; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G03730 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G03730
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAT-rich interactive domain protein
Genome locationChr1:2328609..2330073
RNA-Seq ExpressionCSPI01G03730
SyntenyCSPI01G03730
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138240.1 uncharacterized protein LOC101218989 [Cucumis sativus]1.1e-10499.5Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA
        MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQ EEEEERNRTAGVEMGSPVVENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA

Query:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
        GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
Subjt:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE

XP_008453388.1 PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo]2.1e-10094.06Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAGVEMGSPVVE
        MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFRTGRFDSKNR+SSTTIKEQ+ EEEEERNRTAG+EMGSP+VE
Subjt:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAGVEMGSPVVE

Query:  NAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
        NAGVVFDVDENLP+LPGLQPDFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
Subjt:  NAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_022134616.1 uncharacterized protein LOC111006843 [Momordica charantia]1.7e-8683.58Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA
        M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRTGRFDSKNR+SSTT KEQEEEEEERNR A +E   P VENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA

Query:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL
        GV FDVDENLP+LPGLQPDFWEGP+WD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+L EPEASNPDVFESNPTEVAPSL
Subjt:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

XP_022987248.1 uncharacterized protein LOC111484859 [Cucurbita maxima]8.9e-8382.67Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAGVEMGSPVVEN
        M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR GR DSKNR+SST+ KEQEE EEEERNR A       + EN
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAGVEMGSPVVEN

Query:  AGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPS
        AGV FDVDENLP+LPGLQPDFWEG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPEASNPDVFESNPTEVAPS
Subjt:  AGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_038876354.1 uncharacterized protein LOC120068690 [Benincasa hispida]6.0e-8786.07Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA
        M LTITNGGAT GT GGILYR+ TRTPSN FL RRNALF PSKEARTL++VQAKKSSFRTGRFD KNR+SSTT   QE+EEEERNRTA +   SP VENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA

Query:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL
        GV FDVDENLP+LPGLQPDFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFK+TPAYKESVQTREIL EPEASNPDVFESNPTEVAPSL
Subjt:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A0A0LPS1 Uncharacterized protein5.2e-10599.5Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA
        MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQ EEEEERNRTAGVEMGSPVVENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA

Query:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
        GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE
Subjt:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE

A0A1S3BW57 uncharacterized protein LOC1034941201.0e-10094.06Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAGVEMGSPVVE
        MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFRTGRFDSKNR+SSTTIKEQ+ EEEEERNRTAG+EMGSP+VE
Subjt:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAGVEMGSPVVE

Query:  NAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
        NAGVVFDVDENLP+LPGLQPDFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
Subjt:  NAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

A0A5A7UV79 Putative AT-rich interactive domain-containing protein 5A1.0e-10094.06Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAGVEMGSPVVE
        MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFRTGRFDSKNR+SSTTIKEQ+ EEEEERNRTAG+EMGSP+VE
Subjt:  MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQE-EEEEERNRTAGVEMGSPVVE

Query:  NAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
        NAGVVFDVDENLP+LPGLQPDFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS
Subjt:  NAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

A0A6J1BYA9 uncharacterized protein LOC1110068438.4e-8783.58Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA
        M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRTGRFDSKNR+SSTT KEQEEEEEERNR A +E   P VENA
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENA

Query:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL
        GV FDVDENLP+LPGLQPDFWEGP+WD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+L EPEASNPDVFESNPTEVAPSL
Subjt:  GVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPSL

Query:  E
        E
Subjt:  E

A0A6J1JIX0 uncharacterized protein LOC1114848594.3e-8382.67Show/hide
Query:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAGVEMGSPVVEN
        M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR GR DSKNR+SST+ KEQEE EEEERNR A       + EN
Subjt:  MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEE-EEEERNRTAGVEMGSPVVEN

Query:  AGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPS
        AGV FDVDENLP+LPGLQPDFWEG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPEASNPDVFESNPTEVAPS
Subjt:  AGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73885.1 unknown protein1.9e-2749.29Show/hide
Query:  FDSKNRKSSTTIKEQEEEEEERN-RTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATD
        FD +N  S   I +++ +    N R  G    +P              +  LPGL+PD +EG +WD  GFF++YLWAFGI+FA+I+ G+A  TYNEGATD
Subjt:  FDSKNRKSSTTIKEQEEEEEERN-RTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATD

Query:  FKETPAYKESVQTREIL-EPEASN-PDVFESNPTEVAPSL
        FKETP YKE++Q+R++L E E+SN  DVFESNPTEVAP++
Subjt:  FKETPAYKESVQTREIL-EPEASN-PDVFESNPTEVAPSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGC
GCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAA
TCAAGGAACAGGAAGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGACGAGAATTTG
CCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGC
ATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAA
ACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATTATTTAGTGAATCGCATATCTTCTTCCTTATCCGAAGCAAAGAAGAAAAAAAAATCCTCTTTTCATTTTTCGGAGTGCTCAGAGCTCACTCTCCACCACTCAAATGCC
TCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTT
TTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAG
GAACAGGAAGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGACGAGAATTTGCCGCA
ATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTG
GAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCA
GATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGATGTTGATGCTTAGATATCAAAAACAGATTACACATCTTGGATACATTATCATCCTCCCAAGC
AGTTAAAGAAGTGAAAAAGAAAACAAAGGGTACTATGTGAATTTGTAATGGCATATTTTTCTAGGTATGTTATGACAACTTTATTCTATTGTATCTAGTTAAGATTTTGA
TCTTATGTCTTAGTTTTCTTGTCAACATGTTGTTTTTTTCTTTTAGGTCTTTCTTCTGTAGACATAGATTGCTGTCCTTAGACTAACTGTTTTAGTGAGATTAGGGAATA
AGGCATATCTAGCTGCTAAGTGGATCAAATTGGTCGGGTTCAAACGTTAAAATGCTAAAGAAACAACTATATTTTGTTAAGAGCGTATTTAACTAAAACAATCTAGTAGA
AGTCTAATAAAGAAGAACATCACTGCTAGCTGCTGAAGCAACCCCATACATCATATGATAA
Protein sequenceShow/hide protein sequence
MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEEERNRTAGVEMGSPVVENAGVVFDVDENL
PQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE