; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G05880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G05880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr1:3712165..3713636
RNA-Seq ExpressionCSPI01G05880
SyntenyCSPI01G05880
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.6e-19273.37Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.6e-19273.37Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.5e-19173.17Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL A+LPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TYK10332.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.5e-19178.88Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFA VARMTSVR LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ATYLKKLH---ELGGLGLPRLASPLLNLDL---------PPALTTMPFLHDRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTS
         T  ++++     G    P     LL L +         P A++ +     +   M+DLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+
Subjt:  ATYLKKLH---ELGGLGLPRLASPLLNLDL---------PPALTTMPFLHDRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTS

Query:  STPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDP
        STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVT PDIAY VHIVSQFMAAPRTIHFT VLRILRYVKGTLGHGLQFSSQSSLVLSGY DADWAGDP
Subjt:  STPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDP

Query:  TDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHH
        TDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADAT EL+WLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHH
Subjt:  TDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHH

Query:  LLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LLS+TLLL+ VST EQPADIFTKALPS RF  + TKL+L ATLPP
Subjt:  LLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-19073.17Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEKTHTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+ LLL+ VST EQPADIFTKALPS RF  +  KLKL ATLPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-19273.37Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-19273.37Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-19173.17Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL A+LPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3CGF8 Retrovirus-related Pol polyprotein from transposon TNT 1-944.6e-19178.88Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEK HTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFA VARMTSVR LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ATYLKKLH---ELGGLGLPRLASPLLNLDL---------PPALTTMPFLHDRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTS
         T  ++++     G    P     LL L +         P A++ +     +   M+DLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+
Subjt:  ATYLKKLH---ELGGLGLPRLASPLLNLDL---------PPALTTMPFLHDRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTS

Query:  STPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDP
        STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVT PDIAY VHIVSQFMAAPRTIHFT VLRILRYVKGTLGHGLQFSSQSSLVLSGY DADWAGDP
Subjt:  STPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDP

Query:  TDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHH
        TDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADAT EL+WLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHH
Subjt:  TDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHH

Query:  LLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LLS+TLLL+ VST EQPADIFTKALPS RF  + TKL+L ATLPP
Subjt:  LLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-946.0e-19173.17Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT
        M++ELQALEKTHTWDYVDLPPGKRPIGCK IYKIKTHSDGTIERYKARLVAKGYSQE GIDYEETFAPVARMTSVR+LL VAAAKQW       K  FL 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWM-----SKMHFLT

Query:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ
                                                AT+   + +LG    P             +   LL +D        P A++ +     + 
Subjt:  ----------------------------------------ATYLKKLHELGGLGLPR------------LASPLLNLD-------LPPALTTMPFLHDRQ

Query:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
          MKDLGSLNYFLGLEVS RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA
Subjt:  LMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMA

Query:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL
        APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWL
Subjt:  APRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWL

Query:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+ LLL+ VST EQPADIFTKALPS RF  +  KLKL ATLPP
Subjt:  LADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.9e-5730.91Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKMH-------F
        ++ EL A +  +TW     P  K  +  + ++ +K +  G   RYKARLVA+G++Q+  IDYEETFAPVAR++S R +L +    Q+  K+H       F
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKMH-------F

Query:  LTATYLKKLHELGGLGLPRLASPLLNLD----------------LPPALTTMPFLHD-----------------------------------------RQ
        L  T  ++++     G+   +  +  L+                   AL    F++                                          R 
Subjt:  LTATYLKKLHELGGLGLPRLASPLLNLD----------------LPPALTTMPFLHD-----------------------------------------RQ

Query:  LM----MKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTV-TRPDIAYAVHIV
        LM    M DL  + +F+G+ +  + D   LSQ+ Y   ++++  + +    STPL   ++    +    D  +  R L+G L+Y+ + TRPD+  AV+I+
Subjt:  LM----MKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTV-TRPDIAYAVHIV

Query:  SQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVISRSSTESEYRALADATA
        S++ +   +  +  + R+LRY+KGT+   L F    +    + GY D+DWAG   DR+STTGY F + D +LI W +K+Q+ ++ SSTE+EY AL +A  
Subjt:  SQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVISRSSTESEYRALADATA

Query:  ELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI
        E +WL++LL  + +  + P  ++ DN+  I IA+N   H+R KHI+   HF R  + +N + L  + T  Q ADIFTK LP+ RF  L  KL L+
Subjt:  ELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-6433.74Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAA----------------
        M EE+++L+K  T+  V+LP GKRP+ CK ++K+K   D  + RYKARLV KG+ Q+ GID++E F+PV +MTS+RT+L +AA+                
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAA----------------

Query:  --------------------------------------KQWMSKMHFL------------TATYLKKLHELGGLGLPRLASPLLNLDLPPAL-TTMPFLH
                                              +QW  K                   Y K+  E   + L      +L +     L   +    
Subjt:  --------------------------------------KQWMSKMHFL------------TATYLKKLHELGGLGLPRLASPLLNLDLPPAL-TTMPFLH

Query:  DRQLMMKDLGSLNYFLGLEV--SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHL------TPFDGVPLDDASLYRQLVGSLIYLTV-TRPDI
         +   MKDLG     LG+++     S    LSQ KY   ++ R  + ++   STPL  H+ L      T  +         Y   VGSL+Y  V TRPDI
Subjt:  DRQLMMKDLGSLNYFLGLEV--SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHL------TPFDGVPLDDASLYRQLVGSLIYLTV-TRPDI

Query:  AYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALA
        A+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L GY+DAD AGD  +R+S+TGY F      ISW+SK Q  ++ S+TE+EY A  
Subjt:  AYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALA

Query:  DATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF
        +   E+IWL+  L ++G+ Q+   +++CD++SAI ++ N ++H RTKHI+   H++R  +   +L +  +ST E PAD+ TK +P N+F
Subjt:  DATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF

P92519 Uncharacterized mitochondrial protein AtMg008106.2e-4447.94Show/hide
Query:  MKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAP
        MKDLG ++YFLG+++     G  LSQ KYA  ++  +G+ D    STPL   ++ +        D S +R +VG+L YLT+TRPDI+YAV+IV Q M  P
Subjt:  MKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAP

Query:  RTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIW
            F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q  +SRSSTE+EYRALA   AEL W
Subjt:  RTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.6e-7837.55Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPI-GCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKM-----HFL
        M  E+ A    HTWD V  PP    I GC+ I+  K +SDG++ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L VA  + W  +       FL
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPI-GCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKM-----HFL

Query:  TAT--------------------YLKKLHE-LGGLGLPRLASPLLNLDLPPALTTMPFLH----------------------------------------
          T                    Y+ KL + L GL   + A     ++L   L T+ F++                                        
Subjt:  TAT--------------------YLKKLHE-LGGLGLPRLASPLLNLDLPPALTTMPFLH----------------------------------------

Query:  ---DRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHI
            ++  +KD   L+YFLG+E      G  LSQ +Y  DL+AR+ +  +   +TP+ P   L+ + G  L D + YR +VGSL YL  TRPDI+YAV+ 
Subjt:  ---DRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHI

Query:  VSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAEL
        +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  + RSSTE+EYR++A+ ++E+
Subjt:  VSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAEL

Query:  IWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
         W+  LL ++G+    P +++CDN  A  +  N VFH R KHI  D HF+R+ + S  L +  VST +Q AD  TK L    F +  +K+  +  +PP
Subjt:  IWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-7636.64Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPI-GCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKM-----HFL
        M  E+ A    HTWD V  PP    I GC+ I+  K +SDG++ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L VA  + W  +       FL
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPI-GCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKM-----HFL

