CuGenDBv2

Gene ID	CSPI01G05000
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	rho GDP-dissociation inhibitor 1-like
Genome location	Chr1:3233452..3233820
RNA-Seq Expression	CSPI01G05000
Synteny	CSPI01G05000
Gene Ontology terms	GO:0007266 - Rho protein signal transduction (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0005829 - cytosol (cellular component) GO:0016020 - membrane (cellular component) GO:0005094 - Rho GDP-dissociation inhibitor activity (molecular function)
InterPro domains	IPR000406 - Rho protein GDP-dissociation inhibitor IPR014756 - Immunoglobulin E-set IPR024792 - Rho GDP-dissociation inhibitor domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038008.1 rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo var. makuwa]

1.4e-17

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK L  +    SA KVDEF +EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

KAE8652489.1 hypothetical protein Csa_013953 [Cucumis sativus]

4.2e-59

97.54

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Query:  MEVGKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCL
        MEVGK+LRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGP+LSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCL
Subjt:  MEVGKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCL

Query:  YRKIKVVMFCLLVKRDLDINFG
        YRKIKVVMF LLVKRDLDINFG
Subjt:  YRKIKVVMFCLLVKRDLDINFG

XP_008447394.1 PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo]

1.4e-17

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK L  +    SA KVDEF +EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

XP_008447395.1 PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis melo]

1.4e-17

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK L  +    SA KVDEF +EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

XP_011651610.1 rho GDP-dissociation inhibitor 1 [Cucumis sativus]

8.0e-18

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK+L  +    SA KVDEF  EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LC51 Uncharacterized protein

3.9e-18

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK+L  +    SA KVDEF  EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

A0A0A0LT43 PH domain-containing protein

2.3e-58

97.5

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Query:  VGKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCLYR
        VGK+LRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGP+LSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCLYR
Subjt:  VGKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCLYR

Query:  KIKVVMFCLLVKRDLDINFG
        KIKVVMF LLVKRDLDINFG
Subjt:  KIKVVMFCLLVKRDLDINFG

A0A1S3BGS7 rho GDP-dissociation inhibitor 1-like isoform X2

6.6e-18

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK L  +    SA KVDEF +EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

A0A1S3BI82 rho GDP-dissociation inhibitor 1-like isoform X1

6.6e-18

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK L  +    SA KVDEF +EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

A0A5A7T594 Rho GDP-dissociation inhibitor 1-like isoform X1

6.6e-18

76.39

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Query:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE
        MEVGK L  +    SA KVDEF +EK+SEE EVDDKDGFT GP+LSLKEQL+KDKD ESLRRWKEKLLGCLE
Subjt:  MEVGKKLRRKQ-CLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLE

SwissProt top hits

e value

%identity

Alignment

Q9SFC6 Rho GDP-dissociation inhibitor 1

1.5e-06

54.17

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Query:  ELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKG
        E E DD     LGP  ++KE L+KDKD ESLR+WKE+LLG ++  N G
Subjt:  ELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKG

Arabidopsis top hits

e value

%identity

Alignment

AT1G12070.1 Immunoglobulin E-set superfamily protein

1.0e-07

39.02

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Query:  GKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPL
        G+ L RK   S+    +  +E++ ++LE        LGP+++LKEQL+KDKD ESLRRWKE+LLG ++    G      + +
Subjt:  GKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPL

AT1G62450.1 Immunoglobulin E-set superfamily protein

3.6e-08

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Query:  SEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKG
        +E+ E D+     LGP+++LKEQL++DKD ESLRRWKE+LLG ++  + G
Subjt:  SEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKG

AT3G07880.1 Immunoglobulin E-set superfamily protein

1.0e-07

54.17

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Query:  ELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKG
        E E DD     LGP  ++KE L+KDKD ESLR+WKE+LLG ++  N G
Subjt:  ELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKG

Sequences

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CDS sequence

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ATGGAGGTTGGGAAGAAGTTGAGGAGGAAGCAGTGTCTGTCTGCCAGAAAAGTCGATGAGTTCTGGCAGGAAAAGAAGAGTGAGGAATTAGAGGTTGATGATAAAGATGG
GTTCACTCTAGGGCCTGTCCTTTCACTCAAGGAACAACTTGATAAGGACAAGGATGGTGAAAGCCTGAGAAGGTGGAAAGAAAAGTTGCTTGGTTGCTTAGAAAGAGTGA
ACAAAGGGAACCTGAAGTCAAGTTTCATTCCATTGGAATTATTTCTGATGAATTTGTGGAAGTCAATACTCCATTGCCTGTACAGGAAAATCAAAGTGGTCATGTTCTGT
TTACTCGTCAAGAGGGATCTTGATATCAACTTTGGTTGA

mRNA sequence

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Protein sequence

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MEVGKKLRRKQCLSARKVDEFWQEKKSEELEVDDKDGFTLGPVLSLKEQLDKDKDGESLRRWKEKLLGCLERVNKGNLKSSFIPLELFLMNLWKSILHCLYRKIKVVMFC
LLVKRDLDINFG

CSPI01G05000 (gene) of Cucumber (PI 183967) v1 genome