; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G04060 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G04060
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionStress up-regulated Nod 19
Genome locationChr1:2520720..2521281
RNA-Seq ExpressionCSPI01G04060
SyntenyCSPI01G04060
Gene Ontology termsNA
InterPro domainsIPR011692 - Stress up-regulated Nod 19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058100.1 stress up-regulated Nod 19 protein [Cucumis melo var. makuwa]2.1e-4566.44Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEMRSS
        IEYDV+AE CS T K+DDDKCNAVKKSKVMFPSSGYLIYGVA QHIGATGA FYG+DGRVLCSSSPI+G+GNEEGYV+GMTTCYP+PGS+ INKGEM + 
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEMRSS

Query:  GYLSHYCCCK-----------------IKSSSTLPEKAGNDSTIVM
         ++S+Y                      KSSS L E+ GN++TIVM
Subjt:  GYLSHYCCCK-----------------IKSSSTLPEKAGNDSTIVM

TYK28454.1 Stress up-regulated Nod 19 [Cucumis melo var. makuwa]6.7e-4769.66Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        +EYDV+AE CSLTK+LDD KCNAVKKSKVMFP+SGYLIYGVASQHIGATGAAFYG+DGRVLCSSSPIYGEGNEEGY+IGMT CYPKPGSI INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSHYCCCKI-----------KSSSTLPEKAGNDSTIVM
            S  L+H     +            SSSTL E+  ND+ IVM
Subjt:  --RSSGYLSHYCCCKI-----------KSSSTLPEKAGNDSTIVM

XP_008453443.1 PREDICTED: uncharacterized protein LOC103494148 [Cucumis melo]1.9e-4669.66Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        +EYDV+AE CSLTK+LDD KCNAVKKSKVMFP+SGYLIYGVASQHIGATGAAFYG+DGRVLCSSSPIYGEGNEEGY+IGMT CYPKPGS+ INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSH---------YCCCKI--KSSSTLPEKAGNDSTIVM
            S  L+H         +   +I   SSSTL E+  ND+ IVM
Subjt:  --RSSGYLSH---------YCCCKI--KSSSTLPEKAGNDSTIVM

XP_011648993.2 uncharacterized protein LOC101210584 [Cucumis sativus]2.3e-4772.22Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        IEYDV+AEFCSL  KLDDDKCNAVKKSKVMFPSSGYLIYGVA QHIGATGA FYGQDGRVLCSSSPI+G+ NEEGYVIGMTTCYPKPGSI INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSHYCCCKI----------KSSSTLPEKAGNDSTIVM
            S  L+H     I          K SSTL E+ GN++TIVM
Subjt:  --RSSGYLSHYCCCKI----------KSSSTLPEKAGNDSTIVM

XP_011660342.2 uncharacterized protein LOC105436375 [Cucumis sativus]2.4e-5783.92Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSH---------YCCCKIKSSSTLPEKAGNDSTIVM
            S  L+H             KIKSSSTLPEKAGNDSTIVM
Subjt:  --RSSGYLSH---------YCCCKIKSSSTLPEKAGNDSTIVM

TrEMBL top hitse value%identityAlignment
A0A0A0LS56 Uncharacterized protein1.1e-4772.22Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        IEYDV+AEFCSL  KLDDDKCNAVKKSKVMFPSSGYLIYGVA QHIGATGA FYGQDGRVLCSSSPI+G+ NEEGYVIGMTTCYPKPGSI INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSHYCCCKI----------KSSSTLPEKAGNDSTIVM
            S  L+H     I          K SSTL E+ GN++TIVM
Subjt:  --RSSGYLSHYCCCKI----------KSSSTLPEKAGNDSTIVM

A0A1S3BX23 uncharacterized protein LOC1034941461.0e-4566.44Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEMRSS
        IEYDV+AE CS T K+DDDKCNAVKKSKVMFPSSGYLIYGVA QHIGATGA FYG+DGRVLCSSSPI+G+GNEEGYV+GMTTCYP+PGS+ INKGEM + 
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEMRSS

Query:  GYLSHYCCCK-----------------IKSSSTLPEKAGNDSTIVM
         ++S+Y                      KSSS L E+ GN++TIVM
Subjt:  GYLSHYCCCK-----------------IKSSSTLPEKAGNDSTIVM

A0A1S3BXF3 uncharacterized protein LOC1034941489.4e-4769.66Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        +EYDV+AE CSLTK+LDD KCNAVKKSKVMFP+SGYLIYGVASQHIGATGAAFYG+DGRVLCSSSPIYGEGNEEGY+IGMT CYPKPGS+ INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSH---------YCCCKI--KSSSTLPEKAGNDSTIVM
            S  L+H         +   +I   SSSTL E+  ND+ IVM
Subjt:  --RSSGYLSH---------YCCCKI--KSSSTLPEKAGNDSTIVM

A0A5A7UX80 Stress up-regulated Nod 199.4e-4769.66Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        +EYDV+AE CSLTK+LDD KCNAVKKSKVMFP+SGYLIYGVASQHIGATGAAFYG+DGRVLCSSSPIYGEGNEEGY+IGMT CYPKPGS+ INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSH---------YCCCKI--KSSSTLPEKAGNDSTIVM
            S  L+H         +   +I   SSSTL E+  ND+ IVM
Subjt:  --RSSGYLSH---------YCCCKI--KSSSTLPEKAGNDSTIVM

A0A5D3DY24 Stress up-regulated Nod 193.2e-4769.66Show/hide
Query:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---
        +EYDV+AE CSLTK+LDD KCNAVKKSKVMFP+SGYLIYGVASQHIGATGAAFYG+DGRVLCSSSPIYGEGNEEGY+IGMT CYPKPGSI INKGEM   
Subjt:  IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEM---

Query:  --RSSGYLSHYCCCKI-----------KSSSTLPEKAGNDSTIVM
            S  L+H     +            SSSTL E+  ND+ IVM
Subjt:  --RSSGYLSHYCCCKI-----------KSSSTLPEKAGNDSTIVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G61820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.1e-1546.67Show/hide
Query:  KLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGE----GNEEGYVIGMTTCYP
        K + D C  VKK  ++ P  GY++YGVA QH G  G A Y ++G  +C+S P YG     GNE GY++GM++CYP
Subjt:  KLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGE----GNEEGYVIGMTTCYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGTATGATGTAGATGCAGAGTTCTGCTCCCTCACAAAGAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCAAAGGTAATGTTTCCATCAAGTGGGTATCT
CATCTATGGAGTGGCTAGCCAACATATTGGTGCAACTGGTGCAGCATTTTATGGACAGGATGGAAGAGTTCTGTGCTCTTCATCTCCAATTTATGGCGAAGGAAATGAAG
AAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCACGATCAACAAAGGAGAAATGAGGAGTTCGGGGTATCTTTCACATTATTGTTGCTGTAAA
ATAAAATCATCATCAACACTTCCGGAAAAAGCTGGCAATGACAGCACCATCGTCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATTGAGTATGATGTAGATGCAGAGTTCTGCTCCCTCACAAAGAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCAAAGGTAATGTTTCCATCAAGTGGGTATCT
CATCTATGGAGTGGCTAGCCAACATATTGGTGCAACTGGTGCAGCATTTTATGGACAGGATGGAAGAGTTCTGTGCTCTTCATCTCCAATTTATGGCGAAGGAAATGAAG
AAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCACGATCAACAAAGGAGAAATGAGGAGTTCGGGGTATCTTTCACATTATTGTTGCTGTAAA
ATAAAATCATCATCAACACTTCCGGAAAAAGCTGGCAATGACAGCACCATCGTCATGTAA
Protein sequenceShow/hide protein sequence
IEYDVDAEFCSLTKKLDDDKCNAVKKSKVMFPSSGYLIYGVASQHIGATGAAFYGQDGRVLCSSSPIYGEGNEEGYVIGMTTCYPKPGSITINKGEMRSSGYLSHYCCCK
IKSSSTLPEKAGNDSTIVM