; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G06490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G06490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonucloprotein
Genome locationChr1:4051528..4053077
RNA-Seq ExpressionCSPI01G06490
SyntenyCSPI01G06490
Gene Ontology termsGO:0000469 - cleavage involved in rRNA processing (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0031118 - rRNA pseudouridine synthesis (biological process)
GO:0031120 - snRNA pseudouridine synthesis (biological process)
GO:0031429 - box H/ACA snoRNP complex (cellular component)
GO:0034513 - box H/ACA snoRNA binding (molecular function)
InterPro domainsIPR002415 - H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 - Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137455.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucumis sativus]1.8e-78100Show/hide
Query:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
        MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
Subjt:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY

Query:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
Subjt:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

XP_008454886.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Cucumis melo]4.9e-7698.11Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKSR KDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEES+IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

XP_022955313.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita moschata]1.0e-7393.71Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKS LKDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

XP_023541121.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita pepo subsp. pepo]6.0e-7494.34Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKS LKDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVVAEVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

XP_038894923.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Benincasa hispida]7.8e-7494.97Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKS  KDK+KE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKAD++QVVAEVSELTSTLF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

TrEMBL top hitse value%identityAlignment
A0A0A0LVP3 Ribonucloprotein8.7e-79100Show/hide
Query:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
        MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
Subjt:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY

Query:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
Subjt:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

A0A1S3C0C8 Ribonucloprotein2.4e-7698.11Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKSR KDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEES+IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

A0A5D3BKS6 Ribonucloprotein2.4e-7698.11Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKSR KDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEES+IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

A0A6J1GTK9 Ribonucloprotein4.9e-7493.71Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        MGSDSEAEKS LKDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

A0A6J1K350 Ribonucloprotein2.5e-7393.71Show/hide
Query:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        M SDSEAEKS LKDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSRLKDKEKE-KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVVAEVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF

SwissProt top hitse value%identityAlignment
P32495 H/ACA ribonucleoprotein complex subunit NHP22.8e-3449.36Show/hide
Query:  MGSDSEAEKSRLKDK---EKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIR
        MG D++  K   + K     E ++ A+ P AKPLA KKL K+ LK V+KA++ K +KRGVKEVVK++R+G+KGL VIAG+ISP DVI+H+P+LCE+  + 
Subjt:  MGSDSEAEKSRLKDK---EKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIR

Query:  YVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSEL
        Y+++PSK+DL  AG+TKRPT  V +    NK + G  ++E+ K  F++VV EV  L
Subjt:  YVYVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSEL

Q6NTV9 H/ACA ribonucleoprotein complex subunit 2-like protein7.7e-2450.46Show/hide
Query:  KEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTK
        K  ++ L  L P+AKPLAG+KL K+  K V+KA + K ++RGVKEV K I +G+KG+ V+AG+  PI+V  H+P++CE+  I Y YVPSK DL  A  +K
Subjt:  KEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTK

Query:  RPTCCVLVQ
        RPTC +L++
Subjt:  RPTCCVLVQ

Q8I7X7 H/ACA ribonucleoprotein complex subunit 2-like protein9.1e-2539.47Show/hide
Query:  DSEAEKSRLKDKEKEKKLLA--LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYV
        + E      +D+E+  ++LA  + PIA PLA +KL KR  K V+KA++ K +++G+++V K I++G++G+ +IAG+ +PI+V  H+P++CE+++I Y YV
Subjt:  DSEAEKSRLKDKEKEKKLLA--LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYV

Query:  PSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSEL
        P+K+DL  A  +KRPTCCVL+  KPN         E  ++ +D+ + +V+ L
Subjt:  PSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSEL

Q9LEY9 H/ACA ribonucleoprotein complex subunit 2-like protein1.9e-5471.97Show/hide
Query:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
        MGSD+EAEKS    KEK+K  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITH+PILCEE+ + YVY
Subjt:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY

Query:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTL
        VPSKEDLA AG+TKRPTCCVLV  KP KG+L + E  KLK D++QV  ++ EL +++
Subjt:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTL

Q9P7H0 H/ACA ribonucleoprotein complex subunit nhp23.6e-2945.45Show/hide
Query:  MGSDSEAEK-SRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV
        M  D +  K S   + E +  L AL PIAKPLA KKL K+ +K V+KA++ K + RGVKEVVK++R+G+KGL ++AG+ISP+DVI+H+P+LCE++ + Y+
Subjt:  MGSDSEAEK-SRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSEL
        Y  SKE L  A +TKRPT CV++     K ++   E+   K  +++++ EV  L
Subjt:  YVPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSEL

Arabidopsis top hitse value%identityAlignment
AT4G12600.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein3.7e-1332.81Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTKRPTCCVLVQTK
        P A PLA  +L    L LV++A  YK LK+G  E  K++ RG     V+A +  P++++ H+P+L E+  + YV+VPSK+ L  A    RP     V   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTKRPTCCVLVQTK

Query:  PNKGELGSTEQEKLKADFDQVVAEVSEL
               S E  +LK+    +   + +L
Subjt:  PNKGELGSTEQEKLKADFDQVVAEVSEL

AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6.3e-1332.03Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTKRPTCCVLVQTK
        P A PLA  +L    + LV++A  YK LK+G  E  K++ RG     V+A +  P++++ H+P+L E+  + YV+VPSK+ L  A    RP     V   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTKRPTCCVLVQTK

Query:  PNKGELGSTEQEKLKADFDQVVAEVSEL
               S E  +LK+    +   + +L
Subjt:  PNKGELGSTEQEKLKADFDQVVAEVSEL

AT5G08180.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.3e-5571.97Show/hide
Query:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
        MGSD+EAEKS    KEK+K  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITH+PILCEE+ + YVY
Subjt:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY

Query:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTL
        VPSKEDLA AG+TKRPTCCVLV  KP KG+L + E  KLK D++QV  ++ EL +++
Subjt:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTL

AT5G08180.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.3e-5571.97Show/hide
Query:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY
        MGSD+EAEKS    KEK+K  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITH+PILCEE+ + YVY
Subjt:  MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVY

Query:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTL
        VPSKEDLA AG+TKRPTCCVLV  KP KG+L + E  KLK D++QV  ++ EL +++
Subjt:  VPSKEDLANAGSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTL

AT5G20160.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein3.7e-1332.81Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTKRPTCCVLVQTK
        P A PLA  +L    L LV++A  YK LK+G  E  K++ RG     V+A +  P++++ H+P+L E+  + YV+VPSK+ L  A    RP     V   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANAGSTKRPTCCVLVQTK

Query:  PNKGELGSTEQEKLKADFDQVVAEVSEL
               S E  +LK+    +   + +L
Subjt:  PNKGELGSTEQEKLKADFDQVVAEVSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTGATAGCGAGGCAGAGAAGTCGCGTCTAAAGGACAAAGAAAAGGAGAAGAAGCTCTTGGCTCTTGCTCCAATTGCCAAACCCCTTGCGGGCAAAAAGCTCTG
CAAGCGTACCCTCAAGCTCGTTCGCAAAGCTGCTGAGTATAAGTGCTTGAAGCGGGGTGTAAAGGAGGTTGTCAAAAGCATAAGGCGCGGCCAAAAAGGATTGTGTGTAA
TAGCTGGAAACATTTCCCCCATTGACGTGATCACTCATGTTCCAATCTTATGTGAAGAATCAGAAATTCGTTACGTATATGTTCCCTCCAAGGAAGATCTTGCCAATGCT
GGGTCGACGAAGAGGCCAACATGTTGTGTGCTGGTACAAACAAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAAGCTGACTTTGACCAAGTTGT
AGCCGAAGTATCAGAACTTACTAGCACTCTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACGTGGGAGCTTGTTTCGCCTCCATCCTCACCTTAAACCCTAGTAATAAAGAAGAGACGAAGCCAAAAACCCAAGCAGGCACCAGTCTCCGTCGTCGTCAAAATCCC
ATTTTTCTCCGATAGTTCCATCTTCAATCCTCTTACGGAGGCAATGGGAAGTGATAGCGAGGCAGAGAAGTCGCGTCTAAAGGACAAAGAAAAGGAGAAGAAGCTCTTGG
CTCTTGCTCCAATTGCCAAACCCCTTGCGGGCAAAAAGCTCTGCAAGCGTACCCTCAAGCTCGTTCGCAAAGCTGCTGAGTATAAGTGCTTGAAGCGGGGTGTAAAGGAG
GTTGTCAAAAGCATAAGGCGCGGCCAAAAAGGATTGTGTGTAATAGCTGGAAACATTTCCCCCATTGACGTGATCACTCATGTTCCAATCTTATGTGAAGAATCAGAAAT
TCGTTACGTATATGTTCCCTCCAAGGAAGATCTTGCCAATGCTGGGTCGACGAAGAGGCCAACATGTTGTGTGCTGGTACAAACAAAGCCAAACAAAGGGGAGCTTGGAT
CAACTGAACAAGAGAAACTCAAAGCTGACTTTGACCAAGTTGTAGCCGAAGTATCAGAACTTACTAGCACTCTTTTTTGAATAGTAAAGTTGTTTCTTTATCTTCTCTCA
ATGTACTTGTAGCATTTCTCTTCAAACTGGTTAGTGTACTCTGTTTTACCCTCAAATTTGTTTGGTCTTATTCCATTTCAACTCAATCATCTCTCCCAA
Protein sequenceShow/hide protein sequence
MGSDSEAEKSRLKDKEKEKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHVPILCEESEIRYVYVPSKEDLANA
GSTKRPTCCVLVQTKPNKGELGSTEQEKLKADFDQVVAEVSELTSTLF