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CSPI01G06990 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G06990
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Rib s in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Genome locationChr1:4403030..4404842
RNA-Seq ExpressionCSPI01G06990
SyntenyCSPI01G06990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584340.1 hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4470.12Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSV---STLRRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI
        MKRA+WGAVF   S  +S+SP L+T RS PLL  FSV   S  R YSSGNDKYN LNST  +NKDSLVDDD+S EELKRKID+FYE GD +SLPAIFEAI
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSV---STLRRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI
        LKRKLSGKH DADDELMKEIRQ++PGEVEDFK +EEYDSDL     + D     D SEEEDRR+
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI

XP_004137486.1 uncharacterized protein LOC101216147 [Cucumis sativus]1.8e-7599.35Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
        MKRALWGAVF+VYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
        SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI

XP_008461340.1 PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]2.3e-6287.74Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
        MKRALWGAVFNV S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
        SGKHEDADDELMKEIRQ++PGE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]2.6e-4570.73Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTL---RRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI
        MKRA+WGAVF V S  +S+SP L+T RS PLL PFSVS     R YS+GNDKYN LNST  +NKDSLVDDDVS EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTL---RRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI
        LKRKLSGKH DADDELMKEIRQ++PGEVEDFK +EEYDSDL     + D     D SEEEDRR+
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI

XP_038894045.1 uncharacterized protein LOC120082798 [Benincasa hispida]7.0e-5175.46Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
        MKRAL GAVFNVYS TLSVSPPLRTFRS  LLSPFS  +LR YSSGNDKYN LNSTKNKDSL++DDVSTEELKRKIDKFYE GD +SLP IFEAILKRKL
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMD--------DDSSDASDDSEEEDRRI
        SGKHED D E+MKEIRQ++PG+VED  G EEYDSDL +        +D SD+S DSE+EDRR+
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMD--------DDSSDASDDSEEEDRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LT17 Uncharacterized protein8.9e-7699.35Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
        MKRALWGAVF+VYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
        SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI

A0A1S3CEX3 uncharacterized protein LOC1034999291.1e-6287.74Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
        MKRALWGAVFNV S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
        SGKHEDADDELMKEIRQ++PGE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI

A0A5D3BIA4 Uncharacterized protein1.1e-6287.74Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL
        MKRALWGAVFNV S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
        SGKHEDADDELMKEIRQ++PGE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI

A0A6J1E804 uncharacterized protein LOC1114315721.4e-4470.12Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSV---STLRRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI
        MKRA+WGAVF   S  +S+SP L+T RS PLL  FSV   S  R YSSGNDKYN LNST  +NKDSLVDDDVS EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSV---STLRRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI
        LKRKLSGKH DADDELMKEIRQ++PGEVEDFK +EEYDSDL     + D     D SEEEDRR+
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLM----DDDSSDASDDSEEEDRRI

A0A6J1KP40 uncharacterized protein LOC1114952362.9e-4269.75Show/hide
Query:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSV---STLRRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI
        MKRA+WGAVF   S  +S+ P L+T RS PLL PFSV   S  R YSSGNDKYN LNST  +NKDSLVDD VS EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSV---STLRRYSSGNDKYNELNST--KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDD----DSSDASDDSEEEDR
        LKRKLSGKH DADDELMKEI Q++PGEVEDFK +EEYDSDL  D    D     D SEEEDR
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDD----DSSDASDDSEEEDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown8.3e-1038.78Show/hide
Query:  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED
        S  ++    ++ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  +R+     V D    ++ DSD+  D   D+SD   E D
Subjt:  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED

AT1G73770.2 FUNCTIONS IN: molecular_function unknown8.3e-1038.78Show/hide
Query:  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED
        S  ++    ++ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  +R+     V D    ++ DSD+  D   D+SD   E D
Subjt:  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial3.2e-0932.52Show/hide
Query:  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
        P L+P +     ++   + +  E ++T           K  LV +DVS +ELK +I+K++  G+ D+LP + EA+L+R+L  KH + DDEL+++I + LP
Subjt:  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP

Query:  GEVEDFKGEEEYDSDLMDDDSSD
           +D   +E+++SD  +  S+D
Subjt:  GEVEDFKGEEEYDSDLMDDDSSD

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial3.2e-0932.52Show/hide
Query:  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
        P L+P +     ++   + +  E ++T           K  LV +DVS +ELK +I+K++  G+ D+LP + EA+L+R+L  KH + DDEL+++I + LP
Subjt:  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP

Query:  GEVEDFKGEEEYDSDLMDDDSSD
           +D   +E+++SD  +  S+D
Subjt:  GEVEDFKGEEEYDSDLMDDDSSD

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial1.9e-0934.15Show/hide
Query:  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
        P L+P +     ++   + +  E ++T          +K  LV +DVS +ELK +IDK +  G+ D+LP + EA+L+R+L  KH + DDELM++I + LP
Subjt:  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP

Query:  GEVEDFKGEEEYDSDLMDDDSSD
           +D   +E+++SD  +  S+D
Subjt:  GEVEDFKGEEEYDSDLMDDDSSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGAGCTTTATGGGGAGCTGTCTTCAACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGT
TTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGA
GGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAG
CTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGA
TTCTGAGGAAGAAGATAGAAGAATATAA
mRNA sequenceShow/hide mRNA sequence
TTCGATCATAAACCCTCAGAAAATGGGTCTAAACCCTAAAACTGTAAAGAAACGCCATGAAGCGAGCTTTATGGGGAGCTGTCTTCAACGTCTATTCTGGCACGCTTTCC
GTTTCTCCTCCGCTACGAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTC
AACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTT
TCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGT
GAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAAGATAATGCGAAGCTTATAGTTTATGA
TGATGTTAGATTAGATTATTTTACGTTTTACGTGAATTCTATCCCCCAACTTTTACTTACTTCAATTCAATTGGATGGAGTGGGCTTTAGGATTATTATTTCAAATCTTT
TGTCATTAAATGTACAATTATTCACTTGGGTTTAGCACAACATTGCCATTGTATGAGATAATAATGGATTTGGTACGAAAAGAAAAAAGTTAT
Protein sequenceShow/hide protein sequence
MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDE
LMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI