; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G05710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G05710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr1:3625910..3627399
RNA-Seq ExpressionCSPI01G05710
SyntenyCSPI01G05710
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137413.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]1.3e-14499.6Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        REKEIANGRLAMLAFLGFIVQHN TGKGPFDNFMQHISDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

XP_022137160.1 chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia]9.6e-13592.4Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MAT +TQASA VFRPCASRSRFLSGSSGKFNRALSVKPT SS+P  FKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+ GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFIVQHN TGKGPFDNF+QHISDPWHNTI+QTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

XP_022949090.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]5.6e-13592Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        M+ V+ QASA VFRP ASRSRFL GSSGKFNRALSVKPTTS +P++FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+YGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFI+QHN TGKGPFDNF+QHISDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

XP_023524863.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo]2.3e-13692.8Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        M+ V+ QASA VFRP ASRSRFLSGSSGKFNRALSVKPTTSS+P++FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+YGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFI+QHN TGKGPFDNF+QHISDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

XP_038894825.1 chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]1.0e-13692.8Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MATV+TQASA+VFRPC  RSRFLS +SGKFNR LSVKPTTSS+PN+FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T++GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFIVQHN TGKGPFDNF+QHISDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

TrEMBL top hitse value%identityAlignment
A0A0A0LTE5 Chlorophyll a-b binding protein, chloroplastic6.5e-14599.6Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        REKEIANGRLAMLAFLGFIVQHN TGKGPFDNFMQHISDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

A0A2C9VP65 Chlorophyll a-b binding protein, chloroplastic5.5e-12886.8Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MATVITQASA VFRPCASRSRFL+GSS K NR +S+KP  SS   +FKVEAKKGEWLPGLPSP YL+GSLPGDNGFDPLGLAEDPENL+WY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T  G+INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKE+ANGRLAMLAFLGF+VQHN TGKGPFDN +QH+SDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

A0A6J1C5V9 Chlorophyll a-b binding protein, chloroplastic4.7e-13592.4Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MAT +TQASA VFRPCASRSRFLSGSSGKFNRALSVKPT SS+P  FKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+ GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFIVQHN TGKGPFDNF+QHISDPWHNTI+QTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

A0A6J1GBT1 Chlorophyll a-b binding protein, chloroplastic2.7e-13592Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        M+ V+ QASA VFRP ASRSRFL GSSGKFNRALSVKPTTS +P++FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+YGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFI+QHN TGKGPFDNF+QHISDPWHNTIVQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

A0A6J1KDI3 Chlorophyll a-b binding protein, chloroplastic7.9e-13591.6Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        M+ V+ QASA VFRP ASRSRFLSGSSGKFNRALSVKPTTS +P++FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+ GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR
        +EKEIANGRLAMLAFLGFI+QHN TGKGPFDNF+QHISDPWHNT+VQTLR
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTLR

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic2.5e-6149.57Show/hide
Query:  SRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTN
        +++ FL G   + ++  +     S+       +  +  W PG   P +LDGSLPGD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+LT 
Subjt:  SRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTN

Query:  YGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAREKEIANGRLA
         GI+N P WY AG+ EYF  ++TLF++E +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E R KEI NGRLA
Subjt:  YGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAREKEIANGRLA

Query:  MLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTI
        MLA +G   QH  TG GP DN   H++DP H TI
Subjt:  MLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTI

P13869 Chlorophyll a-b binding protein, chloroplastic6.6e-6249.79Show/hide
Query:  ASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLT
        A+++ FL G   + ++ ++   + S   +A   +  +  W PG   P +LDGSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE LT
Subjt:  ASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLT

Query:  NYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAREKEIANGRL
          G++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E R KEI NGRL
Subjt:  NYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAREKEIANGRL

Query:  AMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTI
        AMLA +G   QH  TG GP DN   H++DP H TI
Subjt:  AMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTI

P27521 Chlorophyll a-b binding protein 4, chloroplastic4.5e-11980.72Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSI-PNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNG
        MATV T ASA++FRPC S+ RFL+GSSG+ NR LS     SS   ++FKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+ QAELVNG
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSI-PNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNG

Query:  RWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGM+LPEV T  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQT
        A+EKE+ANGRLAMLAFLGF+VQHN TGKGPF+N +QH+SDPWHNTIVQT
Subjt:  AREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQT

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)5.6e-8565.33Show/hide
Query:  KFNRALSVKPTTSSIPNAFKVEA---KKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPK
        +F   +   P  S  P + + +     KG WLPGL SP YLDGSL GDNGFDPL LAEDPE+LRW+ QA++VNGRWAMLGVAGM++PEVLT  G++N P+
Subjt:  KFNRALSVKPTTSSIPNAFKVEA---KKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPK

Query:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIVQHNA
        W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE +EKE+ANGRLAMLAFLGF+VQHN 
Subjt:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIVQHNA

Query:  TGKGPFDNFMQHISDPWHNTIVQTL
         GKGPF+N  QH++DPWHNTI+QT+
Subjt:  TGKGPFDNFMQHISDPWHNTIVQTL

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic2.0e-12283.13Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR
        MATV TQASA +F PC  +SRFL GSSGK NR ++ +P   S   +FKVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRW+ QAELVNGR
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGR

Query:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+ GIINVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTL
        +EKEIANGRLAMLAFLGFI+QHN TGKGPFDN +QHISDPWHNTIVQTL
Subjt:  REKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQTL

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 69.5e-5651.3Show/hide
Query:  WLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR
        W PG   P +LDGSLPGD GFDPLGL  DP+ L+W+ QAEL++ RWAML V G+++PE L   G I    WYDAG  EYFA S+TLFV + +L  + E R
Subjt:  WLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR

Query:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWH
        RW D+  PGSV+ +P +     P  DVGYPGG++           EP +  R KEI NGRLAMLAFLGF  Q   T + P +N M H++DP H
Subjt:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWH

AT1G45474.1 photosystem I light harvesting complex gene 51.5e-5648.46Show/hide
Query:  RALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGK
        R  SVK     I     VE  +  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WY QAELV+ R+AMLGVAG++  ++L   GI N+P WY+AG 
Subjt:  RALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGK

Query:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----REKEIANGRLAMLAFLGFIVQH
         ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     + KEI NGRLAM+A LGF VQ 
Subjt:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----REKEIANGRLAMLAFLGFIVQH

Query:  NATGKGPFDNFMQHISDPWHNTIVQTL
        + T  GP DN ++H+S+PWH TI+QTL
Subjt:  NATGKGPFDNFMQHISDPWHNTIVQTL

AT1G45474.2 photosystem I light harvesting complex gene 51.5e-5648.46Show/hide
Query:  RALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGK
        R  SVK     I     VE  +  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WY QAELV+ R+AMLGVAG++  ++L   GI N+P WY+AG 
Subjt:  RALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGK

Query:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----REKEIANGRLAMLAFLGFIVQH
         ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     + KEI NGRLAM+A LGF VQ 
Subjt:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----REKEIANGRLAMLAFLGFIVQH

Query:  NATGKGPFDNFMQHISDPWHNTIVQTL
        + T  GP DN ++H+S+PWH TI+QTL
Subjt:  NATGKGPFDNFMQHISDPWHNTIVQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.2e-12080.72Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSI-PNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNG
        MATV T ASA++FRPC S+ RFL+GSSG+ NR LS     SS   ++FKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+ QAELVNG
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSI-PNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNG

Query:  RWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGM+LPEV T  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQT
        A+EKE+ANGRLAMLAFLGF+VQHN TGKGPF+N +QH+SDPWHNTIVQT
Subjt:  AREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTIVQT

AT3G61470.1 photosystem I light harvesting complex gene 22.6e-6147.83Show/hide
Query:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTT--SSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVN
        MA+ +  +SA       S   FL G   +  + L+V   +   +   A   +  +  W PG   P +LDGSLPGD GFDPLGL+ DP++L+W  QAE+V+
Subjt:  MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTT--SSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVN

Query:  GRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF---
         RWAMLG AG+ +PE LT  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +   
Subjt:  GRWAMLGVAGMVLPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF---

