; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G06660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G06660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like
Genome locationChr1:4187693..4190575
RNA-Seq ExpressionCSPI01G06660
SyntenyCSPI01G06660
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:1903052 - positive regulation of proteolysis involved in cellular protein catabolic process (biological process)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0030674 - protein binding, bridging (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137466.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]1.5e-85100Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_008456997.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucumis melo]4.4e-8599.37Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022136971.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Momordica charantia]2.3e-8193.67Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRVPLSPN FF  T+PGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022954871.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucurbita moschata]6.8e-7891.14Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGR+PLSP  FF ST+PGDKYYFHKQCRNRS L M+SVAELGKGGGLLEKPA EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_038894047.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Benincasa hispida]2.3e-8194.94Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRV LSPN FF+STKPGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKP IEKTTPGRESEFDVRK RKTSPPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

TrEMBL top hitse value%identityAlignment
A0A0A0LSY6 ClpS domain-containing protein7.4e-86100Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A1S3C561 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like2.1e-8599.37Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1C511 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X11.1e-8193.67Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGRVPLSPN FF  T+PGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTLDNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1GS56 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic3.3e-7891.14Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGR+PLSP  FF ST+PGDKYYFHKQCRNRS L M+SVAELGKGGGLLEKPA EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1K0P0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like9.6e-7890.51Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL
        MEAAICGR+PLSP  FF ST+PGDKYYFHKQCRNRS L M+SVAELGKGGGLLEKP  EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVL
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic4.2e-2250.46Show/hide
Query:  GGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLS
        GG+++ P     T  ++    V +S+K  P Y+VLLHNDN+NKREYVV+VL+KV+  +T+D+AV  MQEAH  G+A+V+ C Q +AE +C  LR NGL S
Subjt:  GGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLS

Query:  SIEPASDGC
        +IEP   GC
Subjt:  SIEPASDGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS2.8e-1858.23Show/hide
Query:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP
        RK +P YRVLLHND+FN  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL SSIEP
Subjt:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS7.2e-1443.62Show/hide
Query:  TPGRESEFD--VRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP
        +PG  +  D    + RK SP Y+VLLHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ +VI+C    AE +C  L+  GL SSIEP
Subjt:  TPGRESEFD--VRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.0e-1556.16Show/hide
Query:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGL
        RK +P YRVLLHND+FN  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL
Subjt:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.5e-6274.38Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQ
        ME AICGR+ L+P+  F S K GDK+   K  C NRS LM +S  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K +PPYRV+LHNDNFNKREYVVQ
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQ

Query:  VLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMKVIPGMT+DNAVNIMQEAH NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.7e-6374.38Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQ
        ME AICGR+ L+P+  F S K GDK+   K  C NRS LM +S  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K +PPYRV+LHNDNFNKREYVVQ
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQ

Query:  VLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMKVIPGMT+DNAVNIMQEAH NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein9.9e-4358.13Show/hide
Query:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQ
        ME AICGR+ L+P+  F S K GDK+   K  C NRS LM +S  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K +PPYRV+LHNDNFNKREYVVQ
Subjt:  MEAAICGRVPLSPNQFFTSTKPGDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQ

Query:  VLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMK                               DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTTCACCCAACCAATTCTTCACCTCAACCAAGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGTGC
CTTAATGATGATATCAGTTGCTGAGCTTGGAAAAGGCGGGGGGTTGTTGGAAAAACCAGCAATAGAGAAGACAACTCCGGGCCGTGAATCTGAGTTTGATGTTAGGAAAT
CAAGGAAAACTTCTCCACCTTATCGAGTGTTGCTACATAATGACAATTTCAACAAGCGGGAATACGTTGTTCAAGTTCTGATGAAGGTGATTCCTGGAATGACACTTGAC
AATGCAGTCAACATAATGCAGGAAGCGCATTACAATGGGATGGCAGTGGTAATTATCTGCGCTCAAGTAGACGCAGAAGATCACTGCATGCAGCTTAGAGGCAATGGCCT
TCTCAGTTCAATCGAGCCTGCAAGCGATGGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
GTCGAAGCTCCTTTTACATTTTCTCTGTGAACCACTGAACCTTGCTCTTGCTGTACCAAATCACTCTTCATCCTTCAAACAGTTCTTCAAGCACGCTGAGAGAAGAGGGC
GACAGAGGCCATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTTCACCCAACCAATTCTTCACCTCAACCAAGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAA
ACCGGAGTGCCTTAATGATGATATCAGTTGCTGAGCTTGGAAAAGGCGGGGGGTTGTTGGAAAAACCAGCAATAGAGAAGACAACTCCGGGCCGTGAATCTGAGTTTGAT
GTTAGGAAATCAAGGAAAACTTCTCCACCTTATCGAGTGTTGCTACATAATGACAATTTCAACAAGCGGGAATACGTTGTTCAAGTTCTGATGAAGGTGATTCCTGGAAT
GACACTTGACAATGCAGTCAACATAATGCAGGAAGCGCATTACAATGGGATGGCAGTGGTAATTATCTGCGCTCAAGTAGACGCAGAAGATCACTGCATGCAGCTTAGAG
GCAATGGCCTTCTCAGTTCAATCGAGCCTGCAAGCGATGGTTGTTGAATAAGAAACATAGATTGTGTAATGTACTCTTTTTCCTCCCTTAGTTATCAGCCATATTAAAAT
TGCATGTCCTCAACTGCTACATTGTTGCAAGTTGCGCCTATGTACATAAATAGAGATACTTCATAAACAAACAATCTTCAATTGATGAATATAATTATCACTCTAGTTAT
GATATGAGTTGTATACACAAACACATCTTCCTTTTACTAAATTTTTTCTTTACTCG
Protein sequenceShow/hide protein sequence
MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLD
NAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC