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CSPI01G06480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G06480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationChr1:4045968..4046453
RNA-Seq ExpressionCSPI01G06480
SyntenyCSPI01G06480
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]1.2e-2162.38Show/hide
Query:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIP
        +GG  R   + AEMVEEWK+MI+  CVSSAIGIATVSV I+T  +LP +FQ LSI VLLCF  + FA+M   IF+T+SKILYCVGG L  ++ FIATAIP
Subjt:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIP

Query:  F
        +
Subjt:  F

KAE8652532.1 hypothetical protein Csa_023780, partial [Cucumis sativus]5.3e-1790.74Show/hide
Query:  LWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQI
        LWESLKGEEESGD  G GGRKLTM AEMVEEWKEMIVALCVSSA+GIATVSVQI
Subjt:  LWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQI

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]7.1e-3864.19Show/hide
Query:  WVGSCIRKACRLWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFK
        W  +CI KA RLWE L+   E G  GG         AEMVEEWK+MIVA CVSSAI IATVSVQIE  K+LP+ F FLS+ +LLCFGF+ F KMTK I K
Subjt:  WVGSCIRKACRLWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFK

Query:  TVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLI
         VS+ILYCVGG LGVTA FIA+AIP+A YFQIIIF++YL+F  +FML+
Subjt:  TVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLI

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1453.27Show/hide
Query:  EMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFIL
        EM+ +W+ M+V  C+ +AI IATVSVQI+T  +L   FQFLS  ++ CF F   AK+ K   + VS ILY +GGF  VTAFFIA AIP+A +FQI+   L
Subjt:  EMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFIL

Query:  YLLFCFI
        YL+F FI
Subjt:  YLLFCFI

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]2.2e-1565.43Show/hide
Query:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKIL
        +GG  R L +VAEMVEE KEMI+  C+SSAIGIATVSVQ +T  +LP +FQFLSI VL+CF  +GFA+M   IFKT+SKIL
Subjt:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein4.5e-3062.22Show/hide
Query:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIP
        +GG  R L +VAEMVEE KEMI+  C+SSAIGIATVSVQ +T  +LP +FQFLSI VL+CF  +GFA+M   IFKT+SKILYC GGFL  T  FIATAIP
Subjt:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIP

Query:  FAPYFQIIIFILYLLFCFIF-MLITTIHN-QQPSS
        +  +F II+ +LY +FC IF MLI+  HN   PSS
Subjt:  FAPYFQIIIFILYLLFCFIF-MLITTIHN-QQPSS

A0A0A0LEV1 Uncharacterized protein2.8e-0835.48Show/hide
Query:  MVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIII
        +VA+MVEE K  I+    +    IA +SVQ +   +LP +F+F+SI  LLC      A +    FKT +K+LY +G F  +T++ IA AIP   YF +++
Subjt:  MVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIII

Query:  FILYLLFCFIFMLITTIHNQQPSS
         +L+L+ C   +++ +     P+S
Subjt:  FILYLLFCFIFMLITTIHNQQPSS

A0A0A0LQB6 Uncharacterized protein1.2e-8399.38Show/hide
Query:  MCRCWVGSCIRKACRLWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTK
        MCRCWVGSCIRKACRLWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGF+GFAKMTK
Subjt:  MCRCWVGSCIRKACRLWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTK

Query:  PIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLITTIHNQQPSS
        PIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLITTIHNQQPSS
Subjt:  PIFKTVSKILYCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLITTIHNQQPSS

A0A0A0LQP5 Uncharacterized protein1.7e-2151.52Show/hide
Query:  RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPF-APY
        R L +VAE VEE KE I+ LCVSSAIGI T SVQI+T  +LP +FQ LS+ +LLCF  + FA+M + +F+T+S+ILYCVG F+  T  FIATAI +   +
Subjt:  RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIPF-APY

Query:  FQIIIFILYLLF---CFIFMLITTIHNQQPSS
        F  I+ +LY +F   C IF++  +I +  PSS
Subjt:  FQIIIFILYLLF---CFIFMLITTIHNQQPSS

A0A0A0LSX4 Uncharacterized protein1.2e-2261.9Show/hide
Query:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIP
        +GG  R   + AEMVEEWK+MI+  CVSSAIGIATVSV I+T  +LP +FQ LSI VLLCF  + FA+M   IF+T+SKILYCVGG L  ++ FIATAIP
Subjt:  HGG--RKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKILYCVGGFLGVTAFFIATAIP

Query:  FAPYF
        +A  F
Subjt:  FAPYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCGTTGTTGGGTTGGAAGTTGCATTAGAAAGGCGTGTAGGTTATGGGAATCATTAAAGGGTGAAGAAGAGAGTGGAGACAGCGGCGGCCATGGGGGGAGGAAACT
GACGATGGTGGCGGAGATGGTGGAGGAATGGAAGGAGATGATAGTAGCATTGTGTGTATCATCAGCCATAGGGATAGCAACAGTGTCCGTTCAAATAGAAACAAATAAAC
AACTTCCGAAAACATTTCAGTTTCTATCCATTGTTGTGTTGCTTTGTTTTGGGTTCATGGGGTTTGCAAAAATGACAAAACCCATTTTCAAAACAGTTTCAAAGATATTG
TACTGTGTGGGAGGGTTTTTGGGTGTTACAGCCTTTTTCATAGCCACTGCCATTCCATTTGCTCCATACTTTCAGATCATTATCTTCATCCTTTACTTGCTCTTTTGTTT
CATCTTCATGCTCATCACCACCATTCACAACCAACAACCTTCTTCC
mRNA sequenceShow/hide mRNA sequence
ATGTGTCGTTGTTGGGTTGGAAGTTGCATTAGAAAGGCGTGTAGGTTATGGGAATCATTAAAGGGTGAAGAAGAGAGTGGAGACAGCGGCGGCCATGGGGGGAGGAAACT
GACGATGGTGGCGGAGATGGTGGAGGAATGGAAGGAGATGATAGTAGCATTGTGTGTATCATCAGCCATAGGGATAGCAACAGTGTCCGTTCAAATAGAAACAAATAAAC
AACTTCCGAAAACATTTCAGTTTCTATCCATTGTTGTGTTGCTTTGTTTTGGGTTCATGGGGTTTGCAAAAATGACAAAACCCATTTTCAAAACAGTTTCAAAGATATTG
TACTGTGTGGGAGGGTTTTTGGGTGTTACAGCCTTTTTCATAGCCACTGCCATTCCATTTGCTCCATACTTTCAGATCATTATCTTCATCCTTTACTTGCTCTTTTGTTT
CATCTTCATGCTCATCACCACCATTCACAACCAACAACCTTCTTCC
Protein sequenceShow/hide protein sequence
MCRCWVGSCIRKACRLWESLKGEEESGDSGGHGGRKLTMVAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKQLPKTFQFLSIVVLLCFGFMGFAKMTKPIFKTVSKIL
YCVGGFLGVTAFFIATAIPFAPYFQIIIFILYLLFCFIFMLITTIHNQQPSS