTTTCAAAATCAGACGGCGAACCAATGGCCCCCGCCGCCACCGCCGTCGCAGAGAATGATGAACGTTAA
CGATGAACTGAAGATGCAGGGTATGACGGACAGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGGTATATGGATCAAACGGCTCAAGTGGATCCGAATAGCAGAT
CAAACAACATTGGATTTGGAGCGTTAGATTGGCAATCTAACGGTGATCATCAAGTCTTGTTTGATTTACCTACAGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGG
AATGATCAAGACCAGCCGAATCTGTACCTTCCGTAA
Protein sequenceShow/hide protein sequence
MADVTAFAMNNHHQFQNQTANQWPPPPPPSQRMMNVNDELKMQGMTDSSGGGGGGGGGGGYMDQTAQVDPNSRSNNIGFGALDWQSNGDHQVLFDLPTAVDQAYWSQNQW
NDQDQPNLYLP