CuGenDBv2

Gene ID	CSPI01G05390
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Genome location	Chr1:3481620..3484289
RNA-Seq Expression	CSPI01G05390
Synteny	CSPI01G05390
Gene Ontology terms	GO:0043086 - negative regulation of catalytic activity (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030599 - pectinesterase activity (molecular function) GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domains	IPR040278 - UPF0426 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KGN63981.2 hypothetical protein Csa_013804 [Cucumis sativus]

2.7e-56

100

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSV
        TVESAGLREEVDTQGSV
Subjt:  TVESAGLREEVDTQGSV

XP_004137400.1 UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]

1.5e-62

100

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAGLREEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

XP_008439829.1 PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]

4.9e-58

94.53

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAGL EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]

1.0e-47

80.47

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  N +SI S KKP+R++  RLG +NSTNGI AF FNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

XP_038893812.1 UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]

6.6e-55

89.84

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSS  SVLFGEMGKLKGRNH+SILSS KPVR +F RL  NN TNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAGL EE+DTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT92 Uncharacterized protein

7.1e-63

100

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAGLREEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic

2.4e-58

94.53

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAGL EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein

2.4e-58

94.53

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAGL EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic

4.9e-48

80.47

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  N +SI S KKP+R++  RLG +NSTNGI AF FNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic

9.3e-47

78.91

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTA VL G MGK +  N +SI S KKP+R++  RLG NNSTN I AF F P+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLREEVDTQGSVQEDGPTEIEIE
        TVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLREEVDTQGSVQEDGPTEIEIE

SwissProt top hits

e value

%identity

Alignment

P74786 UPF0426 protein ssl0294

1.5e-06

38.81

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Query:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK--TVESAGLREEVDTQGSVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K    + +G     D   + Q++ P  I+I+
Subjt:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK--TVESAGLREEVDTQGSVQEDGPTEIEIE

Q8YQ06 UPF0426 protein asl4034

7.2e-04

32.31

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Query:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE
        P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K          V    + +  GP  I I+
Subjt:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE

Q9FZ89 UPF0426 protein At1g28150, chloroplastic

1.8e-18

63.51

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Query:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE
        FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G V   ED P +IEIE
Subjt:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G28150.1 unknown protein

1.3e-19

63.51

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Query:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE
        FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G V   ED P +IEIE
Subjt:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE

Sequences

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CDS sequence

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ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGT
GCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCATTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAG
TGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAA
GTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA

mRNA sequence

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AATATTTGGGTATTTGTTTGGAAATTATTTCCGACAAAAGGGTGGCTGGGAAAATTGAGGCTTTTTTTTCTTTCTTTTTTTTATCGTATATATTTTCATCGGTGGATGTG
TGGAATTAAATCTAATGTAGAAAGAACACTACGGGCATGTGGTTGTTTCTCGAAATGTTTGGTCAATTGTAAGAAGAAATGATGACGAATTGAAGCCATTACCTTAATTC
CAACGCAAATATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATCCTTCAATCAATCACAAGCAGCTCTGTTCCATTTGCATCATCAGAGATTAACCCA
TGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTG
CGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCATTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGT
GGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAG
TTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCATCAATGGATCTAACCTGCTATAGACAATCTTATTTGTTCCAATAAT
ATAAACTGGAAAAGTGGGAATGAAATGATATTTGATTACTATTACCACACCTCCCTTGATTTCCCTTCGACCTCTTTTTTTCTAGTTTGTATTTAGTTTTTAGTACTTTT
TCAACTTCTAAATTTGTGGATTCCGATTAAATTATTTACAAAATAGTGTATTGCTAGAAATTGTGGTTAATTATATAAATTGAAGTTCCTAGTTGGTAGATCGTAACTTT
ATAGTATAATAATG

Protein sequence

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MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREE
VDTQGSVQEDGPTEIEIE

CSPI01G05390 (gene) of Cucumber (PI 183967) v1 genome