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CSPI01G06440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G06440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPHD-type domain-containing protein
Genome locationChr1:4023245..4023792
RNA-Seq ExpressionCSPI01G06440
SyntenyCSPI01G06440
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137454.2 uncharacterized protein LOC101208450 [Cucumis sativus]2.4e-28100Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLT
        MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLT
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLT

XP_008454700.1 PREDICTED: uncharacterized protein LOC103495032 [Cucumis melo]2.5e-2595.16Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MARCGLEPPPKPTKQYVS SVC+HTEEEIRKLHRSTLMPDSCRKCFM FVKDVVNAIMLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

XP_022924090.1 E3 ubiquitin-protein ligase UHRF1-like [Cucurbita moschata]3.5e-1974.19Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MA CGLEPPPKP+K+++S  VCKHTEEE+ +LHRSTLMP+SCR+CF+ +VKDVVNA+MLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

XP_023519898.1 uncharacterized protein LOC111783226 [Cucurbita pepo subsp. pepo]7.1e-2075.81Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MA CGLEPPPKP+K+++S SVCKHTEEE+ +LHRSTLMP+SCR+CF+ +VKDVVNA+MLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

XP_038895334.1 uncharacterized protein LOC120083586 [Benincasa hispida]9.3e-2075.81Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MA CGLEPPP+P+K+++S SVC+HT+EEI++LHRSTLMP+SCR+CF+ FVKDVVNAIMLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

TrEMBL top hitse value%identityAlignment
A0A0A0LQB4 Uncharacterized protein1.2e-28100Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLT
        MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLT
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLT

A0A1S3BYS2 uncharacterized protein LOC1034950321.2e-2595.16Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MARCGLEPPPKPTKQYVS SVC+HTEEEIRKLHRSTLMPDSCRKCFM FVKDVVNAIMLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

A0A6J1C877 uncharacterized protein LOC111008874 isoform X11.4e-1364.52Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        M  CGLEPPP+ +K+++S SVC H  E+ R+LHRSTLM DSCR+CF+ FVKDVVN +M EKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

A0A6J1EDT4 E3 ubiquitin-protein ligase UHRF1-like1.7e-1974.19Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MA CGLEPPPKP+K+++S  VCKHTEEE+ +LHRSTLMP+SCR+CF+ +VKDVVNA+MLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

A0A6J1KFL6 uncharacterized protein LOC1114953631.7e-1974.19Show/hide
Query:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL
        MA CGLEPPPKP+K+++S SVCKHTEEE+ +LHRSTL P+SCR+CF+ +VKDVVNA+MLEKL
Subjt:  MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGATGTGGTTTAGAACCCCCACCAAAACCAACAAAACAATACGTATCGTCCTCGGTTTGCAAACACACAGAAGAAGAAATCCGGAAGCTTCACAGGTCGACTCT
AATGCCGGATTCTTGCAGGAAATGCTTCATGTGGTTTGTGAAAGATGTTGTTAATGCCATTATGTTAGAAAAACTAACGTGCTTTTGTGGACGCTCTGTGAAAGCACTCA
GAAAAGCGCTTATGACAAAATCACGTGACTTTGAAGAACGTCAGCAGAAGATGGACATGGACATGGACGTGGACATCGTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
GCGGAGTAATAATTAGATAAGATTTATGCAGGATATGAAAGGTACAAAGAAGTGACAAGGCTAGCAACACACACAATCATGGCAAGATGTGGTTTAGAACCCCCACCAAA
ACCAACAAAACAATACGTATCGTCCTCGGTTTGCAAACACACAGAAGAAGAAATCCGGAAGCTTCACAGGTCGACTCTAATGCCGGATTCTTGCAGGAAATGCTTCATGT
GGTTTGTGAAAGATGTTGTTAATGCCATTATGTTAGAAAAACTAACGTGCTTTTGTGGACGCTCTGTGAAAGCACTCAGAAAAGCGCTTATGACAAAATCACGTGACTTT
GAAGAACGTCAGCAGAAGATGGACATGGACATGGACGTGGACATCGTCTTTTAG
Protein sequenceShow/hide protein sequence
MARCGLEPPPKPTKQYVSSSVCKHTEEEIRKLHRSTLMPDSCRKCFMWFVKDVVNAIMLEKLTCFCGRSVKALRKALMTKSRDFEERQQKMDMDMDVDIVF