Query:  --EPTLEAREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTI
              E R KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI
Subjt:  --EPTLEAREKEIANGRLAMLAFLGFIVQHNATGKGPFDNFMQHISDPWHNTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGTCATTACTCAGGCTTCTGCCACTGTCTTCCGGCCATGTGCTTCAAGATCGAGGTTTCTCTCGGGGTCCTCGGGAAAGTTTAACAGAGCCTTGTCTGTTAA
GCCAACAACTTCTTCAATTCCTAATGCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCGGGTTTGCCATCACCAACTTATCTTGATGGAAGCCTTCCAGGTGACA
ACGGATTTGATCCTCTAGGACTTGCAGAGGATCCCGAAAACTTGAGGTGGTATACGCAAGCCGAGCTAGTGAATGGTCGATGGGCGATGCTCGGAGTTGCAGGTATGGTA
TTGCCTGAAGTCTTGACAAATTATGGAATCATCAATGTACCAAAATGGTACGATGCGGGGAAAGCAGAGTATTTTGCATCGTCATCAACTCTCTTTGTGATTGAGTTCAT
TCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCAGGAAGTGTAAATCAAGATCCAATTTTTAAGCAATACAGCTTGCCACCAAATGATGTTGGGT
ACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAGAGAAAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATTCTTGGGATTTATTGTT
CAACACAACGCGACTGGAAAAGGTCCATTTGACAACTTCATGCAGCACATTTCAGACCCATGGCACAACACAATAGTTCAAACACTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
AGCTGGCCTACACCATCTTTCTTCAACCAACAAAAACAAAGATTTAGATTTATAGATATGGCAATGGACTCTAAGATAAAGGATAAGGGTTCTTTTTGTTCCTATTGGTT
CATCTAAAAATTCATAAAACTCATCTTAGTCATCTGATCCTCAACTTTCATACTTTCTAACCCTTGATTTCCATCAACCAAATGAACACCCTAATCTTAAATGCCATGCA
CAAAATACACTTCTTGAACTCACACCAAAACCAGGCTTTCTTCTACCACCCTTCTTGCTGAAAAAATGGCAACTGTCATTACTCAGGCTTCTGCCACTGTCTTCCGGCCA
TGTGCTTCAAGATCGAGGTTTCTCTCGGGGTCCTCGGGAAAGTTTAACAGAGCCTTGTCTGTTAAGCCAACAACTTCTTCAATTCCTAATGCTTTCAAAGTTGAGGCCAA
GAAAGGAGAGTGGTTGCCGGGTTTGCCATCACCAACTTATCTTGATGGAAGCCTTCCAGGTGACAACGGATTTGATCCTCTAGGACTTGCAGAGGATCCCGAAAACTTGA
GGTGGTATACGCAAGCCGAGCTAGTGAATGGTCGATGGGCGATGCTCGGAGTTGCAGGTATGGTATTGCCTGAAGTCTTGACAAATTATGGAATCATCAATGTACCAAAA
TGGTACGATGCGGGGAAAGCAGAGTATTTTGCATCGTCATCAACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAA
CCCAGGAAGTGTAAATCAAGATCCAATTTTTAAGCAATACAGCTTGCCACCAAATGATGTTGGGTACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTG
AGGCCAGAGAAAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATTCTTGGGATTTATTGTTCAACACAACGCGACTGGAAAAGGTCCATTTGACAACTTCATGCAG
CACATTTCAGACCCATGGCACAACACAATAGTTCAAACACTAAGGTGATAGGAGACAATAAAATATATGCAAGAAGAATAAGTGATCAGTGTGATTGTAGAGAAGGGAAC
TATCGGTGTACAATATGGTAGCAGTTATATGAATGTAGTGTAAGCATGGAACTTGGTTTTAACCGAGAAAGAAAGAATGTAATCACGTCGACTTCTTTGATTTTCTCGAA
ACTTGATATAGAAATATGAAATTCGCATCCATGTTTTACAATAGCTCAATGTACAGCTAAGGAAACCAGAAACCCCCAAATACTTTACAACTCTTCCATGAGG
Protein sequenceShow/hide protein sequence
MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMV
LPEVLTNYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIV
QHNATGKGPFDNFMQHISDPWHNTIVQTLR