CuGenDBv2

Gene ID	CSPI01G07540
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA-binding protein RHL1 isoform X2
Genome location	Chr1:4778243..4786686
RNA-Seq Expression	CSPI01G07540
Synteny	CSPI01G07540
Gene Ontology terms	GO:0042023 - DNA endoreduplication (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR038859 - DNA-binding protein RHL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ99067.1 DNA-binding protein RHL1 isoform X2 [Cucumis melo var. makuwa]

1.5e-196

91.23

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYDFNGG         AGVTSTS
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT PVRHSERSARKVFNFAEASSEDES GTD DLSEGEEKNIVIHEPSIGDHA    +DISVES
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQG
        IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKVSTQKMQLSGSKQKIDQDEGSKKRR VRGQG
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQG

XP_004137530.1 DNA-binding protein RHL1 isoform X2 [Cucumis sativus]

1.7e-235

100

Show/hide

Query:  MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL
        MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL
Subjt:  MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL

Query:  YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK
        YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK
Subjt:  YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK

Query:  QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI
        QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI
Subjt:  QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI

Query:  DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK
        DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK
Subjt:  DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK

Query:  AQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
        AQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
Subjt:  AQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

XP_008467323.1 PREDICTED: DNA-binding protein RHL1 isoform X2 [Cucumis melo]

4.5e-217

92.58

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYDFNGG         AGVTSTS
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT PVRHSERSARKVFNFAEASSEDES GTD DLSEGEEKNIVIHEPSIGDHASEKTEDISVES
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGG
        IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKVSTQKMQLSGSKQKIDQDEGSKKRR VRGQGG
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGG

Query:  KAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
        KAQ+KDTEYEVEDEIE+LSSSQEDTDEDWTS
Subjt:  KAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

XP_031744387.1 DNA-binding protein RHL1 isoform X1 [Cucumis sativus]

1.2e-233

98.85

Show/hide

Query:  MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL
        MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL
Subjt:  MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL

Query:  YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK
        YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK
Subjt:  YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK

Query:  QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI
        QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI
Subjt:  QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI

Query:  DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK
        DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK
Subjt:  DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK

Query:  AQKKDTEY-----EVEDEIEDLSSSQEDTDEDWTS
        AQKKDTEY     EVEDEIEDLSSSQEDTDEDWTS
Subjt:  AQKKDTEY-----EVEDEIEDLSSSQEDTDEDWTS

XP_038893754.1 DNA-binding protein RHL1 isoform X1 [Benincasa hispida]

6.8e-197

86.37

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSK+DEAKGEI+P IA RKRLKKLAFSNHILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFP +LT GQCGE DFNGG         AGVT  S
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGINPA ENS KGEHGDDLV L+ +VTNSIKTTPVRHSERSARKVFNFAE SSEDES  T ADLSEGEEKNIVIHEPSIGDHA EKTED+SV+S
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQ--
        +DEDA +I+PPFLEGNQTSIS EKKS  AKGSAQSDTRGLVQPTLLSLFKKVEEKRT RSSKRSS PKVS QKMQLSGSK+KIDQDEG +KRR VRGQ  
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQ--

Query:  GGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
        GGK QKKDTEYEV+D+IE+LSSSQEDTDEDWTS
Subjt:  GGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ6 Uncharacterized protein

8.0e-236

100

Show/hide

Query:  MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL
        MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL
Subjt:  MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPIL

Query:  YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK
        YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK
Subjt:  YLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSK

Query:  QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI
        QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI
Subjt:  QSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESI

Query:  DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK
        DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK
Subjt:  DEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGK

Query:  AQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
        AQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
Subjt:  AQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

A0A1S3CTA5 DNA-binding protein RHL1 isoform X2

2.2e-217

92.58

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYDFNGG         AGVTSTS
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT PVRHSERSARKVFNFAEASSEDES GTD DLSEGEEKNIVIHEPSIGDHASEKTEDISVES
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGG
        IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKVSTQKMQLSGSKQKIDQDEGSKKRR VRGQGG
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGG

Query:  KAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
        KAQ+KDTEYEVEDEIE+LSSSQEDTDEDWTS
Subjt:  KAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

A0A5D3BIX4 DNA-binding protein RHL1 isoform X2

7.3e-197

91.23

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYDFNGG         AGVTSTS
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT PVRHSERSARKVFNFAEASSEDES GTD DLSEGEEKNIVIHEPSIGDHA    +DISVES
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQG
        IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKVSTQKMQLSGSKQKIDQDEGSKKRR VRGQG
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQG

A0A6J1E8G5 DNA-binding protein RHL1-like

2.6e-186

82.26

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSK+DEAKGE+ PEIA RKRLKKLAF+N+ILSETQA+PQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CEDCFDNMIVFSDAWWIGTKDENPEE  LDFPK++TMG+CGEYDFNGG         AGV STS
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGIN A E S KGEHGDDLV LE ++TNS+KTTPVRHSERSA KVFNFA+A S++ESAGT AD SEGEEKNIVIHEPSIGDHASEKTE +SV+S
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQ-
         D+DAV+ +P FLEGN+T ISK K   RAKG+AQS  RG LVQPTL SLFKKVEEKRTPRSSKRSS PKVS QKMQLSGSKQKIDQDEG KKRRVV+GQ 
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQ-

Query:  -GGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
         GGK ++KDTEYE ED+IE+LSSSQEDTDEDWTS
Subjt:  -GGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

A0A6J1KHM2 DNA-binding protein RHL1-like

1.3e-182

81.11

Show/hide

Query:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI
        MARG SSSK+DEAKGE++PEIA RKRLKKLAF+N+ILSETQA+PQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNPI
Subjt:  MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CEDCFDNMIVFSDAWWIGTKDENPEE  LDFPK++TMG+CGEYDFNGG         AGV STS
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTS

Query:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES
        KQSVQ+KGI+ A ENS K EHGDDLV LE ++TNS+KTTPVRHSERS  KVFNFA+A S++ESAGT AD SEGEEKNIVI+EPSIGDHASEKTE +SV+S
Subjt:  KQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES

Query:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQ-
         D+DAV+ +P FLEGN+T ISK K   RAKG+AQS  RG LVQPTL SLFKKVEEKRTPRSSKRSS PKVS QK QLSGSKQKIDQDEG KKR VV+GQ 
Subjt:  IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQ-

Query:  -GGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS
         GGK  +KDTEYE ED+IE+L SSQEDTDEDWTS
Subjt:  -GGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

SwissProt top hits

e value

%identity

Alignment

O81242 DNA-binding protein RHL1

8.4e-81

49.06

Show/hide

Query:  MARGSSSKKDEAKG--EINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNP
        M R SSSKK  +KG  + + E  +RKRLK LA  N +LS++ A+  + L PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  LSTKNP
Subjt:  MARGSSSKKDEAKG--EINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNP

Query:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTST
        +LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+D FDNMIVFS++WWIGTK+ENPEEA LDFPK+L   +  E+DF GGAG    + V  + S 
Subjt:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTST

Query:  SKQSVQRKGINPAAEN----SFKGEHGDDLVGLEASV--TNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKT
           S   +  +P  +N    S  GE  DD + +   V  T  ++ TPVR S+R++ K FNFAE SSE  S  ++ + S+ +EK ++  EP     + E++
Subjt:  SKQSVQRKGINPAAEN----SFKGEHGDDLVGLEASV--TNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKT

Query:  EDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSA
        +D     I   A K+        +   SK+ K              LVQ TL +LFKK EEK    S  +SS+
Subjt:  EDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSA

Arabidopsis top hits

e value

%identity

Alignment

AT1G48380.1 root hair initiation protein root hairless 1 (RHL1)

5.9e-82

49.06

Show/hide

Query:  MARGSSSKKDEAKG--EINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNP
        M R SSSKK  +KG  + + E  +RKRLK LA  N +LS++ A+  + L PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  LSTKNP
Subjt:  MARGSSSKKDEAKG--EINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNP

Query:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTST
        +LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+D FDNMIVFS++WWIGTK+ENPEEA LDFPK+L   +  E+DF GGAG    + V  + S 
Subjt:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTST

Query:  SKQSVQRKGINPAAEN----SFKGEHGDDLVGLEASV--TNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKT
           S   +  +P  +N    S  GE  DD + +   V  T  ++ TPVR S+R++ K FNFAE SSE  S  ++ + S+ +EK ++  EP     + E++
Subjt:  SKQSVQRKGINPAAEN----SFKGEHGDDLVGLEASV--TNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKT

Query:  EDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSA
        +D     I   A K+        +   SK+ K              LVQ TL +LFKK EEK    S  +SS+
Subjt:  EDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSA

AT1G48380.2 root hair initiation protein root hairless 1 (RHL1)

4.4e-77

45.3

Show/hide

Query:  MARGSSSKKDEAKG--EINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNP
        M R SSSKK  +KG  + + E  +RKRLK LA  N +LS++ A+  + L PS  VLKHHG DI++KSQRKNRFLFSF GLLAP+S   IG+L  LSTKNP
Subjt:  MARGSSSKKDEAKG--EINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNP

Query:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLT---------------------------
        +LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+D FDNMIVFS++WWIGTK+ENPEEA LDFPK+L                            
Subjt:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLT---------------------------

Query:  ----MGQCGEYDFNGGAGVTSTSGVAGVTSTSKQSVQRKGINPAAEN----SFKGEHGDDLVGLEASV--TNSIKTTPVRHSERSARKVFNFAEASSEDE
              +  E+DF GGAG    + V  + S    S   +  +P  +N    S  GE  DD + +   V  T  ++ TPVR S+R++ K FNFAE SSE  
Subjt:  ----MGQCGEYDFNGGAGVTSTSGVAGVTSTSKQSVQRKGINPAAEN----SFKGEHGDDLVGLEASV--TNSIKTTPVRHSERSARKVFNFAEASSEDE

Query:  SAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSK
        S  ++ + S+ +EK ++  EP     + E+++D     I   A K+        +   SK+ K              LVQ TL +LFKK EEK    S  
Subjt:  SAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSK

Query:  RSSA
        +SS+
Subjt:  RSSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGCGAGGATCGTCTTCAAAGAAGGACGAAGCAAAAGGAGAAATCAACCCAGAGATTGCAGAGCGAAAGCGGCTCAAGAAGCTCGCATTCTCCAATCACATACTTTC
AGAAACCCAGGCAAGGCCCCAGGCTTATCTGAGCCCTTCAGCCACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCACAGCGAAAGAACAGGTTCCTCTTCT
CCTTTTCAGGCTTGCTTGCTCCCGTTAGTGGTGGCAAGATTGGCGAGCTCAAGGATTTATCAACCAAGAATCCCATTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAG
TTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTAACTTTGCAGTTTTCTAGAGGTGGAAAGAATGTGACGTGTGAAGATTGTTTTGATAATATGATTGTCTTTTC
TGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAGGCGTGTCTTGATTTTCCTAAAGATTTGACCATGGGACAATGTGGAGAATATGACTTTAACGGTGGTG
CTGGTGTTACTAGTACGAGTGGGGTTGCTGGTGTTACCAGTACGAGTAAGCAGAGTGTTCAAAGGAAGGGAATCAATCCTGCTGCAGAAAATTCCTTTAAAGGAGAGCAT
GGAGATGATTTAGTGGGCCTTGAAGCCAGCGTGACAAATTCAATAAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCAGAAAAGTATTCAATTTTGCAGAGGCTTC
TTCTGAGGATGAGTCTGCTGGCACGGACGCTGATTTGTCTGAAGGAGAAGAAAAAAATATTGTCATACATGAGCCTTCAATTGGAGATCATGCTAGTGAAAAGACGGAAG
ATATCTCTGTTGAATCTATAGATGAAGATGCTGTGAAAATTAAACCTCCTTTTCTTGAAGGAAATCAGACATCAATTTCTAAGGAAAAGAAAAGTTTTCGGGCTAAGGGA
AGTGCTCAGAGTGATACTCGTGGACTTGTCCAGCCTACTTTACTTAGTTTGTTCAAGAAAGTGGAGGAGAAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAGCTCCCAA
AGTTTCTACCCAAAAGATGCAGCTGTCTGGTTCAAAGCAAAAGATTGACCAGGATGAAGGATCAAAGAAAAGGAGGGTTGTCCGGGGACAAGGAGGAAAAGCCCAGAAGA
AGGATACAGAATATGAGGTTGAAGATGAGATCGAAGATTTGTCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGA

mRNA sequence

Show/hide mRNA sequence

GAAGAATTGAGAAAAAGAAAAAAATAATGAAAGAGGAAACAAGAGGGCAGGGATCCCGGAGAGTAAACTGCAGTTGGTAGCTGACTACAAGCAACAGAAATGGCGCGAGG
ATCGTCTTCAAAGAAGGACGAAGCAAAAGGAGAAATCAACCCAGAGATTGCAGAGCGAAAGCGGCTCAAGAAGCTCGCATTCTCCAATCACATACTTTCAGAAACCCAGG
CAAGGCCCCAGGCTTATCTGAGCCCTTCAGCCACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCACAGCGAAAGAACAGGTTCCTCTTCTCCTTTTCAGGC
TTGCTTGCTCCCGTTAGTGGTGGCAAGATTGGCGAGCTCAAGGATTTATCAACCAAGAATCCCATTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAGTTGTTTGGAAC
TATCATGTATCCGAAGAACAGATATTTAACTTTGCAGTTTTCTAGAGGTGGAAAGAATGTGACGTGTGAAGATTGTTTTGATAATATGATTGTCTTTTCTGATGCATGGT
GGATTGGAACAAAAGATGAAAATCCAGAGGAGGCGTGTCTTGATTTTCCTAAAGATTTGACCATGGGACAATGTGGAGAATATGACTTTAACGGTGGTGCTGGTGTTACT
AGTACGAGTGGGGTTGCTGGTGTTACCAGTACGAGTAAGCAGAGTGTTCAAAGGAAGGGAATCAATCCTGCTGCAGAAAATTCCTTTAAAGGAGAGCATGGAGATGATTT
AGTGGGCCTTGAAGCCAGCGTGACAAATTCAATAAAGACTACGCCAGTTAGACATTCTGAAAGATCTGCCAGAAAAGTATTCAATTTTGCAGAGGCTTCTTCTGAGGATG
AGTCTGCTGGCACGGACGCTGATTTGTCTGAAGGAGAAGAAAAAAATATTGTCATACATGAGCCTTCAATTGGAGATCATGCTAGTGAAAAGACGGAAGATATCTCTGTT
GAATCTATAGATGAAGATGCTGTGAAAATTAAACCTCCTTTTCTTGAAGGAAATCAGACATCAATTTCTAAGGAAAAGAAAAGTTTTCGGGCTAAGGGAAGTGCTCAGAG
TGATACTCGTGGACTTGTCCAGCCTACTTTACTTAGTTTGTTCAAGAAAGTGGAGGAGAAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAGCTCCCAAAGTTTCTACCC
AAAAGATGCAGCTGTCTGGTTCAAAGCAAAAGATTGACCAGGATGAAGGATCAAAGAAAAGGAGGGTTGTCCGGGGACAAGGAGGAAAAGCCCAGAAGAAGGATACAGAA
TATGAGGTTGAAGATGAGATCGAAGATTTGTCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGAGGTTGTTACCATTCTAACAATGGTAAGCCACACCAGCA
GCTCGAATTGCATCATTGCAGGGATTATATTCAGAATTCAGAATGCTCGAATTGCTCTACCAGGTTCTTTGATGCCGCTGGCTAATTGAAATTAAAGAAATTTGACCATA
AGATGATATTGAAAAGTTTTTATCATAAAGTTAGGCAATGTAAAATTATGTTTTTTATATACTTGAGAGATCAACTGTTACACTTCCTAGAAACCAGACCAAGTTTAAGG
TTAAAAATATTCACAAGATTTTATGCAGATTGTTGTGCCTTTGGA

Protein sequence

Show/hide protein sequence

MARGSSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPILYLDFPQGRMK
LFGTIMYPKNRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAGVTSTSGVAGVTSTSKQSVQRKGINPAAENSFKGEH
GDDLVGLEASVTNSIKTTPVRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKG
SAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGKAQKKDTEYEVEDEIEDLSSSQEDTDEDWTS

CSPI01G07540 (gene) of Cucumber (PI 183967) v1 genome