Query:  TATYLKKLHELGGLG---------LPRLASPLLNLDLPPA---------LTTMPFLH-------------------------------------------
          T   +++     G         + RL   +  L   P          L T+ F++                                           
Subjt:  TATYLKKLHELGGLG---------LPRLASPLLNLDLPPA---------LTTMPFLH-------------------------------------------

Query:  DRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQ
         ++  +K+   L+YFLG+E      G  LSQ +Y  DL+AR+ +  +   +TP+     LT   G  L D + YR +VGSL YL  TRPD++YAV+ +SQ
Subjt:  DRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQ

Query:  FMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWL
        +M  P   H+ A+ R+LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  + RSSTE+EYR++A+ ++EL W+
Subjt:  FMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWL

Query:  RWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLP
          LL ++G+    P +++CDN  A  +  N VFH R KHI  D HF+R+ + S  L +  VST +Q AD  TK L    F +   K+ +I   P
Subjt:  RWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-9141.67Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKMHFL------
        MD+E+ A+E THTW+   LPP K+PIGCK +YKIK +SDGTIERYKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +L ++A   +   +H L      
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKMHFL------

Query:  ----------------------------TATYLKK----------------LHELGGLGLPRLASP---LLNLDLPPALTTMPFLHD-------------
                                       YLKK                   L G G  +  S     L +     L  + ++ D             
Subjt:  ----------------------------TATYLKK----------------LHELGGLGLPRLASP---LLNLDLPPALTTMPFLHD-------------

Query:  --RQL----MMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAV
           QL     ++DLG L YFLGLE++  + G  + Q KYA DL+  +G+     SS P+DP V  +   G    DA  YR+L+G L+YL +TR DI++AV
Subjt:  --RQL----MMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAV

Query:  HIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATA
        + +SQF  APR  H  AV++IL Y+KGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+SKKQ V+S+SS E+EYRAL+ AT 
Subjt:  HIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATA

Query:  ELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKAL
        E++WL     ++ +P   PTLL CDN +AI IA N VFHERTKHIE+DCH VR   +    L  S    ++  D FT+ L
Subjt:  ELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKAL

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.6e-1851.9Show/hide
Query:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L YVKGT+G GL +S+ S L L  ++D+DWA  P  RRS TG+C
Subjt:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein4.4e-4547.94Show/hide
Query:  MKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAP
        MKDLG ++YFLG+++     G  LSQ KYA  ++  +G+ D    STPL   ++ +        D S +R +VG+L YLT+TRPDI+YAV+IV Q M  P
Subjt:  MKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAP

Query:  RTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIW
            F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q  +SRSSTE+EYRALA   AEL W
Subjt:  RTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.2e-2147.66Show/hide
Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQ------WMSKMHFL
        M EEL AL +  TW  V  P  +  +GCK ++K K HSDGT++R KARLVAKG+ QE GI + ET++PV R  ++RT+L VA   +      WM KMHF 
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQ------WMSKMHFL

