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CSPI01G06980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G06980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:4401927..4402439
RNA-Seq ExpressionCSPI01G06980
SyntenyCSPI01G06980
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652552.1 hypothetical protein Csa_013579 [Cucumis sativus]3.9e-5098.04Show/hide
Query:  MDNENFPKKQELNWVSSLYSLKPISIVKMARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGC
        MDNENFPKKQ+LNWVSSLYSLKPISIVKMARLMREISSQNGSFGLAGGETYWLFWVALFTLCIIST+IFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGC
Subjt:  MDNENFPKKQELNWVSSLYSLKPISIVKMARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGC

Query:  GA
        GA
Subjt:  GA

KAF3438595.1 hypothetical protein FNV43_RR21358 [Rhamnella rubrinervis]3.5e-1460Show/hide
Query:  MREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
        M  +SS +GS   AG   Y   W+AL ++CI+S +IFSC+DG+SK++ ST D ELYGGGCAAGCGAGCGA
Subjt:  MREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

KAG6572949.1 hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1772.86Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGA
        MARL+ EI S +GSFGL+ G+   LF  ALFTLCIIS + FSCSDG+SK+RNST DVELYGGGCAAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGA

KAG6584341.1 hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2585.33Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMS-KDRNSTVDVELYGGGCAAGCGAGCGA
        MARLMRE  SQNGSFGLA G+ Y LFW ALFTLCIIST+IFSCSDGMS KDRNST DVELYG GCAAGCGAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMS-KDRNSTVDVELYGGGCAAGCGAGCGA

XP_015882794.1 uncharacterized protein LOC107418606 [Ziziphus jujuba]4.1e-1558.11Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
        M RL R+++S +GS    G   + + W+AL  +CIIS +IFSC+DG+SK++ ST D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU7 Uncharacterized protein5.5e-3498.65Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
        MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIIST+IFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

A0A2P5AQX4 Uncharacterized protein1.7e-1456.76Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALF-TLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCG
        M RL RE +  +G  G +   T+ +F++ L  TLCI+ST+IFSC+DG+SK++ S  D ELYGGGCAAGCGAGCG
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALF-TLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCG

A0A6P3ZT85 uncharacterized protein LOC1074186062.0e-1558.11Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
        M RL R+++S +GS    G   + + W+AL  +CIIS +IFSC+DG+SK++ ST D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

A0A803R004 Uncharacterized protein2.9e-1456.76Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
        M RL RE+++ +G  G   G         L TLCI+ST+IFSC+DG+SK++ S  D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

A0A803R005 Uncharacterized protein2.9e-1456.76Show/hide
Query:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA
        M RL RE+++ +G  G   G         L TLCI+ST+IFSC+DG+SK++ S  D ELYGGGCAAGCGAGCGA
Subjt:  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68238.1 unknown protein8.2e-0644.44Show/hide
Query:  GETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCG
        GE     W A+    +I+ VIFSCSD  SK   +    ++ G  CAAGCG GCG
Subjt:  GETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCG

AT3G18250.1 Putative membrane lipoprotein4.1e-0544.23Show/hide
Query:  YWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGC-AAGCGAGCG
        + + ++A+   CI+S ++FSC+DG+S D  +T      GGGC  AGCG GCG
Subjt:  YWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGC-AAGCGAGCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGGTTTCTTCATTATATTCTTTGAAACCCATCTCTATTGTAAAAATGGCAAGACTAATGAGAGAAATTAG
CAGTCAAAATGGAAGCTTTGGGCTCGCCGGCGGTGAAACTTATTGGTTGTTTTGGGTGGCTTTGTTTACACTCTGCATAATTTCCACTGTAATTTTCTCTTGCTCCGATG
GCATGTCGAAAGACCGAAATTCCACGGTTGACGTTGAGCTTTACGGCGGCGGTTGTGCCGCCGGGTGTGGCGCTGGATGTGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAATTGAACTTTTGAGCACTATAAAAGCAGCTCATGGACAATGAAAACTTCCCAAAAAAACAAGAACTCAATTGGGTTTCTTCATTATATTCTTTGAAACCCATC
TCTATTGTAAAAATGGCAAGACTAATGAGAGAAATTAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCGGTGAAACTTATTGGTTGTTTTGGGTGGCTTTGTTTACACT
CTGCATAATTTCCACTGTAATTTTCTCTTGCTCCGATGGCATGTCGAAAGACCGAAATTCCACGGTTGACGTTGAGCTTTACGGCGGCGGTTGTGCCGCCGGGTGTGGCG
CTGGATGTGGTGCTTGAAAAATAGACAACCTCTGGCCTTCTTCTTTTCTTCTTCTTCTTTTTCTTCTATAGGAAACAAATTATGTTTTGGGTTTTTAAAGCCATGAGAGA
AACAGAGAGAGAGTTTGTTTTGAAGATACTGATTGACATCAATTTTGTTACATTTTCATCGTGATTTAGCAAC
Protein sequenceShow/hide protein sequence
MDNENFPKKQELNWVSSLYSLKPISIVKMARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTVIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA