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CSPI01G04970 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G04970
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:3217698..3218087
RNA-Seq ExpressionCSPI01G04970
SyntenyCSPI01G04970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0LSH3 Uncharacterized protein3.5e-4176.74Show/hide
Query:  MALSTSALNQPLFLSVLPKALENTLLRKGLIYSNIFNVVDDGKSTSFLSNLWIGSSPSREPLLGFSSYFSGKKALFLTMGTVVMPVGSCVLRRNLKEEQF
        MALSTSALNQPLFLSVLPKALENTLLRKGLIYSNIFNVVDD                             GKKALFLTMGTVVMPVGSCVLRRNLKEEQF
Subjt:  MALSTSALNQPLFLSVLPKALENTLLRKGLIYSNIFNVVDDGKSTSFLSNLWIGSSPSREPLLGFSSYFSGKKALFLTMGTVVMPVGSCVLRRNLKEEQF

Query:  VDLPSISFPSGSLRRLLEVEERDRRHLLI
        VDLPSI FPSGSLRRLLEVEERDRRHLLI
Subjt:  VDLPSISFPSGSLRRLLEVEERDRRHLLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTTCCACCTCAGCCTTAAACCAGCCACTATTTCTCTCAGTTTTGCCAAAGGCCCTTGAAAATACATTGTTACGAAAAGGGCTGATTTATAGCAATATTTTCAA
CGTGGTAGACGATGGTAAATCCACTAGCTTTTTGTCCAATTTATGGATTGGATCTTCCCCTTCAAGGGAACCTCTCCTAGGCTTTTCTTCTTATTTTTCAGGAAAGAAGG
CACTATTTCTAACCATGGGAACCGTAGTGATGCCTGTTGGATCTTGTGTTCTGAGGAGAAACTTAAAAGAAGAGCAGTTTGTTGACTTGCCAAGCATATCCTTTCCTAGT
GGCAGTTTAAGAAGACTATTGGAAGTGGAAGAAAGAGACAGAAGGCACCTTCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTTCCACCTCAGCCTTAAACCAGCCACTATTTCTCTCAGTTTTGCCAAAGGCCCTTGAAAATACATTGTTACGAAAAGGGCTGATTTATAGCAATATTTTCAA
CGTGGTAGACGATGGTAAATCCACTAGCTTTTTGTCCAATTTATGGATTGGATCTTCCCCTTCAAGGGAACCTCTCCTAGGCTTTTCTTCTTATTTTTCAGGAAAGAAGG
CACTATTTCTAACCATGGGAACCGTAGTGATGCCTGTTGGATCTTGTGTTCTGAGGAGAAACTTAAAAGAAGAGCAGTTTGTTGACTTGCCAAGCATATCCTTTCCTAGT
GGCAGTTTAAGAAGACTATTGGAAGTGGAAGAAAGAGACAGAAGGCACCTTCTCATCTGA
Protein sequenceShow/hide protein sequence
MALSTSALNQPLFLSVLPKALENTLLRKGLIYSNIFNVVDDGKSTSFLSNLWIGSSPSREPLLGFSSYFSGKKALFLTMGTVVMPVGSCVLRRNLKEEQFVDLPSISFPS
GSLRRLLEVEERDRRHLLI