Query:  TATYLKK
           + KK
Subjt:  TATYLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGATTTACCTCCCGGTAAAAGACCCATTGGTTGCAAATGTATTTACAAAATCAAAACTCA
CTCTGATGGAACTATTGAACGTTATAAAGCTCGGCTTGTTGCAAAAGGATACTCACAAGAAAATGGGATTGACTATGAAGAAACATTTGCCCCTGTTGCCCGGATGACAT
CCGTTCGAACCTTGTTAGTTGTTGCTGCTGCCAAACAGTGGATGTCAAAAATGCATTTCTTAACGGCAACCTATCTGAAGAAGCTCCACGAGCTTGGTGGGCTTGGTTTG
CCACGTTTAGCTTCACCATTACTCAACTTGGATTTACCTCCAGCTCTCACGACAATGCCCTTTTTACACGACAGACAACTCATGATGAAAGACCTTGGATCTCTCAATTA
CTTTCTCGGTCTTGAAGTCTCTCACCGTTCAGATGGTTATCTGTTATCTCAAGCGAAATATGCATCTGATCTAATAGCACGCTCAGGAATTACAGACTCCACCACATCTT
CAACACCGTTAGATCCTCATGTCCATCTAACTCCGTTTGATGGTGTTCCTCTTGACGATGCAAGCTTGTATCGGCAACTTGTTGGCAGTCTTATATACCTAACAGTAACT
CGCCCAGATATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTCGAACAATTCATTTCACTGCTGTTCTACGCATACTTCGCTATGTCAAAGGCACCTT
GGGACATGGTCTTCAATTCTCATCTCAGTCTTCCCTTGTGTTGTCGGGATATTCTGATGCTGATTGGGCGGGGGATCCTACTGATCGACGATCCACTACAGGATACTGTT
TTTACTTAGGTGATTCTCTCATCTCATGGCGTAGTAAGAAACAAAGTGTTATATCTCGTTCCAGTACGGAATCTGAATATCGTGCTCTGGCTGATGCTACAGCTGAACTT
ATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCTCCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCA
TGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCCTAAGCAACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCT
TCACCAAAGCCTTGCCATCTAATCGATTCTGTCACTTACTTACCAAACTCAAGTTGATCGCTACTCTACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGATTTACCTCCCGGTAAAAGACCCATTGGTTGCAAATGTATTTACAAAATCAAAACTCA
CTCTGATGGAACTATTGAACGTTATAAAGCTCGGCTTGTTGCAAAAGGATACTCACAAGAAAATGGGATTGACTATGAAGAAACATTTGCCCCTGTTGCCCGGATGACAT
CCGTTCGAACCTTGTTAGTTGTTGCTGCTGCCAAACAGTGGATGTCAAAAATGCATTTCTTAACGGCAACCTATCTGAAGAAGCTCCACGAGCTTGGTGGGCTTGGTTTG
CCACGTTTAGCTTCACCATTACTCAACTTGGATTTACCTCCAGCTCTCACGACAATGCCCTTTTTACACGACAGACAACTCATGATGAAAGACCTTGGATCTCTCAATTA
CTTTCTCGGTCTTGAAGTCTCTCACCGTTCAGATGGTTATCTGTTATCTCAAGCGAAATATGCATCTGATCTAATAGCACGCTCAGGAATTACAGACTCCACCACATCTT
CAACACCGTTAGATCCTCATGTCCATCTAACTCCGTTTGATGGTGTTCCTCTTGACGATGCAAGCTTGTATCGGCAACTTGTTGGCAGTCTTATATACCTAACAGTAACT
CGCCCAGATATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTCGAACAATTCATTTCACTGCTGTTCTACGCATACTTCGCTATGTCAAAGGCACCTT
GGGACATGGTCTTCAATTCTCATCTCAGTCTTCCCTTGTGTTGTCGGGATATTCTGATGCTGATTGGGCGGGGGATCCTACTGATCGACGATCCACTACAGGATACTGTT
TTTACTTAGGTGATTCTCTCATCTCATGGCGTAGTAAGAAACAAAGTGTTATATCTCGTTCCAGTACGGAATCTGAATATCGTGCTCTGGCTGATGCTACAGCTGAACTT
ATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCTCCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCA
TGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCCTAAGCAACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCT
TCACCAAAGCCTTGCCATCTAATCGATTCTGTCACTTACTTACCAAACTCAAGTTGATCGCTACTCTACCACCTTGA
Protein sequenceShow/hide protein sequence
MDEELQALEKTHTWDYVDLPPGKRPIGCKCIYKIKTHSDGTIERYKARLVAKGYSQENGIDYEETFAPVARMTSVRTLLVVAAAKQWMSKMHFLTATYLKKLHELGGLGL
PRLASPLLNLDLPPALTTMPFLHDRQLMMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVT
RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAEL
IWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP